; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G01870 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G01870
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRNA-binding protein 24
Genome locationClcChr08:3556420..3561283
RNA-Seq ExpressionClc08G01870
SyntenyClc08G01870
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656046.1 RNA-binding protein 24 isoform X1 [Cucumis sativus]1.2e-15297.2Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL
        STPKHEKKKWELT GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYN+YGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL

Query:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_016902398.1 PREDICTED: RNA-binding protein 24 isoform X3 [Cucumis melo]2.1e-14694.41Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL
        STPKH         GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYN+YGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL

Query:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_022157230.1 RNA-binding protein 24 isoform X1 [Momordica charantia]5.6e-14792.12Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+NLA+QFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSG
        STPKHEKKKWELT  GGGGGRNFRVLSSFQ+GFGGNVGSAFHS  TFPHYA+QQGIPYN+YGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGI++G
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSG

Query:  AAAAAAAFYPYFQFGEGSGGG-------GSGQQ-GYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        AAAAAAAFYPYFQFGEGSGGG       GSGQQ GYGVQYPHHLFQYSAAINS +AT+FPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  AAAAAAAFYPYFQFGEGSGGG-------GSGQQ-GYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_022930178.1 RNA-binding protein 38 isoform X1 [Cucurbita moschata]9.5e-14792.76Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSN+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSG
        STPKHEKKKWELT  GGGGGRNFRVLSSFQTGFGGNVGSAFHS  TFPHYAI QGIPYN+YGYSSYSPDY YPTSYYNVYGGATAQYPMYGTGPGGILSG
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSG

Query:  AAAAAAAFYPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        AAAAAAAFYPYFQFGEGSGG      GGSGQQGYGVQYPHHL QYSAA+NST  TTFPQHYAAPPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  AAAAAAAFYPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_038890037.1 RNA-binding protein 24 isoform X1 [Benincasa hispida]1.8e-15396.19Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGG----GGRNFRVLSS-FQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPG
        STPKHEKKKWELTGGGGG    GGRNFRVLSS FQTGFGGNVGSAFHSPTTFPHYAI QGIPYN+YGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPG
Subjt:  STPKHEKKKWELTGGGGG----GGRNFRVLSS-FQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPG

Query:  GILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        GILSGAAAAAAAFYPYFQFGEGSGGGGSGQ GYGVQYPHHLFQYS AINS+AATTF QHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  GILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

TrEMBL top hitse value%identityAlignment
A0A1S4E2E1 RNA-binding protein 24 isoform X15.6e-15397.2Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL
        STPKHEKKKWELT GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYN+YGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL

Query:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A1S4E2E8 RNA-binding protein 24 isoform X31.0e-14694.41Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL
        STPKH         GGGGG  NFRVLSS FQ+GFGGNVGSAFHSP TTFPHYAIQQGIPYN+YGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSS-FQTGFGGNVGSAFHSP-TTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIL

Query:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  SGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A6J1DSJ0 RNA-binding protein 24 isoform X12.7e-14792.12Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+NLA+QFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSG
        STPKHEKKKWELT  GGGGGRNFRVLSSFQ+GFGGNVGSAFHS  TFPHYA+QQGIPYN+YGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGI++G
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSG

Query:  AAAAAAAFYPYFQFGEGSGGG-------GSGQQ-GYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        AAAAAAAFYPYFQFGEGSGGG       GSGQQ GYGVQYPHHLFQYSAAINS +AT+FPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  AAAAAAAFYPYFQFGEGSGGG-------GSGQQ-GYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A6J1EUB1 RNA-binding protein 38 isoform X14.6e-14792.76Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSN+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSG
        STPKHEKKKWELT  GGGGGRNFRVLSSFQTGFGGNVGSAFHS  TFPHYAI QGIPYN+YGYSSYSPDY YPTSYYNVYGGATAQYPMYGTGPGGILSG
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSG

Query:  AAAAAAAFYPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        AAAAAAAFYPYFQFGEGSGG      GGSGQQGYGVQYPHHL QYSAA+NST  TTFPQHYAAPPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  AAAAAAAFYPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A6J1IGG9 RNA-binding protein 38 isoform X14.6e-14792.76Show/hide
Query:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPSN+ASQFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSG
        STPKHEKKKWELT  GGGGGRNFRVLSSFQTGFGGNVGSAFHS  TFPHYAI QGIPYN+YGYSSYSPDY YPTSYYNVYGGATAQYPMYGTGPGGILSG
Subjt:  STPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSG

Query:  AAAAAAAFYPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
        AAAAAAAFYPYFQFGEGSGG      GGSGQQGYGVQYPHHL QYSAA+NST  TTFPQHYAAPPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  AAAAAAAFYPYFQFGEGSGG------GGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR

SwissProt top hitse value%identityAlignment
Q5ZJX4 RNA-binding protein 386.8e-2339.72Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTT+TK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTF-------PHYAIQQG-------IPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGI
                        S QTGF   +G     P          PHY   Q        IP  V   +S   DYT  +  Y+ Y   TA Y  Y       
Subjt:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTF-------PHYAIQQG-------IPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGI

Query:  LSGAAAAAAAFYPY
           AA+ AA F  Y
Subjt:  LSGAAAAAAAFYPY

Q6P8A7 RNA-binding protein 243.1e-2337.65Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQ---GIP-YNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAA
                    R++   Q GF   V           H A+ Q   GIP + VY ++   P    P         +T+ Y  Y +      S AAAAAAA
Subjt:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQ---GIP-YNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAA

Query:  FYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQH
        +  Y      +  G     GYG   P  L   +    + AA  F Q+
Subjt:  FYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQH

Q76LC6 RNA-binding protein 245.2e-2337.6Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQ--GIP-YNVYGYSSYSPDYTYP------------TSYYNVYGGATAQYPMYGTGPGG
                    RV+   Q GF       F  P   P + IQ+  GIP + VY  +   P    P            + Y +  G A AQY    T    
Subjt:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQ--GIP-YNVYGYSSYSPDYTYP------------TSYYNVYGGATAQYPMYGTGPGG

Query:  ILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQH
            AAAAA   YPY      +G   +   GY +Q P  L   +    + AA  F Q+
Subjt:  ILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQH

Q9BX46 RNA-binding protein 246.8e-2338.91Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG   +KP           
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF--Y
        +   G   G      +  Q  FG        +   +P   +Q G+   V  +   +      T Y +  G A AQY           + AAAAAAA+  Y
Subjt:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAF--Y

Query:  PYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAA
        PY      +G   +G  GY VQ P      +AA   TAA
Subjt:  PYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAA

Q9M1S3 Probable RNA-binding protein ARP18.6e-2637.5Show/hide
Query:  TPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPS
        T +N+   FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGYGFVTF++  AA RAC D+ P+I+GRRANCNLASLG +  K  
Subjt:  TPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPS

Query:  TPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQ----QGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGI
        T    ++      G   G R      +     G +  S ++ P+ F +   Q    Q +P+  YGY S    Y  P   +N   G      M G      
Subjt:  TPKHEKKKWELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQ----QGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGI

Query:  LSGAAAAAAAFYPYFQFGEG--SGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPP
            +     +Y +  +G G    G  S    +   YP+H  Q         A  FPQ   + P+S   TPP
Subjt:  LSGAAAAAAAFYPYFQFGEG--SGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPP

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.5e-6154.41Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA
            GGGG   N RV +S+ QTGFG         P TF HY     +P N++GYS YSPDY ++PT+ Y +YG  +  QY +YG     GG L+ AAA+A
Subjt:  ELTGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA

Query:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSL-------PPTPPTLP
          FYP        GG G  Q      + HHL  Y+           P HY+ P  S+       P  PP +P
Subjt:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSL-------PPTPPTLP

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-6156.03Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA
            GGGG   N RV +S+ QTGFG         P TF HY     +P N++GYS YSPDY ++PT+ Y +YG  +  QY +YG     GG L+ AAA+A
Subjt:  ELTGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA

Query:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSL
          FYP        GG G  Q      + HHL  Y+           P HY+ P  S+
Subjt:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSL

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein9.4e-6053.26Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA
            GGGG   N RV +S+ QTGFG         P TF HY     +P N++GYS YSPDY ++PT+ Y +YG  +  QY +YG     GG L+ AAA+A
Subjt:  ELTGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGILSGAAAAA

Query:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPI
          FYP        GG G  Q      + HHL  Y+           P HY+ P  S+        S  T +   P+
Subjt:  AAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPI

AT1G33470.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-6958.15Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H      
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPY-NVYGYSSYSPDYTYPT-SYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFY
            G  GGR  +V S F+T F G   +A  SP  F HY     +PY N +G+SSYS DY YPT SYYNVYGGATAQ+PMYG+GP  +   AAA AA FY
Subjt:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPY-NVYGYSSYSPDYTYPT-SYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFY

Query:  PYFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP
        PY QF EG+G       GY  + YP+H+F YSA         +P H+   P+SL P+ P +PS V  A+P
Subjt:  PYFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP

AT1G33470.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-7058.36Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H      
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPY-NVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYP
            G  GGR  +V S F+T F G   +A  SP  F HY     +PY N +G+SSYS DY YPTSYYNVYGGATAQ+PMYG+GP  +   AAA AA FYP
Subjt:  LTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPY-NVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYP

Query:  YFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP
        Y QF EG+G       GY  + YP+H+F YSA         +P H+   P+SL P+ P +PS V  A+P
Subjt:  YFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCATCTAACTTGGCAAGTCAGTTTGGGGATACCACTTACACAAAAGTTTTTGTGGGTGGTTTGGCTTGGGAGACCCACAAAGATACTATGAAGAAATACTTTGA
ACAATTTGGCGATATCTTGGAGGCTGTTGTTATTACCGACAAAGCCACTGGACGATCCAAAGGCTATGGATTTGTCACGTTCCGAGAACCCGATGCTGCCATGAGAGCTT
GCGTTGATGCTGCTCCGGTCATCGACGGCCGAAGAGCCAATTGCAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCCTCCACGCCTAAGCACGAAAAAAAGAAATGG
GAATTGACAGGAGGAGGAGGAGGTGGTGGAAGAAACTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCAACAACTTT
CCCTCATTATGCCATCCAGCAAGGGATCCCCTACAATGTCTATGGGTACTCTTCCTATTCGCCCGACTACACTTACCCTACGAGCTATTACAATGTTTACGGCGGGGCAA
CTGCACAGTACCCCATGTACGGTACGGGTCCCGGCGGCATATTGAGCGGAGCGGCAGCGGCGGCAGCAGCATTCTACCCATATTTCCAATTCGGGGAAGGCAGCGGTGGC
GGCGGTTCGGGGCAGCAAGGGTATGGGGTTCAGTACCCTCACCATCTGTTTCAGTACTCAGCGGCCATTAATTCAACTGCTGCAACGACCTTCCCTCAGCACTATGCTGC
TCCTCCTATGTCTCTGCCTCCCACGCCCCCCACCTTGCCATCAGGCGTAACCATGGCTCTTCCTGCACCAATCCCACATCGTTAG
mRNA sequenceShow/hide mRNA sequence
GGAAGATCATGACTCCATCTAACTTGGCAAGTCAGTTTGGGGATACCACTTACACAAAAGTTTTTGTGGGTGGTTTGGCTTGGGAGACCCACAAAGATACTATGAAGAAA
TACTTTGAACAATTTGGCGATATCTTGGAGGCTGTTGTTATTACCGACAAAGCCACTGGACGATCCAAAGGCTATGGATTTGTCACGTTCCGAGAACCCGATGCTGCCAT
GAGAGCTTGCGTTGATGCTGCTCCGGTCATCGACGGCCGAAGAGCCAATTGCAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCCTCCACGCCTAAGCACGAAAAAA
