; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G02290 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G02290
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRING finger protein 165-like
Genome locationClcChr08:4382343..4384084
RNA-Seq ExpressionClc08G02290
SyntenyClc08G02290
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043526.1 RING finger protein 165-like protein [Cucumis melo var. makuwa]9.2e-4353.77Show/hide
Query:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHS--SVCQIMCR
        MS S +SS + SF +TPN+D  L  RFG+ SRL        II DQILQ  PS LMGE L PFSNL HP Q Q +E LV EFL SFNLHS  S  + +CR
Subjt:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHS--SVCQIMCR

Query:  KILSFARQF---DGSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEE-EEEEEMEECCVCCEDLKGKGMEVSRIPCGH-
        KILSFA QF    GSFKIEA ++++EDLI   +   E   P          GAPES IERLRK+KF+   +EEE+ +C VC E+LKG+G EVSRIPCGH 
Subjt:  KILSFARQF---DGSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEE-EEEEEMEECCVCCEDLKGKGMEVSRIPCGH-

Query:  ----CLQTLLPI
            C+ T L I
Subjt:  ----CLQTLLPI

XP_004139003.1 E3 ubiquitin-protein ligase RING1 [Cucumis sativus]2.8e-4756.22Show/hide
Query:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKI
        MSFS  S ++ SF   PN+DQ L VR   CSRLIS+S +P I+PD IL+  P TL+GEALF  SNL++P Q Q +E +V EFLRSFNL SSVC+I+   I
Subjt:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKI

Query:  LSFARQFD---GSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEA--GAGAPESVIERLRKQKFE---EEEEEEMEECCVCCEDLKGKGMEVSRIPCG
        LSFA+QFD     FKIE  +DY+++  W  E  PE LYPIS + EE     GA ES IER++KQKF+    EEEEE+ +C VCCE++K KG EV RIPCG
Subjt:  LSFARQFD---GSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEA--GAGAPESVIERLRKQKFE---EEEEEEMEECCVCCEDLKGKGMEVSRIPCG

Query:  H
        H
Subjt:  H

XP_008442291.1 PREDICTED: RING finger protein 165-like [Cucumis melo]1.8e-3055.7Show/hide
Query:  MGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDG---SFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESV
        MG+ L PFSNLRHPRQ Q ++ LV +FL SFNLHSSV + +C +ILSFA QF     SFKIEA ID++EDLI   +   E   P +        GAPES 
Subjt:  MGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDG---SFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESV

Query:  IERL-RKQKFE---EEEEEEMEECCVCCEDLKGKGMEVSRIPCGH-----CLQTLLPI
        IERL  KQKF+   +EEEEE+ +C VC E+LKGKG EVSRIPCGH     C+ T L I
Subjt:  IERL-RKQKFE---EEEEEEMEECCVCCEDLKGKGMEVSRIPCGH-----CLQTLLPI

XP_008457277.1 PREDICTED: RING finger protein 165-like [Cucumis melo]3.9e-4959.2Show/hide
Query:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKI
        MSFS  S LE SF   PN+DQ L VRFG CSRLIS+S SP IIPD IL+  P TL+GEALF  SNLR P Q Q ++ LV EFL SFNL SSVC+I+   I
Subjt:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKI

Query:  LSFARQFDGS---FKIEAKIDYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQK---FEEEEEEEMEECCVCCEDLKGKGMEVSRIPCG
        LSFA+QFD +    KIEA +D++++  W  E  PE L PIS + EE  +  GA ES IER++KQK   F EEEEEE+ +CCVCCE++K KG EV RIPCG
Subjt:  LSFARQFDGS---FKIEAKIDYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQK---FEEEEEEEMEECCVCCEDLKGKGMEVSRIPCG

Query:  H
        H
Subjt:  H

XP_038876917.1 E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida]1.4e-5965.24Show/hide
Query:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKI
        MSFS  SS+ Y F  TPNSDQ+L+VRFG CSRLISRS SPGIIPD+ILQ   ST +GEALFPF+N+R   +   +E LV  FLRSFNLHSSVCQ+M RKI
Subjt:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKI

Query:  LSFARQFD---GSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEA-------------GAGAPESVIERLRKQKFEE-EEEEEMEECCVCCEDLKGKG
        LSFA+QFD   GSFKIEA IDYM++  W ME V   L+P SII EE               AGAPES IER+RKQKF+  +EEEE  ECCVCCEDLK KG
Subjt:  LSFARQFD---GSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEA-------------GAGAPESVIERLRKQKFEE-EEEEEMEECCVCCEDLKGKG

