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Clc08G02420 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G02420
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBnaC03g34390D protein
Genome locationClcChr08:4745809..4749228
RNA-Seq ExpressionClc08G02420
SyntenyClc08G02420
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592306.1 hypothetical protein SDJN03_14652, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2774.71Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT
        MGGN R K K HSSFSIFNFFKSK+SRK D  +H++ W+E+  + KVWPSDEDK  RWVAEPGID+KAKDYIDRIYRNRVFE+ERQT
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT

KAG6592308.1 hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2774.71Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT
        MGGN R K K HSSFSIFNFFKS+RSRK D  +H+  W+E+  +SK+WPSDEDK  RWVAEPGID+KAKDYIDRIYRNRVFE+ERQT
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT

KAG6592314.1 hypothetical protein SDJN03_14660, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2674.71Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT
        MGGN R K KTHSSFSIFNFFK KR RK D  +H+  W+E+  +SKVWPSDEDK  RWVAEPGID+KAKDYIDRIYRNRV E+ERQT
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT

KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]3.4e-2673.86Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNW-EEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT
        MGGN RQK K+HSSFSIF+FFKSKR RKGD Y+H   W +E+  ++KVWPSDEDK   W+AEPGID+KAKDYIDRIYRNRVFE+ERQT
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNW-EEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT

KGN45873.1 hypothetical protein Csa_005148 [Cucumis sativus]2.6e-3485.06Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT
        MGG++RQK KTHSSFSIF+FFKSKR RKGD YEH TNWE+V S+SKVWPSDEDKG+RWVAEPGID+KAKDYIDRIY+NRVFETERQT
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT

TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein1.6e-2673.86Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNW-EEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT
        MGGN RQK K+HSSFSIF+FFKSKR RKGD Y+H   W +E+  ++KVWPSDEDK   W+AEPGID+KAKDYIDRIYRNRVFE+ERQT
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNW-EEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT

A0A0A0K8W0 Uncharacterized protein1.2e-3485.06Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT
        MGG++RQK KTHSSFSIF+FFKSKR RKGD YEH TNWE+V S+SKVWPSDEDKG+RWVAEPGID+KAKDYIDRIY+NRVFETERQT
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT

A0A0A0KAK6 Uncharacterized protein2.0e-2470.45Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATN-WEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT
        MGGN RQK K H+SFSIF+FFKS+R RKGD   H+ +  +E+  + KVWPSDEDK   WVAEPGID+KAKDYIDRIYRNRVFE+ERQT
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATN-WEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT

A0A0A0KBW1 Uncharacterized protein2.8e-2673.86Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNW-EEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT
        MGGN RQK K+HSSFSIF+FFKS+R RKGD Y+H   W +E+  ++KVWPSDEDK   WVAEPGID+KAKDYIDRIYRNRVFE+ERQT
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNW-EEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT

A0A5A7SWT9 Uncharacterized protein6.8e-2571.59Show/hide
Query:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATN-WEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT
        MGGN RQK K+HSSFSIF+FFKS+R RKGD   H+ +  +E+  + KVWPSDEDK   WVAEPGID+KAKDYIDRIYRNRVFE+ERQT
Subjt:  MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATN-WEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein4.5e-1348.31Show/hide
Query:  MGGNYRQKNKTHSS--FSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT
        MGG    KN++HSS  FS+F+FFK++RS +    E   +W++   T K   SDEDK + WVAEPGID+KA  +I + +  RV E+ERQT
Subjt:  MGGNYRQKNKTHSS--FSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT

AT5G26620.1 unknown protein1.4e-0952.73Show/hide
Query:  EHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT
        E   +W++V  T K W SDEDK + WVAEPGID+KA  +I + + +RV E+ERQT
Subjt:  EHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGCAACTACAGGCAAAAGAATAAGACTCATTCATCCTTCTCCATCTTTAACTTCTTTAAATCAAAAAGAAGTAGGAAAGGAGATCCTTATGAGCATGCTACCAA
TTGGGAGGAGGTGTCGAGCACAAGTAAGGTGTGGCCGAGCGATGAGGACAAAGGCTTCCGTTGGGTTGCTGAGCCTGGTATCGATCAAAAGGCCAAAGATTACATCGATA
GGATTTATAGGAATCGTGTCTTTGAAACCGAGCGCCAAACGCGTCGTGGTGCCTTGTGGACCTGCGGGCTGCGCTGTTCGCAGAATCATGAGTTTTTGGAGAAATACACA
CAGCATCATGGCACTACTTTTGAGCGTCGTGACGCTTTGAAGATGAAACGTGGAAGATTTTGTGACAGTGCTGCGGTGCTATGTCAAACCGTCGCCATTGATCGAAATGT
CGATAATGGGCTAAGCTCGGACGGGAGGAAAGATGATGTAGGAAGGAAGCTAGGGAACGAAGAGCTTTATAAGAGTTTACCTGGGCAAAAGGAACATTTAAGGAACGCAT
TCACAGGAAGAAGAAGAGGAAAGAACAATGGCGCAACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGCAACTACAGGCAAAAGAATAAGACTCATTCATCCTTCTCCATCTTTAACTTCTTTAAATCAAAAAGAAGTAGGAAAGGAGATCCTTATGAGCATGCTACCAA
TTGGGAGGAGGTGTCGAGCACAAGTAAGGTGTGGCCGAGCGATGAGGACAAAGGCTTCCGTTGGGTTGCTGAGCCTGGTATCGATCAAAAGGCCAAAGATTACATCGATA
GGATTTATAGGAATCGTGTCTTTGAAACCGAGCGCCAAACGCGTCGTGGTGCCTTGTGGACCTGCGGGCTGCGCTGTTCGCAGAATCATGAGTTTTTGGAGAAATACACA
CAGCATCATGGCACTACTTTTGAGCGTCGTGACGCTTTGAAGATGAAACGTGGAAGATTTTGTGACAGTGCTGCGGTGCTATGTCAAACCGTCGCCATTGATCGAAATGT
CGATAATGGGCTAAGCTCGGACGGGAGGAAAGATGATGTAGGAAGGAAGCTAGGGAACGAAGAGCTTTATAAGAGTTTACCTGGGCAAAAGGAACATTTAAGGAACGCAT
TCACAGGAAGAAGAAGAGGAAAGAACAATGGCGCAACCTAA
Protein sequenceShow/hide protein sequence
MGGNYRQKNKTHSSFSIFNFFKSKRSRKGDPYEHATNWEEVSSTSKVWPSDEDKGFRWVAEPGIDQKAKDYIDRIYRNRVFETERQTRRGALWTCGLRCSQNHEFLEKYT
QHHGTTFERRDALKMKRGRFCDSAAVLCQTVAIDRNVDNGLSSDGRKDDVGRKLGNEELYKSLPGQKEHLRNAFTGRRRGKNNGAT