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Clc08G02400 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G02400
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:4668620..4669294
RNA-Seq ExpressionClc08G02400
SyntenyClc08G02400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035003.1 hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa]1.3e-2971Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATN-WEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
        MGGN RQK K+HSSFSIF+FFKS+R RKGD   H+ +  +E+  + KVWPSDEDK   WVAEPGID+KAKDYIDRIYRN VFE+ERQT+TI PNG KSNV
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATN-WEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
KAG6592306.1 hypothetical protein SDJN03_14652, partial [Cucurbita argyrosperma subsp. sororia]5.6e-3071.43Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSN
        MGGN R K K HSSFSIFNFFKSK+SRK D  +H++ W+E+  + KVWPSDEDK  RWVAEPGID+KAKDYIDRIYRN VFE+ERQTVT+  NG K N
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSN
KAG6592308.1 hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2970.83Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHK
        MGGN R K K HSSFSIFNFFKS+RSRK D  +H+  W+E+  +SK+WPSDEDK  RWVAEPGID+KAKDYIDRIYRN VFE+ERQTVT+  +G K
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHK
KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]2.3e-3174Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNW-EEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
        MGGN RQK K+HSSFSIF+FFKSKR RKGD Y+H   W +E+  ++KVWPSDEDK   W+AEPGID+KAKDYIDRIYRN VFE+ERQTVTI PNG KSNV
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNW-EEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
KGN45873.1 hypothetical protein Csa_005148 [Cucumis sativus]8.7e-3982.83Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
        MGG++RQK KTHSSFSIF+FFKSKR RKGD YEH TNWE+V S+SKVWPSDEDKG+RWVAEPGID+KAKDYIDRIY+N VFETERQTVTI PNG  SNV
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein1.1e-3174Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNW-EEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
        MGGN RQK K+HSSFSIF+FFKSKR RKGD Y+H   W +E+  ++KVWPSDEDK   W+AEPGID+KAKDYIDRIYRN VFE+ERQTVTI PNG KSNV
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNW-EEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
A0A0A0K8W0 Uncharacterized protein4.2e-3982.83Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
        MGG++RQK KTHSSFSIF+FFKSKR RKGD YEH TNWE+V S+SKVWPSDEDKG+RWVAEPGID+KAKDYIDRIY+N VFETERQTVTI PNG  SNV
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
A0A0A0KAK6 Uncharacterized protein1.8e-2971Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATN-WEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
        MGGN RQK K H+SFSIF+FFKS+R RKGD   H+ +  +E+  + KVWPSDEDK   WVAEPGID+KAKDYIDRIYRN VFE+ERQTVTI PNG KSNV
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATN-WEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
A0A0A0KBW1 Uncharacterized protein1.9e-3174Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNW-EEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
        MGGN RQK K+HSSFSIF+FFKS+R RKGD Y+H   W +E+  ++KVWPSDEDK   WVAEPGID+KAKDYIDRIYRN VFE+ERQTVTI PNG KSNV
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNW-EEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
A0A5A7SWT9 Uncharacterized protein6.1e-3071Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATN-WEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
        MGGN RQK K+HSSFSIF+FFKS+R RKGD   H+ +  +E+  + KVWPSDEDK   WVAEPGID+KAKDYIDRIYRN VFE+ERQT+TI PNG KSNV
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATN-WEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein6.7e-1346.15Show/hide
Query:  MGGNYRQKNKTHSS--FSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVT
        MGG    KN++HSS  FS+F+FFK++RS +    E   +W++   T K   SDEDK + WVAEPGID+KA  +I + +   V E+ERQT++
Subjt:  MGGNYRQKNKTHSS--FSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVT
AT5G26620.1 unknown protein1.2e-0946.03Show/hide
Query:  EHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGH
        E   +W++V  T K W SDEDK + WVAEPGID+KA  +I + + + V E+ERQT+    + H
Subjt:  EHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGCAACTACAGGCAAAAGAATAAGACTCATTCATCCTTCTCCATCTTTAACTTCTTTAAATCAAAAAGAAGTAGGAAAGGAGATCCTTATGAGCATGCTACCAA
TTGGGAGGAGGTGTCGAGCACAAGTAAGGTGTGGCCGAGCGATGAGGACAAAGGCTTCCGTTGGGTTGCTGAGCCTGGTATCGATCAAAAGGCCAAAGATTACATCGATA
GGATTTATAGGAATCATGTCTTTGAAACCGAGCGCCAAACGGTCACTATTCTTCCTAATGGACATAAGTCCAATGTATAA
mRNA sequenceShow/hide mRNA sequence
CACAGTTGAACTCATTTTCCATTTGATTGCTTCTTCTAAACCATGGGAGGCAACTACAGGCAAAAGAATAAGACTCATTCATCCTTCTCCATCTTTAACTTCTTTAAATC
AAAAAGAAGTAGGAAAGGAGATCCTTATGAGCATGCTACCAATTGGGAGGAGGTGTCGAGCACAAGTAAGGTGTGGCCGAGCGATGAGGACAAAGGCTTCCGTTGGGTTG
CTGAGCCTGGTATCGATCAAAAGGCCAAAGATTACATCGATAGGATTTATAGGAATCATGTCTTTGAAACCGAGCGCCAAACGGTCACTATTCTTCCTAATGGACATAAG
TCCAATGTATAAATAGTTTATTTGTATTTTTTTCAAATTTACTTTTCTGTCTTGGTTGTTCTTTTCTACAAAATGCGGAGTAAATGCATCAACCTAAGACTTCGAGATCG
ATAGCAAAGACTTTATGCTAGTTGACTTATGCTCCGTAGTTAACTTAAAGTATGGTGATTCATTCAAGACGTCTGTTACAACTCTGCTGTTTCATCAAATACTATTTTGT
TGGTATAAAATTTATAGCTCTAGCTGTAGAGGGATATCTTTTCATTTTCCATTGTATATTTGGTATATTTTTGTATTTGAAAAAATGTCAAAACATTATTATTTTATTAA
CGGTTGTTGGCCATC
Protein sequenceShow/hide protein sequence
MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNHVFETERQTVTILPNGHKSNV