; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G02215 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G02215
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEgg cell-secreted protein 1.2-like
Genome locationClcChr08:4155823..4158847
RNA-Seq ExpressionClc08G02215
SyntenyClc08G02215
Gene Ontology termsGO:0009567 - double fertilization forming a zygote and endosperm (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008502 - Prolamin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035017.1 egg cell-secreted protein 1.2-like [Cucumis melo var. makuwa]8.6e-2474.19Show/hide
Query:  MASITFKLFFVISLLPLVVTT-------SMALDATTMTNCLNPLLQSCRNEIVMFITNNGLVVISSAYCQAILNFRRECLFEFLSSLGLTDQD
        MASI FKLFF+ISLL LV+ T       SMAL+ATT  NC NPLLQSCRNEIV FITNNGLVVI SA CQAILNFRR+CL EFL+SLG+T QD
Subjt:  MASITFKLFFVISLLPLVVTT-------SMALDATTMTNCLNPLLQSCRNEIVMFITNNGLVVISSAYCQAILNFRRECLFEFLSSLGLTDQD
KGN45861.1 hypothetical protein Csa_005369 [Cucumis sativus]3.0e-2474.19Show/hide
Query:  MASITFKLFFVISLLPLVVTT-------SMALDATTMTNCLNPLLQSCRNEIVMFITNNGLVVISSAYCQAILNFRRECLFEFLSSLGLTDQD
        MASI FKLFF++SLL LV+ T       SMAL+ATT  NC NPLLQSCRNEI+ FITNNGLVVI SA CQAILNFRRECL EFLSSLG+T QD
Subjt:  MASITFKLFFVISLLPLVVTT-------SMALDATTMTNCLNPLLQSCRNEIVMFITNNGLVVISSAYCQAILNFRRECLFEFLSSLGLTDQD
TrEMBL top hitse value%identityAlignment
A0A0A0KDK2 Prolamin_like domain-containing protein1.4e-2474.19Show/hide
Query:  MASITFKLFFVISLLPLVVTT-------SMALDATTMTNCLNPLLQSCRNEIVMFITNNGLVVISSAYCQAILNFRRECLFEFLSSLGLTDQD
        MASI FKLFF++SLL LV+ T       SMAL+ATT  NC NPLLQSCRNEI+ FITNNGLVVI SA CQAILNFRRECL EFLSSLG+T QD
Subjt:  MASITFKLFFVISLLPLVVTT-------SMALDATTMTNCLNPLLQSCRNEIVMFITNNGLVVISSAYCQAILNFRRECLFEFLSSLGLTDQD
A0A5D3BT50 Egg cell-secreted protein 1.2-like4.2e-2474.19Show/hide
Query:  MASITFKLFFVISLLPLVVTT-------SMALDATTMTNCLNPLLQSCRNEIVMFITNNGLVVISSAYCQAILNFRRECLFEFLSSLGLTDQD
        MASI FKLFF+ISLL LV+ T       SMAL+ATT  NC NPLLQSCRNEIV FITNNGLVVI SA CQAILNFRR+CL EFL+SLG+T QD
Subjt:  MASITFKLFFVISLLPLVVTT-------SMALDATTMTNCLNPLLQSCRNEIVMFITNNGLVVISSAYCQAILNFRRECLFEFLSSLGLTDQD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATTACTTTCAAGCTCTTCTTTGTCATTTCTTTGCTACCTCTTGTTGTTACTACCTCCATGGCGTTGGATGCTACGACGATGACAAATTGTTTGAACCCTTT
GCTTCAATCATGTAGGAATGAAATAGTGATGTTCATTACAAATAACGGTTTGGTCGTTATAAGTTCAGCTTATTGTCAAGCAATTCTAAATTTTCGTCGTGAGTGTTTAT
TTGAATTTCTTAGTTCATTAGGGCTTACTGACCAAGACGCTGGTTTTCGAGCTGGATCCCCAAAGAATGGAATCTTCGGTTTAAGAGCAAATTCTTCTATTCGGATTACC
AACCATGAAAGCCAAAGCTTCTTCATTTTTAGGATTCGACCATTGCTTGAGAGTGGTAGAAAACCCCATCCTTCAAATGAATCACAACATCCCCATTCTCACAAAGATTC
TGAGTCTTCAGATGAAGATGATGTTTTTAATCTAGAAAGAGCTCTAAGAAGATTGAAAGGAAGGGAATTTGATCAAGAACAAGAAGTAATCATGATAAGGATCGACCTTT
TCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATTACTTTCAAGCTCTTCTTTGTCATTTCTTTGCTACCTCTTGTTGTTACTACCTCCATGGCGTTGGATGCTACGACGATGACAAATTGTTTGAACCCTTT
GCTTCAATCATGTAGGAATGAAATAGTGATGTTCATTACAAATAACGGTTTGGTCGTTATAAGTTCAGCTTATTGTCAAGCAATTCTAAATTTTCGTCGTGAGTGTTTAT
TTGAATTTCTTAGTTCATTAGGGCTTACTGACCAAGACGCTGGTTTTCGAGCTGGATCCCCAAAGAATGGAATCTTCGGTTTAAGAGCAAATTCTTCTATTCGGATTACC
AACCATGAAAGCCAAAGCTTCTTCATTTTTAGGATTCGACCATTGCTTGAGAGTGGTAGAAAACCCCATCCTTCAAATGAATCACAACATCCCCATTCTCACAAAGATTC
TGAGTCTTCAGATGAAGATGATGTTTTTAATCTAGAAAGAGCTCTAAGAAGATTGAAAGGAAGGGAATTTGATCAAGAACAAGAAGTAATCATGATAAGGATCGACCTTT
TCTAG
Protein sequenceShow/hide protein sequence
MASITFKLFFVISLLPLVVTTSMALDATTMTNCLNPLLQSCRNEIVMFITNNGLVVISSAYCQAILNFRRECLFEFLSSLGLTDQDAGFRAGSPKNGIFGLRANSSIRIT
NHESQSFFIFRIRPLLESGRKPHPSNESQHPHSHKDSESSDEDDVFNLERALRRLKGREFDQEQEVIMIRIDLF