CuGenDBv2

Gene ID	Clc08G01465
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	ATP synthase subunit 9, mitochondrial
Genome location	ClcChr08:2450194..2453088
RNA-Seq Expression	Clc08G01465
Synteny	Clc08G01465
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0008289 - lipid binding (molecular function) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR000454 - ATP synthase, F0 complex, subunit C IPR038662 - F1F0 ATP synthase subunit C superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AAM15515.1 hypothetical protein [Arabidopsis thaliana]

2.1e-08

44.85

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARNSANKNHS----------------ERLWGFEGWVMDF------SFFLKKNSG-------NTSS
        MLEGAKS+G GA TIA AGAA+ I NVFSSLIHSVARN +    S                  L GF  +  D       +F +  +SG         SS
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARNSANKNHS----------------ERLWGFEGWVMDF------SFFLKKNSG-------NTSS

Query:  ELFTYTFDLA-NLANSGRSESTSSINQSIPSVEQAW
        E FTYT D+  + A+SGR  ++SS+NQ IP  EQAW
Subjt:  ELFTYTFDLA-NLANSGRSESTSSINQSIPSVEQAW

AQK77819.1 ATPase subunit 9 [Lophophytum mirabile subsp. bolivianum]

9.7e-06

89.47

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAKSMG GA TIALAGAAV I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

YP_002608218.2 ATPase subunit 9 [Carica papaya]

9.7e-06

89.47

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAKSMG GA TIALAGAAV I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

YP_009731005.1 ATP synthase F0 subunit 9 [Epirixanthes elongata]

9.7e-06

89.47

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAKSMG GA TIALAGAAV I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

YP_009941496.1 ATP synthase subunit 9 [Fagus sylvatica]

9.7e-06

89.47

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAKSMG GA TIALAGAAV I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

TrEMBL top hits

e value

%identity

Alignment

A0A3G6XMK2 ATP synthase subunit 9, mitochondrial

4.7e-06

89.47

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAKSMG GA TIALAGAAV I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

A0A6B7FHA0 ATP synthase subunit 9, mitochondrial

4.7e-06

89.47

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAKSMG GA TIALAGAAV I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

A0A7L7T959 ATP synthase subunit 9, mitochondrial

4.7e-06

89.47

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAKSMG GA TIALAGAAV I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

B9U3N7 ATP synthase subunit 9, mitochondrial

4.7e-06

89.47

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAKSMG GA TIALAGAAV I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

G9FCM4 ATP synthase subunit 9, mitochondrial

4.7e-06

89.47

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAKSMG GA TIALAGAAV I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

SwissProt top hits

e value

%identity

Alignment

P60114 ATP synthase subunit 9, mitochondrial

8.2e-08

84.21

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAK MG GA TIALAGAA+ I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

P60115 ATP synthase subunit 9, mitochondrial

8.2e-08

84.21

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAK MG GA TIALAGAA+ I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

P60116 ATP synthase subunit 9, mitochondrial

8.2e-08

84.21

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAK MG GA TIALAGAA+ I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

P60117 ATP synthase subunit 9, mitochondrial

8.2e-08

84.21

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAK MG GA TIALAGAA+ I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

P60118 ATP synthase subunit 9, mitochondrial

8.2e-08

84.21

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAK MG GA TIALAGAA+ I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

Arabidopsis top hits

e value

%identity

Alignment

AT2G07671.1 ATP synthase subunit C family protein

1.7e-08

81.58

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAKS+G GA TIA AGAA+ I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

ATMG00040.1 ATP synthase subunit C family protein

2.9e-08

35.06

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN-------------------SANKNHSERL---------------------------------
        MLEGAKS+G GA TIA AGAA+ I NVFSSLIHSVARN                   +A   HS RL                                 
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN-------------------SANKNHSERL---------------------------------

Query:  ----------WGFEGWVMDFSFFLKKNSGNTSSELFTYTFDLANLANSGRSESTSSINQSIPSVEQAWTLNVAP
                  W   G   +       N  ++ SE FTYT DL + A+SGR  ++SS+NQ I   EQA   N  P
Subjt:  ----------WGFEGWVMDFSFFLKKNSGNTSSELFTYTFDLANLANSGRSESTSSINQSIPSVEQAWTLNVAP

ATMG01080.1 mitochondrial F0-ATPase subunit 9

1.7e-08

81.58

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Query:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN
        MLEGAKS+G GA TIA AGAA+ I NVFSSLIHSVARN
Subjt:  MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARN

Sequences

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CDS sequence

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ATGTTAGAAGGTGCAAAATCAATGGGTGTCGGAGCTACTACAATTGCTTTAGCGGGAGCTGCTGTCAGTATTAGAAACGTGTTCAGTTCTTTGATCCATTCCGTGGCGCG
AAATTCGGCTAACAAAAATCATTCTGAGCGCTTATGGGGTTTCGAGGGGTGGGTCATGGATTTCTCCTTTTTTTTAAAAAAAAACTCGGGCAACACCTCTTCTGAATTGT
TTACCTATACCTTCGATTTGGCAAATTTGGCCAATTCTGGGCGTAGTGAAAGTACCTCATCGATCAATCAATCGATTCCAAGTGTTGAGCAAGCATGGACTTTGAATGTG
GCACCCGTTGAAGTAGGTTGTGAATTGCCTTTCCTCGTTAGAACAACCAGAAGGGTAGAGCTCTATGTTCACCCTTTAGAGTTAGCCACGAGGCAACAACCTCTGATGCC
CCACACCATTGCGGTTGGAGGGGAGTGCAACGACTTAGCCCAAACTCACTTAGATGAAGCTGCAAGAAAGAAGAAAGTTGACCTTGTAGAGAAGCAGATAGAAGAAACCA
AACCGACCTTGAGAGGAACATGCCTGATTGGGAATCGAAATGTGGGCTTCTTCCGATCAGTTCATAGACCAAGAAAGAATTTAGCTACTTACAGGGATGCTGAAACAAAA
GCTTCATTTGCTGTCGTGCAGTCTGAACAAGTTTCAGTGTTTAGTGAATATCGAGCGGAAGAGTTAGAGTTTAAAGCTGAAATTTTGGGGTTAGTGGAACTGACTGGTAC
GAATTTCTCCACTAATCTGGAGCAGGGCGAACTAGAAGTTTGGGAGGTAGTAAGAATAGCAGCAGAAAGAAGCAGGTCTTGCTGGAAATGTTAA

mRNA sequence

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Protein sequence

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MLEGAKSMGVGATTIALAGAAVSIRNVFSSLIHSVARNSANKNHSERLWGFEGWVMDFSFFLKKNSGNTSSELFTYTFDLANLANSGRSESTSSINQSIPSVEQAWTLNV
APVEVGCELPFLVRTTRRVELYVHPLELATRQQPLMPHTIAVGGECNDLAQTHLDEAARKKKVDLVEKQIEETKPTLRGTCLIGNRNVGFFRSVHRPRKNLATYRDAETK
ASFAVVQSEQVSVFSEYRAEELEFKAEILGLVELTGTNFSTNLEQGELEVWEVVRIAAERSRSCWKC

Clc08G01465 (gene) of Watermelon (cordophanus) v2 genome