Query:  MEVSRIPCGH
        MEVSRIPCGH
Subjt:  MEVSRIPCGH

TrEMBL top hitse value%identityAlignment
A0A0A0LHS2 RING-type domain-containing protein1.3e-4756.22Show/hide
Query:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKI
        MSFS  S ++ SF   PN+DQ L VR   CSRLIS+S +P I+PD IL+  P TL+GEALF  SNL++P Q Q +E +V EFLRSFNL SSVC+I+   I
Subjt:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKI

Query:  LSFARQFD---GSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEA--GAGAPESVIERLRKQKFE---EEEEEEMEECCVCCEDLKGKGMEVSRIPCG
        LSFA+QFD     FKIE  +DY+++  W  E  PE LYPIS + EE     GA ES IER++KQKF+    EEEEE+ +C VCCE++K KG EV RIPCG
Subjt:  LSFARQFD---GSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEA--GAGAPESVIERLRKQKFE---EEEEEEMEECCVCCEDLKGKGMEVSRIPCG

Query:  H
        H
Subjt:  H

A0A1S3C5T8 RING finger protein 165-like1.9e-4959.2Show/hide
Query:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKI
        MSFS  S LE SF   PN+DQ L VRFG CSRLIS+S SP IIPD IL+  P TL+GEALF  SNLR P Q Q ++ LV EFL SFNL SSVC+I+   I
Subjt:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKI

Query:  LSFARQFDGS---FKIEAKIDYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQK---FEEEEEEEMEECCVCCEDLKGKGMEVSRIPCG
        LSFA+QFD +    KIEA +D++++  W  E  PE L PIS + EE  +  GA ES IER++KQK   F EEEEEE+ +CCVCCE++K KG EV RIPCG
Subjt:  LSFARQFDGS---FKIEAKIDYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQK---FEEEEEEEMEECCVCCEDLKGKGMEVSRIPCG

Query:  H
        H
Subjt:  H

A0A5A7TNB0 RING finger protein 165-like protein4.5e-4353.77Show/hide
Query:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHS--SVCQIMCR
        MS S +SS + SF +TPN+D  L  RFG+ SRL        II DQILQ  PS LMGE L PFSNL HP Q Q +E LV EFL SFNLHS  S  + +CR
Subjt:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHS--SVCQIMCR

Query:  KILSFARQF---DGSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEE-EEEEEMEECCVCCEDLKGKGMEVSRIPCGH-
        KILSFA QF    GSFKIEA ++++EDLI   +   E   P          GAPES IERLRK+KF+   +EEE+ +C VC E+LKG+G EVSRIPCGH 
Subjt:  KILSFARQF---DGSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEE-EEEEEMEECCVCCEDLKGKGMEVSRIPCGH-

Query:  ----CLQTLLPI
            C+ T L I
Subjt:  ----CLQTLLPI

A0A5D3CSM6 RING finger protein 165-like1.9e-4959.2Show/hide
Query:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKI
        MSFS  S LE SF   PN+DQ L VRFG CSRLIS+S SP IIPD IL+  P TL+GEALF  SNLR P Q Q ++ LV EFL SFNL SSVC+I+   I
Subjt:  MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKI

Query:  LSFARQFDGS---FKIEAKIDYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQK---FEEEEEEEMEECCVCCEDLKGKGMEVSRIPCG
        LSFA+QFD +    KIEA +D++++  W  E  PE L PIS + EE  +  GA ES IER++KQK   F EEEEEE+ +CCVCCE++K KG EV RIPCG
Subjt:  LSFARQFDGS---FKIEAKIDYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQK---FEEEEEEEMEECCVCCEDLKGKGMEVSRIPCG

Query:  H
        H
Subjt:  H

A0A5D3CVT7 RING finger protein 165-like protein8.7e-3155.7Show/hide
Query:  MGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDG---SFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESV
        MG+ L PFSNLRHPRQ Q ++ LV +FL SFNLHSSV + +C +ILSFA QF     SFKIEA ID++EDLI   +   E   P +        GAPES 
Subjt:  MGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDG---SFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESV

Query:  IERL-RKQKFE---EEEEEEMEECCVCCEDLKGKGMEVSRIPCGH-----CLQTLLPI
        IERL  KQKF+   +EEEEE+ +C VC E+LKGKG EVSRIPCGH     C+ T L I
Subjt:  IERL-RKQKFE---EEEEEEMEECCVCCEDLKGKGMEVSRIPCGH-----CLQTLLPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTCTCTATTGCTTCATCCCTCGAATATAGTTTTCGCAGCACTCCAAACAGCGATCAAATCCTGGAAGTTCGATTTGGGCATTGCAGCCGCCTGATTTCTCGATC
TTCCTCTCCCGGAATCATTCCAGACCAAATACTGCAACATATTCCCTCAACTCTAATGGGGGAGGCTCTGTTTCCTTTCTCTAATCTGAGGCATCCTCGACAACATCAAG
GAATGGAGATTTTAGTGACTGAGTTTCTGCGTTCCTTCAACCTCCATTCCTCTGTTTGTCAAATCATGTGTCGAAAGATTCTATCCTTTGCCCGACAGTTTGACGGGAGC
TTCAAAATAGAAGCGAAGATCGATTACATGGAGGACTTGATCTGGAATATGGAGGTTGTCCCTGAGCTATTATACCCAATTTCTATTATTTCTGAAGAAGCTGGAGCAGG
GGCGCCGGAGTCGGTAATTGAGAGATTAAGGAAGCAGAAATTTGAAGAAGAAGAAGAAGAAGAGATGGAAGAGTGTTGTGTTTGTTGCGAAGATCTAAAAGGGAAGGGTA
TGGAAGTGAGTAGGATTCCGTGCGGTCATTGTTTACAAACCTTGTTGCCAATCTGGTTTGTTCGGACGCCGAAGGTTGGAGCAGCGCGGATGCCGGAGGTTGCCATTGCT
AGAGCGAACTCTGGAGAGGGGAGAAGTCAAGAGGCCAAAAGGGAGAAGGGAGCAGCTAATCTACCCGATGTCAATCTATGTTGGAGGCTGGAGCAAAGACAGAAAAGGGA
GAAGTCGAAAGGCAGAGGAGAAATCGAGAAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTCTCTATTGCTTCATCCCTCGAATATAGTTTTCGCAGCACTCCAAACAGCGATCAAATCCTGGAAGTTCGATTTGGGCATTGCAGCCGCCTGATTTCTCGATC
TTCCTCTCCCGGAATCATTCCAGACCAAATACTGCAACATATTCCCTCAACTCTAATGGGGGAGGCTCTGTTTCCTTTCTCTAATCTGAGGCATCCTCGACAACATCAAG
GAATGGAGATTTTAGTGACTGAGTTTCTGCGTTCCTTCAACCTCCATTCCTCTGTTTGTCAAATCATGTGTCGAAAGATTCTATCCTTTGCCCGACAGTTTGACGGGAGC
TTCAAAATAGAAGCGAAGATCGATTACATGGAGGACTTGATCTGGAATATGGAGGTTGTCCCTGAGCTATTATACCCAATTTCTATTATTTCTGAAGAAGCTGGAGCAGG
GGCGCCGGAGTCGGTAATTGAGAGATTAAGGAAGCAGAAATTTGAAGAAGAAGAAGAAGAAGAGATGGAAGAGTGTTGTGTTTGTTGCGAAGATCTAAAAGGGAAGGGTA
TGGAAGTGAGTAGGATTCCGTGCGGTCATTGTTTACAAACCTTGTTGCCAATCTGGTTTGTTCGGACGCCGAAGGTTGGAGCAGCGCGGATGCCGGAGGTTGCCATTGCT
AGAGCGAACTCTGGAGAGGGGAGAAGTCAAGAGGCCAAAAGGGAGAAGGGAGCAGCTAATCTACCCGATGTCAATCTATGTTGGAGGCTGGAGCAAAGACAGAAAAGGGA
GAAGTCGAAAGGCAGAGGAGAAATCGAGAAAAGTTGA
Protein sequenceShow/hide protein sequence
MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDGS
FKIEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEEEEEEEMEECCVCCEDLKGKGMEVSRIPCGHCLQTLLPIWFVRTPKVGAARMPEVAIA
RANSGEGRSQEAKREKGAANLPDVNLCWRLEQRQKREKSKGRGEIEKS