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Clc08G02430 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G02430
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:4766519..4767199
RNA-Seq ExpressionClc08G02430
SyntenyClc08G02430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035003.1 hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa]1.1e-4488.89Show/hide
Query:  MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV
        MGGNNRQKK+HSSFSIFSFFKSRRGRKGD+C+H GS LDEMPRS KVWPSDEDK HHWVAEPGIDRKAKDYIDRIYRNRVFESERQT+T+ PNGTK NV
Subjt:  MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV

KAG6592308.1 hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sororia]6.0e-4085.42Show/hide
Query:  MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTK
        MGGNNR KKAHSSFSIF+FFKSRR RK DHCDH G W DE+PRSSK+WPSDEDK H WVAEPGIDRKAKDYIDRIYRNRVFESERQTVT+P +GTK
Subjt:  MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTK

KAG6592316.1 hypothetical protein SDJN03_14662, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3985.42Show/hide
Query:  MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTK
        MGGNNR KKAHSSFSIF+FFK RRGRK DHCDH G W DEMPRS+KVWPSDEDK H WVAEPGIDRKAKDYIDRIYRNRV ESERQTVT+P +GTK
Subjt:  MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTK

KGN45869.1 hypothetical protein Csa_005516 [Cucumis sativus]6.2e-4589.9Show/hide
Query:  MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV
        MGGNNRQKKAH+SFSIFSFFKSRRGRKGDHC+H GS LDEMPRS KVWPSDEDK HHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVT+ PNG K NV
Subjt:  MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV

KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]1.2e-4387.63Show/hide
Query:  GNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV
        G NRQKK+HSSFSIFSFFKS+RGRKGDH DHGG+W DEMPRS+KVWPSDEDK HHW+AEPGIDRKAKDYIDRIYRNRVFESERQTVT+ PNGTK NV
Subjt:  GNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV

TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein5.7e-4487.63Show/hide
Query:  GNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV
        G NRQKK+HSSFSIFSFFKS+RGRKGDH DHGG+W DEMPRS+KVWPSDEDK HHW+AEPGIDRKAKDYIDRIYRNRVFESERQTVT+ PNGTK NV
Subjt:  GNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV

A0A0A0K8V3 Uncharacterized protein2.6e-3681.32Show/hide
Query:  GNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPN
        G ++ KK+HSSFS FSF KS+  RKGDH DHGGSWLDE  RS KVWPSDEDK HHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVT+P N
Subjt:  GNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPN

A0A0A0KAK6 Uncharacterized protein3.0e-4589.9Show/hide
Query:  MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV
        MGGNNRQKKAH+SFSIFSFFKSRRGRKGDHC+H GS LDEMPRS KVWPSDEDK HHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVT+ PNG K NV
Subjt:  MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV

A0A0A0KBW1 Uncharacterized protein3.0e-4590.72Show/hide
Query:  GNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV
        G NRQKK+HSSFSIFSFFKSRRGRKGDH DHGG+WLDEMPRS+KVWPSDEDK HHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVT+ PNGTK NV
Subjt:  GNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV

A0A5A7SWT9 Uncharacterized protein5.1e-4588.89Show/hide
Query:  MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV
        MGGNNRQKK+HSSFSIFSFFKSRRGRKGD+C+H GS LDEMPRS KVWPSDEDK HHWVAEPGIDRKAKDYIDRIYRNRVFESERQT+T+ PNGTK NV
Subjt:  MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein1.6e-1451.65Show/hide
Query:  MGGNNRQKKAHSS--FSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVT
        MGG NR   +HSS  FS+FSFFK+RR  +    +  GSW D+   + K   SDEDK  +WVAEPGIDRKA  +I + +  RV ESERQT++
Subjt:  MGGNNRQKKAHSS--FSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVT

AT5G26620.1 unknown protein1.2e-0956.14Show/hide
Query:  SWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPP
        SW D++  + K W SDEDK  +WVAEPGIDRKA  +I + + +RV ESERQ  T+PP
Subjt:  SWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGCAACAACAGGCAAAAGAAAGCTCACTCATCTTTTTCAATCTTTAGCTTTTTCAAATCTAGAAGGGGTCGAAAAGGAGACCATTGCGACCACGGTGGGTCTTG
GCTAGACGAGATGCCGAGATCGAGCAAGGTGTGGCCGAGCGATGAGGACAAACCTCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATTGATA
GGATCTATCGAAACCGTGTTTTTGAATCTGAGCGCCAAACTGTTACCGTACCTCCCAATGGAACAAAACCCAATGTGTAG
mRNA sequenceShow/hide mRNA sequence
CTTGAATCCAAAGATTCTTTGCTTTCCCAACACAGCACAATGTTCTTTCATAAGTGATGCCCTTTTAATTATTTCACTATAAAAACATCATCCTCATAATCCCTCTCTTT
AAACCAACACTCACAGTTCTAAGTTCATTTTTGCATCTAATTTCTTCATCTACACCATGGGAGGCAACAACAGGCAAAAGAAAGCTCACTCATCTTTTTCAATCTTTAGC
TTTTTCAAATCTAGAAGGGGTCGAAAAGGAGACCATTGCGACCACGGTGGGTCTTGGCTAGACGAGATGCCGAGATCGAGCAAGGTGTGGCCGAGCGATGAGGACAAACC
TCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATTGATAGGATCTATCGAAACCGTGTTTTTGAATCTGAGCGCCAAACTGTTACCGTACCTC
CCAATGGAACAAAACCCAATGTGTAGATAATTTGTGTGGATATATTTTTTTTTCCATATAGTATTTGTTCATTAAATAATGTAGTTTTATGATTGTAGGATTTATTTTGA
GTTGATTAAAGTGTGACTATGTATCTCCTAATGGAGTTCTCTCTCATTTATATATGCCCCTCTTCTCTATCACTTGCGTTGTAGTTTTAGTTGTTTACATTTTTTGAAGT
ATTTTCACAGATAGTTTTCCA
Protein sequenceShow/hide protein sequence
MGGNNRQKKAHSSFSIFSFFKSRRGRKGDHCDHGGSWLDEMPRSSKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTVPPNGTKPNV