; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G01330 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G01330
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTranscription factor like
Genome locationClcChr08:2231957..2241765
RNA-Seq ExpressionClc08G01330
SyntenyClc08G01330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592354.1 hypothetical protein SDJN03_14700, partial [Cucurbita argyrosperma subsp. sororia]8.4e-5079.84Show/hide
Query:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ
        M+KT  ESK CTDS+R+LFDRRYGWVIDEWK+PS+EALAGGRGMFCI PLAKTLVNSV QMVNIAA STVK +ENPELLSPQVLQAGL QRLEKF SS+Q
Subjt:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ

Query:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE
          AF  GF KVTSPSVST+S HL DER++
Subjt:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE

XP_022925399.1 uncharacterized protein LOC111432700 [Cucurbita moschata]1.3e-5081.4Show/hide
Query:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ
        M+KTFTESK CTDS+RLLFDRRYGWVIDEWK+PS EALAGGRGMFCI PLAKTLVNSV QMVNIAA STVK +ENPELLSPQVLQAGL QRLEKF SS+Q
Subjt:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ

Query:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE
          AF  GF KVTSPSV T+S HL DER++
Subjt:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE

XP_022973473.1 uncharacterized protein LOC111472022 [Cucurbita maxima]3.2e-4980.62Show/hide
Query:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ
        M+KTFTESK CTDSKRLLFDRRYGWVIDEWK+PS EALAGGRGMFCI PLAKTLVNSV QMVNIAA STVK +ENPELLSPQVLQAGL QRLEKF SS+Q
Subjt:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ

Query:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE
          AF  G  +VTSPSV T+S HL DE I+
Subjt:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE

XP_023535526.1 uncharacterized protein LOC111796939 isoform X1 [Cucurbita pepo subsp. pepo]3.2e-4979.84Show/hide
Query:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ
        M+KTFTESK CTDS+RLLFDRRYGWVIDEWK+PS EALAGGRGMFCI PLAKTLVNSV QMVNIAA ST K +ENPELLSPQVLQA L QRLEKF SS+Q
Subjt:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ

Query:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE
          AF  GF +VTSPSV T+S HL DERI+
Subjt:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE

XP_038889417.1 uncharacterized protein LOC120079329 isoform X1 [Benincasa hispida]1.7e-5890.7Show/hide
Query:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ
        MEK+FTESK CT+SKRLLFDRRYGWVIDEWKDPS+EALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVK +ENPELLSPQVLQ GL QRLEKFTSSIQ
Subjt:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ

Query:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE
        NSAFH GFQKVTSPSVST+S HLHDERI+
Subjt:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE

TrEMBL top hitse value%identityAlignment
A0A0A0KUT1 Uncharacterized protein1.5e-4981.4Show/hide
Query:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ
        ME+ FT       SKRLLFDRRYGWVIDEWKDPS+EALAGGRGMFCIVPL K+LVNSVTQMVNIA +STVK VENPELLSPQVLQAGL Q LEKFTSSIQ
Subjt:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ

Query:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE
        NS FHLGFQKVT+PSVST S HL DE+I+
Subjt:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE

A0A1S3CAM7 uncharacterized protein LOC1034986703.4e-4981.4Show/hide
Query:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ
        ME+ FT       SKRLLFDRRYGWVIDEWKDPS+EALAGGRGMFCIVPL K+LVNSVTQMVN+AAISTVK VENPELLSPQVLQAGL++RLEKFTSSIQ
Subjt:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ

Query:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE
        NS F LGFQKVT+PSVST S HL DE+I+
Subjt:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE

A0A6J1EC20 uncharacterized protein LOC1114327006.2e-5181.4Show/hide
Query:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ
        M+KTFTESK CTDS+RLLFDRRYGWVIDEWK+PS EALAGGRGMFCI PLAKTLVNSV QMVNIAA STVK +ENPELLSPQVLQAGL QRLEKF SS+Q
Subjt:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ

Query:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE
          AF  GF KVTSPSV T+S HL DER++
Subjt:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE

A0A6J1IB95 uncharacterized protein LOC111471949 isoform X25.1e-4576.86Show/hide
Query:  KGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQNSAFHLGF
        K  T+SKRLLFDRRYGWVIDEWKDP++EALAGGRGMFCIVPLAKTLVNSVTQM NIAA S VK +E PELLSPQVLQAGL +R+EKF  S+QNSAFH G 
Subjt:  KGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQNSAFHLGF

Query:  QKVTSPSVSTTSFHLHDERIE
        QK  SPS +T+S  LHDER++
Subjt:  QKVTSPSVSTTSFHLHDERIE

A0A6J1ID54 uncharacterized protein LOC1114720221.5e-4980.62Show/hide
Query:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ
        M+KTFTESK CTDSKRLLFDRRYGWVIDEWK+PS EALAGGRGMFCI PLAKTLVNSV QMVNIAA STVK +ENPELLSPQVLQAGL QRLEKF SS+Q
Subjt:  MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQ

Query:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE
          AF  G  +VTSPSV T+S HL DE I+
Subjt:  NSAFHLGFQKVTSPSVSTTSFHLHDERIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21195.1 unknown protein8.1e-1975Show/hide
Query:  SKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIA
        S+RLLFDRRYGWV+DEWKDPS+EALAGGRGMFC+VPL KTL  + +Q +N A
Subjt:  SKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIA

AT2G21195.2 unknown protein2.4e-1070.27Show/hide
Query:  IDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVN
        +DEWKDPS+EALAGGRGMFC+VPL KTL  + +Q V+
Subjt:  IDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVN

AT2G21195.3 unknown protein1.1e-1069.23Show/hide
Query:  IDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIA
        +DEWKDPS+EALAGGRGMFC+VPL KTL  + +Q +N A
Subjt:  IDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAACTTTTACGGAATCCAAAGGATGCACAGACTCCAAACGCCTTCTCTTCGATCGTCGCTACGGTTGGGTGATTGATGAATGGAAAGACCCTTCGAAAGAAGC
TTTGGCCGGCGGCCGAGGAATGTTCTGCATAGTGCCCCTCGCGAAAACTCTGGTTAACTCAGTCACACAGATGGTTAATATTGCAGCAATATCCACAGTTAAAGTTGTTG
AAAATCCAGAGCTACTTTCACCTCAGGTACTACAAGCAGGTCTGCGTCAAAGGCTTGAGAAATTCACATCGTCCATTCAAAACTCAGCATTTCACCTTGGCTTCCAGAAA
GTAACTTCTCCTTCAGTTTCTACTACTTCCTTCCATCTACACGATGAAAGAATTGAATGA
mRNA sequenceShow/hide mRNA sequence
AGTCAATCTGCATTGAGGTTCTATTTTGTATTTTCAAACAAATGACCTAAGGAAATGTCAAAAATTAAATTAATAAAAAAAATTTTAAAAAAAAATTAAAAAAACCTCAA
CTTTTAAAAATGGGCGACTTTCATTTTCGGTCCCACTTTTTTGGGTCATCCATCCACCGGACCCAGGACTCCTTTCTGAGCAGTTCCACGGTGTTGAGCAGAGAGCAGAA
CACTCACAACCAATAGTGAGGAGAAAAAATGGAGAAAACTTTTACGGAATCCAAAGGATGCACAGACTCCAAACGCCTTCTCTTCGATCGTCGCTACGGTTGGGTGATTG
ATGAATGGAAAGACCCTTCGAAAGAAGCTTTGGCCGGCGGCCGAGGAATGTTCTGCATAGTGCCCCTCGCGAAAACTCTGGTTAACTCAGTCACACAGATGGTTAATATT
GCAGCAATATCCACAGTTAAAGTTGTTGAAAATCCAGAGCTACTTTCACCTCAGGTACTACAAGCAGGTCTGCGTCAAAGGCTTGAGAAATTCACATCGTCCATTCAAAA
CTCAGCATTTCACCTTGGCTTCCAGAAAGTAACTTCTCCTTCAGTTTCTACTACTTCCTTCCATCTACACGATGAAAGAATTGAATGACAGTTAGTTGAATGGAAATTGG
TCTCACTTGAGGCTAGAGATTAAAGTACCATTTCGTTTTTTGTTTTTGGTTTTTGAAAATTAAGTCTATTTCTTCACCTTTTCTTGTAATGGTTTCCATCTTACTTGAGT
ACAAAAGTTGAATTTTTAGCCAA
Protein sequenceShow/hide protein sequence
MEKTFTESKGCTDSKRLLFDRRYGWVIDEWKDPSKEALAGGRGMFCIVPLAKTLVNSVTQMVNIAAISTVKVVENPELLSPQVLQAGLRQRLEKFTSSIQNSAFHLGFQK
VTSPSVSTTSFHLHDERIE