AGAAATGGGAATTGACAGGAGGAGGAGGAGGTGGTGGAAGAAACTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCA
ACAACTTTCCCTCATTATGCCATCCAGCAAGGGATCCCCTACAATGTCTATGGGTACTCTTCCTATTCGCCCGACTACACTTACCCTACGAGCTATTACAATGTTTACGG
CGGGGCAACTGCACAGTACCCCATGTACGGTACGGGTCCCGGCGGCATATTGAGCGGAGCGGCAGCGGCGGCAGCAGCATTCTACCCATATTTCCAATTCGGGGAAGGCA
GCGGTGGCGGCGGTTCGGGGCAGCAAGGGTATGGGGTTCAGTACCCTCACCATCTGTTTCAGTACTCAGCGGCCATTAATTCAACTGCTGCAACGACCTTCCCTCAGCAC
TATGCTGCTCCTCCTATGTCTCTGCCTCCCACGCCCCCCACCTTGCCATCAGGCGTAACCATGGCTCTTCCTGCACCAATCCCACATCGTTAGAGACAACAGTTCTCATC
ATCCTCAAGTTCCCTTCTATTTGCTTCTTGGAAGAATCACTTTAAGTTCAAAAAAAAACCAACAACTCAACCTTCGCCCTAACCATGGTTCAATCTCTTTCTCTCTTCAC
TCTAACTCAACTCATGCCTTTATAAGCATTATATATGCTTTTGGCCATTCCCAGCCCCCCATAGGGGCTACCTCAAAACCAACCATACCAAATCTCACCTCCTAAATTGG
AGCAAAATCATGCATTTCTATTTTTTTTTAATTATTATTATTCATATTAATTAGGTTTTAGTGAAACCAAGAAATTAAATGTGAAAGTGGTTCCTTTTATCAAGTGAACC
AATACCCACTTTGTGAAAAAAAATCCAAACTTAGGCCATCAAGGGAATTGGCATTAAGTTGGTAAAACTCTTCACATAGCTTTGTTTCTTAATCTTCAAAGCCTAGGAAA
GGCTGATCTTAAGGATATAACAATAAAACATTTTTCCCAAAAAAAAAAATTGTTGTATATTTTATTCTAAACACCACACCCTCCTTTTCTCTTCCATCACTTTGAAAAAA
TTGGACTGAAAAAAGGCTAATATTTTTCTCATCATCCTTGTAATTAAATTTCAATTAGGGAGTAATTAGAAGGAGAATTTTCAAGAATTGGTGGGGCAAGGCAAGGGCTA
CCCCCACCTCTTTCTTAAAATATCTAGCATTTTTTTTTTCAAGATTAGGACCAATCACCAATCTTTAAAATTTTTCCTCCCTAGGCTAGTGGATATTTTTTGTTTTTTTT
TTTTTTACAAATTAATTTAGTAATAGTTTGGTTTGGCATATTATTCCCCTTGGGGTAGGGGAATCCCAAGGGGAATAATACTAAATCTCCTTGATTAATTAACCCTTAAG
GACATTAGTTATTTCTTGTAATTAAAATTTTCACCAACAAATCGTGGTTGAACTTATGGGAGTTTACAACCTCTTTTATTTTTGGTAAACCAAAGCACAAATATTGCTTT
TGGTTTAACTTTTTCTTTTGGTGCATTTAGGTTCATAATTAGAAATTAATTAGGATTAGGTTCATGTCATCATTTTGAGATTCCATTAATGGATATTGGAAGTCTCAAAA
TAAGCATTTTGCATGTGAGCCCTTGGGAGATATTTGGGTTCCCTTTGGCTTCTTCTTTCACTAACCCTACCAACCATGGTTAGGACTTAGGTCAACTTCATTTCTCTCTC
TCTTTCTTCACCATGATGTTGCCTTTCATAATTTCTTCACTATTCCCATTTTACCCTCTTCATGTCATCCTCAATCATCTTCCTTTTGTTACTTTCACTCACTCACTCTC
TCTCTCTCTCTGTCTTTCTTCTTTTCTCCATGTGTCTGTGTGTTCAAGCACTTTCTCTTCAGGGAGTTGGTGGACCTTGGAAACACTGTTTTTAATTAATTATGTCTGTA
AAAGAAGAGCCTTTTTCTTTCCTTCTTTCTTTCTTTCTTAATGTCTTTTTATGGTTTGTAATGTAATTAGATACTTTAATTACTACCCTTTCTTTTATGTCAGGACTTCT
ACTAAGATTTGATTCTTCATCAGCTGCTCCTTTGCAGCTGCTTGAAGAATAACCTATGTACCTCAATATTAATTGCTTCTTTCTTTCTCCTTCTCTATTCTCTACGTTTT
TCTTAAACTATAATGATTTCGTCTCTTGAACTTATTTAGAATGACTTTCTCCAAGGTGCTTAGAAACATTTTCAAGCAATTAAAAAGGCGTTTGATCAGGCTTGGAAAAA
TTATTTCAAATATAAGTCATTAGTTAATTTTTAG
Protein sequenceShow/hide protein sequence
MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
ELTGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSPTTFPHYAIQQGIPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGG
GGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR