CuGenDBv2

Gene ID	Clc08G02800
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Reverse transcriptase
Genome location	ClcChr08:5530654..5533377
RNA-Seq Expression	Clc08G02800
Synteny	Clc08G02800
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0016740 - transferase activity (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR021109 - Aspartic peptidase domain superfamily IPR036397 - Ribonuclease H superfamily IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]

3.2e-292

59.68

Show/hide

Query:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM
        M+VD  IN KP K T+VDSGATHNFI+E EA+RL L+ EKD G+MKAVNS ALPI+G+ KR  ++L GW+G VD VVV+MDDFDV+LGMEFLLEH+VIPM
Subjt:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM

Query:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------
        PLAKCL++T                        +++GLSR+EPTFMAIP+       E V  EI  +L +                              
Subjt:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------

Query:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR
                                                                  ALNK+TVRNKYPLPIITDLFD+L+GA+YF+KLDLRSGYYQVR
Subjt:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR

Query:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL
        IA+GDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLD+FVV                             NQLYVK+EK +FAQ+ INFL
Subjt:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL

Query:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----
        GHVIE G+I M+  K+ AI++W +P SV+ELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W W  ECQ+AF+ LK  +  GP+L + DVTKP    
Subjt:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----

Query:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG
                                                        +    L G  FVVKTDN+A CHFF+QPKLTSKQARWQEFLAEFDF FEHK G
Subjt:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG

Query:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH
         SNQAADALSRK EHAA+C+L H+Q S++ GS+R+ ++EFLQKD +AQ V++LAKAGKTRQFWVE DLL+TKGNRLYVPRAG LRKKLL+ECHDTLWAGH
Subjt:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH

Query:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE
        PGWQRTYALLKKGYFWP+MR+DV+QYTK CLICQQDKVEK K+AGLL+PLPVP+RPWESVSMDFITHLPKVG+ EAILVI+DRFSKYATFI   K CS E
Subjt:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE

Query:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK
         TAQLFFKHVVKLWG+P SIVSD+DGRFIG+FW ELFSFLGTSLNISSSYHPQTDGQTERFN +LEEYLRHFV+A  K
Subjt:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]

3.2e-292

59.68

Show/hide

Query:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM
        M+VD  IN KP K T+VDSGATHNFI+E EA+RL L+ EKD G+MKAVNS ALPI+G+ KR  ++L GW+G VD VVV+MDDFDV+LGMEFLLEH+VIPM
Subjt:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM

Query:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------
        PLAKCL++T                        +++GLSR+EPTFMAIP+       E V  EI  +L +                              
Subjt:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------

Query:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR
                                                                  ALNK+TVRNKYPLPIITDLFD+L+GA+YF+KLDLRSGYYQVR
Subjt:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR

Query:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL
        IA+GDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLD+FVV                             NQLYVK+EK +FAQ+ INFL
Subjt:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL

Query:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----
        GHVIE G+I M+  K+ AI++W +P SV+ELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W W  ECQ+AF+ LK  +  GP+L + DVTKP    
Subjt:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----

Query:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG
                                                        +    L G  FVVKTDN+A CHFF+QPKLTSKQARWQEFLAEFDF FEHK G
Subjt:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG

Query:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH
         SNQAADALSRK EHAA+C+L H+Q S++ GS+R+ ++EFLQKD +AQ V++LAKAGKTRQFWVE DLL+TKGNRLYVPRAG LRKKLL+ECHDTLWAGH
Subjt:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH

Query:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE
        PGWQRTYALLKKGYFWP+MR+DV+QYTK CLICQQDKVEK K+AGLL+PLPVP+RPWESVSMDFITHLPKVG+ EAILVI+DRFSKYATFI   K CS E
Subjt:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE

Query:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK
         TAQLFFKHVVKLWG+P SIVSD+DGRFIG+FW ELFSFLGTSLNISSSYHPQTDGQTERFN +LEEYLRHFV+A  K
Subjt:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]

3.2e-292

59.68

Show/hide

Query:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM
        M+VD  IN KP K T+VDSGATHNFI+E EA+RL L+ EKD G+MKAVNS ALPI+G+ KR  ++L GW+G VD VVV+MDDFDV+LGMEFLLEH+VIPM
Subjt:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM

Query:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------
        PLAKCL++T                        +++GLSR+EPTFMAIP+       E V  EI  +L +                              
Subjt:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------

Query:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR
                                                                  ALNK+TVRNKYPLPIITDLFD+L+GA+YF+KLDLRSGYYQVR
Subjt:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR

Query:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL
        IA+GDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLD+FVV                             NQLYVK+EK +FAQ+ INFL
Subjt:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL

Query:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----
        GHVIE G+I M+  K+ AI++W +P SV+ELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W W  ECQ+AF+ LK  +  GP+L + DVTKP    
Subjt:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----

Query:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG
                                                        +    L G  FVVKTDN+A CHFF+QPKLTSKQARWQEFLAEFDF FEHK G
Subjt:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG

Query:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH
         SNQAADALSRK EHAA+C+L H+Q S++ GS+R+ ++EFLQKD +AQ V++LAKAGKTRQFWVE DLL+TKGNRLYVPRAG LRKKLL+ECHDTLWAGH
Subjt:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH

Query:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE
        PGWQRTYALLKKGYFWP+MR+DV+QYTK CLICQQDKVEK K+AGLL+PLPVP+RPWESVSMDFITHLPKVG+ EAILVI+DRFSKYATFI   K CS E
Subjt:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE

Query:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK
         TAQLFFKHVVKLWG+P SIVSD+DGRFIG+FW ELFSFLGTSLNISSSYHPQTDGQTERFN +LEEYLRHFV+A  K
Subjt:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK

TYK01597.1 reverse transcriptase [Cucumis melo var. makuwa]

1.5e-294

59.91

Show/hide

Query:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM
        M+VD  IN KP K T+VDSGATHNFI+E EA+RL L+ EKD G+MKAVNS ALPI+G+ KR  ++L GW+G VD VVV+MDDFDV+LGMEFLLEH+VIPM
Subjt:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM

Query:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------
        PLAKCL++T                        +++GLSR+EPTFMAIP+       E V  EI  +L +                              
Subjt:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------

Query:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR
                                                                  ALNK+TVRNKYPLPIITDLFD+L+GA+YF+KLDLRSGYYQVR
Subjt:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR

Query:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL
        IA+GDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLD+FVV                             NQLYVK+EK +FAQ+ INFL
Subjt:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL

Query:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----
        GHVIE G+I M+  K+ AI++W +P SV+ELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W W  ECQ+AF+ LK  M  GP+L + DVTKP    
Subjt:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----

Query:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG
                                                        +    L G  FVVKTDN+A CHFF+QPKLTSKQARWQEFLAEFDF FEHK G
Subjt:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG

Query:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH
         +NQAADALSRK EHAA+C+L H++ S++ GS+R+ ++EFLQKD +AQ V++L KAGKTRQFWVE DLL+TKGNRLYVPRAGDLRKKLL+ECHDTLWAGH
Subjt:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH

Query:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE
        PGWQRTYALLKKGYFWP+MR+DV+QYTK CLICQQDKVEK K+AGLL+PLPVP+RPWESVSMDFITHLPKVG+ EAILVI+DRFSKYATFI T K CS E
Subjt:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE

Query:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK
        MTAQLFFKHVVKLWG+P SIVSD+DGRFIG+FW ELFSFLGTSLNISSSYHPQTDGQTERFNC+LEEYLRHFV+A  K
Subjt:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]

9.6e-297

62.97

Show/hide

Query:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM
        MFVDA+INS+ +K TL+DSGATHNFI++QEARRL L I KD GKMKAVNSEALPIVGVSK VP ++  WTG +DLVVVRMDDFDV+LGMEFLLEHKVIPM
Subjt:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM

Query:  PLAKCLIVTN-----------------------IEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILN-------------------------------
        PLAKCL++T+                       ++ GL+REEPTFMAIP+++E T  E V  EI+++L+                               
Subjt:  PLAKCLIVTN-----------------------IEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILN-------------------------------

Query:  ---------------------------------------------------------EALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR
                                                                  ALNKVTVRNKYPLPII+DLFDQL+GA+YFTKLDLRSGYYQVR
Subjt:  ---------------------------------------------------------EALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR

Query:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL
        IA+GDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVF+EYLDQFV+                             NQLYVKKEK AFAQ  I+FL
Subjt:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL

Query:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----
        GHV+  G+I MDSDK+KAIQEW+VP+SV+ELRSFLGLANYYRRFVEGFSRRAAPLTELLKKD  W WS++CQ AFE LK TMTRGP+L LVDVTKP    
Subjt:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----

Query:  -----------------------------------SLEAILA-------------GIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG
                                           S + +LA             G  FVVKTDN+A CHFF QPKLT+KQARWQE LAEFDF+FEHK G
Subjt:  -----------------------------------SLEAILA-------------GIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG

Query:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH
        +SNQAADALSRKGEHAA+C+L HI SSK++GSMR+IIKE L KDPSA+AVV LAKAGKTRQFWVEGDLL+TKGNRLYVPR G+LRKKL+ ECHDTLWAGH
Subjt:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH

Query:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE
        PGWQRTYAL+KKGYFWP+MR+D++QYTK CLICQQDKVEKAK++GLLEPLPVP+RPWESVS+DFITHLPKVGE++AILVIVDRFSKYATFI TPKLCS E
Subjt:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE

Query:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISS
        +TAQLFFKHVVKLWGIP+SI+SD+DGRFIGTFW ELF+FLGT+LNISS
Subjt:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISS

TrEMBL top hits

e value

%identity

Alignment

A0A5D3B7E7 Reverse transcriptase

1.5e-292

59.68

Show/hide

Query:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM
        M+VD  IN KP K T+VDSGATHNFI+E EA+RL L+ EKD G+MKAVNS ALPI+G+ KR  ++L GW+G VD VVV+MDDFDV+LGMEFLLEH+VIPM
Subjt:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM

Query:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------
        PLAKCL++T                        +++GLSR+EPTFMAIP+       E V  EI  +L +                              
Subjt:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------

Query:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR
                                                                  ALNK+TVRNKYPLPIITDLFD+L+GA+YF+KLDLRSGYYQVR
Subjt:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR

Query:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL
        IA+GDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLD+FVV                             NQLYVK+EK +FAQ+ INFL
Subjt:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL

Query:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----
        GHVIE G+I M+  K+ AI++W +P SV+ELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W W  ECQ+AF+ LK  +  GP+L + DVTKP    
Subjt:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----

Query:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG
                                                        +    L G  FVVKTDN+A CHFF+QPKLTSKQARWQEFLAEFDF FEHK G
Subjt:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG

Query:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH
         SNQAADALSRK EHAA+C+L H+Q S++ GS+R+ ++EFLQKD +AQ V++LAKAGKTRQFWVE DLL+TKGNRLYVPRAG LRKKLL+ECHDTLWAGH
Subjt:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH

Query:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE
        PGWQRTYALLKKGYFWP+MR+DV+QYTK CLICQQDKVEK K+AGLL+PLPVP+RPWESVSMDFITHLPKVG+ EAILVI+DRFSKYATFI   K CS E
Subjt:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE

Query:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK
         TAQLFFKHVVKLWG+P SIVSD+DGRFIG+FW ELFSFLGTSLNISSSYHPQTDGQTERFN +LEEYLRHFV+A  K
Subjt:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK

A0A5D3BQE4 Reverse transcriptase

7.4e-295

59.91

Show/hide

Query:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM
        M+VD  IN KP K T+VDSGATHNFI+E EA+RL L+ EKD G+MKAVNS ALPI+G+ KR  ++L GW+G VD VVV+MDDFDV+LGMEFLLEH+VIPM
Subjt:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM

Query:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------
        PLAKCL++T                        +++GLSR+EPTFMAIP+       E V  EI  +L +                              
Subjt:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------

Query:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR
                                                                  ALNK+TVRNKYPLPIITDLFD+L+GA+YF+KLDLRSGYYQVR
Subjt:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR

Query:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL
        IA+GDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLD+FVV                             NQLYVK+EK +FAQ+ INFL
Subjt:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL

Query:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----
        GHVIE G+I M+  K+ AI++W +P SV+ELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W W  ECQ+AF+ LK  M  GP+L + DVTKP    
Subjt:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----

Query:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG
                                                        +    L G  FVVKTDN+A CHFF+QPKLTSKQARWQEFLAEFDF FEHK G
Subjt:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG

Query:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH
         +NQAADALSRK EHAA+C+L H++ S++ GS+R+ ++EFLQKD +AQ V++L KAGKTRQFWVE DLL+TKGNRLYVPRAGDLRKKLL+ECHDTLWAGH
Subjt:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH

Query:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE
        PGWQRTYALLKKGYFWP+MR+DV+QYTK CLICQQDKVEK K+AGLL+PLPVP+RPWESVSMDFITHLPKVG+ EAILVI+DRFSKYATFI T K CS E
Subjt:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE

Query:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK
        MTAQLFFKHVVKLWG+P SIVSD+DGRFIG+FW ELFSFLGTSLNISSSYHPQTDGQTERFNC+LEEYLRHFV+A  K
Subjt:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK

A0A5D3BR73 Reverse transcriptase

1.5e-292

59.68

Show/hide

Query:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM
        M+VD  IN KP K T+VDSGATHNFI+E EA+RL L+ EKD G+MKAVNS ALPI+G+ KR  ++L GW+G VD VVV+MDDFDV+LGMEFLLEH+VIPM
Subjt:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM

Query:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------
        PLAKCL++T                        +++GLSR+EPTFMAIP+       E V  EI  +L +                              
Subjt:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------

Query:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR
                                                                  ALNK+TVRNKYPLPIITDLFD+L+GA+YF+KLDLRSGYYQVR
Subjt:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR

Query:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL
        IA+GDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLD+FVV                             NQLYVK+EK +FAQ+ INFL
Subjt:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL

Query:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----
        GHVIE G+I M+  K+ AI++W +P SV+ELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W W  ECQ+AF+ LK  +  GP+L + DVTKP    
Subjt:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----

Query:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG
                                                        +    L G  FVVKTDN+A CHFF+QPKLTSKQARWQEFLAEFDF FEHK G
Subjt:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG

Query:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH
         SNQAADALSRK EHAA+C+L H+Q S++ GS+R+ ++EFLQKD +AQ V++LAKAGKTRQFWVE DLL+TKGNRLYVPRAG LRKKLL+ECHDTLWAGH
Subjt:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH

Query:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE
        PGWQRTYALLKKGYFWP+MR+DV+QYTK CLICQQDKVEK K+AGLL+PLPVP+RPWESVSMDFITHLPKVG+ EAILVI+DRFSKYATFI   K CS E
Subjt:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE

Query:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK
         TAQLFFKHVVKLWG+P SIVSD+DGRFIG+FW ELFSFLGTSLNISSSYHPQTDGQTERFN +LEEYLRHFV+A  K
Subjt:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK

A0A5D3BRZ6 Reverse transcriptase

1.5e-292

59.68

Show/hide

Query:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM
        M+VD  IN KP K T+VDSGATHNFI+E EA+RL L+ EKD G+MKAVNS ALPI+G+ KR  ++L GW+G VD VVV+MDDFDV+LGMEFLLEH+VIPM
Subjt:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM

Query:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------
        PLAKCL++T                        +++GLSR+EPTFMAIP+       E V  EI  +L +                              
Subjt:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------

Query:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR
                                                                  ALNK+TVRNKYPLPIITDLFD+L+GA+YF+KLDLRSGYYQVR
Subjt:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR

Query:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL
        IA+GDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLD+FVV                             NQLYVK+EK +FAQ+ INFL
Subjt:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL

Query:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----
        GHVIE G+I M+  K+ AI++W +P SV+ELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W W  ECQ+AF+ LK  +  GP+L + DVTKP    
Subjt:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----

Query:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG
                                                        +    L G  FVVKTDN+A CHFF+QPKLTSKQARWQEFLAEFDF FEHK G
Subjt:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG

Query:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH
         SNQAADALSRK EHAA+C+L H+Q S++ GS+R+ ++EFLQKD +AQ V++LAKAGKTRQFWVE DLL+TKGNRLYVPRAG LRKKLL+ECHDTLWAGH
Subjt:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH

Query:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE
        PGWQRTYALLKKGYFWP+MR+DV+QYTK CLICQQDKVEK K+AGLL+PLPVP+RPWESVSMDFITHLPKVG+ EAILVI+DRFSKYATFI   K CS E
Subjt:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE

Query:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK
         TAQLFFKHVVKLWG+P SIVSD+DGRFIG+FW ELFSFLGTSLNISSSYHPQTDGQTERFN +LEEYLRHFV+A  K
Subjt:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK

A0A5D3C4R1 Reverse transcriptase

1.5e-292

59.68

Show/hide

Query:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM
        M+VD  IN KP K T+VDSGATHNFI+E EA+RL L+ EKD G+MKAVNS ALPI+G+ KR  ++L GW+G VD VVV+MDDFDV+LGMEFLLEH+VIPM
Subjt:  MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPM

Query:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------
        PLAKCL++T                        +++GLSR+EPTFMAIP+       E V  EI  +L +                              
Subjt:  PLAKCLIVT-----------------------NIEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNE------------------------------

Query:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR
                                                                  ALNK+TVRNKYPLPIITDLFD+L+GA+YF+KLDLRSGYYQVR
Subjt:  ----------------------------------------------------------ALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVR

Query:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL
        IA+GDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLD+FVV                             NQLYVK+EK +FAQ+ INFL
Subjt:  IAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDQFVV-----------------------------NQLYVKKEKYAFAQKSINFL

Query:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----
        GHVIE G+I M+  K+ AI++W +P SV+ELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W W  ECQ+AF+ LK  +  GP+L + DVTKP    
Subjt:  GHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMTRGPILDLVDVTKP----

Query:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG
                                                        +    L G  FVVKTDN+A CHFF+QPKLTSKQARWQEFLAEFDF FEHK G
Subjt:  ------------------------------------------------SLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTG

Query:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH
         SNQAADALSRK EHAA+C+L H+Q S++ GS+R+ ++EFLQKD +AQ V++LAKAGKTRQFWVE DLL+TKGNRLYVPRAG LRKKLL+ECHDTLWAGH
Subjt:  RSNQAADALSRKGEHAAMCVLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGH

Query:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE
        PGWQRTYALLKKGYFWP+MR+DV+QYTK CLICQQDKVEK K+AGLL+PLPVP+RPWESVSMDFITHLPKVG+ EAILVI+DRFSKYATFI   K CS E
Subjt:  PGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVE

Query:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK
         TAQLFFKHVVKLWG+P SIVSD+DGRFIG+FW ELFSFLGTSLNISSSYHPQTDGQTERFN +LEEYLRHFV+A  K
Subjt:  MTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLEEYLRHFVDAPAK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.0e-71

26.85

Show/hide

Query:  DFDVMLGME-FLLEHKVIPMPLAKCLIVTN-----IEEGLSREEPTFMAIPV--VDEITGTEFVHPEIQEILN-EALNKVTVRNKYPLPIITDLFDQLNG
        +F+V L  E + L  +  P+P  K   + +     ++ G+ RE     A PV  V +  GT      ++ +++ + LNK    N YPLP+I  L  ++ G
Subjt:  DFDVMLGME-FLLEHKVIPMPLAKCLIVTN-----IEEGLSREEPTFMAIPV--VDEITGTEFVHPEIQEILN-EALNKVTVRNKYPLPIITDLFDQLNG

Query:  ARYFTKLDLRSGYYQVRIAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHE--------YLDQFVVN---------------------QL
        +  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N +  E        Y+D  +++                      L
Subjt:  ARYFTKLDLRSGYYQVRIAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHE--------YLDQFVVN---------------------QL

Query:  YVKKEKYAFAQKSINFLGHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMT
         + + K  F Q  + F+G+ I         + +  + +W+ P +  ELR FLG  NY R+F+   S+   PL  LLKKD  W+W+     A E +K  + 
Subjt:  YVKKEKYAFAQKSINFLGHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMT

Query:  RGPILDLVDVTKPSL--------------------------------------------EAILAGIM---------------FVVKTDNTAICHFF---S
          P+L   D +K  L                                            + +LA I                F + TD+  +       S
Subjt:  RGPILDLVDVTKPSL--------------------------------------------EAILAGIM---------------FVVKTDNTAICHFF---S

Query:  QPKLTSKQARWQEFLAEFDFRFEHKTGRSNQAADALSRKGEHAAMC-------VLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEG
        +P+   + ARWQ FL +F+F   ++ G +N  ADALSR  +             +  +    +    +  +      D     +++           ++ 
Subjt:  QPKLTSKQARWQEFLAEFDFRFEHKTGRSNQAADALSRKGEHAAMC-------VLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEG

Query:  DLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGHPGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFIT
         LL+   +++ +P    L + ++ + H+     HPG +    ++ + + W  +R  + +Y + C  CQ +K    K  G L+P+P   RPWES+SMDFIT
Subjt:  DLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGHPGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFIT

Query:  HLPKVGEHEAILVIVDRFSKYATFIATPKLCSVEMTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLE
         LP+   + A+ V+VDRFSK A  +   K  + E TA++F + V+  +G P  I++D D  F    W +        +  S  Y PQTDGQTER N  +E
Subjt:  HLPKVGEHEAILVIVDRFSKYATFIATPKLCSVEMTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLE

Query:  EYLR
        + LR
Subjt:  EYLR

P0CT35 Transposon Tf2-2 polyprotein

2.0e-71

26.85

Show/hide

Query:  DFDVMLGME-FLLEHKVIPMPLAKCLIVTN-----IEEGLSREEPTFMAIPV--VDEITGTEFVHPEIQEILN-EALNKVTVRNKYPLPIITDLFDQLNG
        +F+V L  E + L  +  P+P  K   + +     ++ G+ RE     A PV  V +  GT      ++ +++ + LNK    N YPLP+I  L  ++ G
Subjt:  DFDVMLGME-FLLEHKVIPMPLAKCLIVTN-----IEEGLSREEPTFMAIPV--VDEITGTEFVHPEIQEILN-EALNKVTVRNKYPLPIITDLFDQLNG

Query:  ARYFTKLDLRSGYYQVRIAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHE--------YLDQFVVN---------------------QL
        +  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N +  E        Y+D  +++                      L
Subjt:  ARYFTKLDLRSGYYQVRIAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHE--------YLDQFVVN---------------------QL

Query:  YVKKEKYAFAQKSINFLGHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMT
         + + K  F Q  + F+G+ I         + +  + +W+ P +  ELR FLG  NY R+F+   S+   PL  LLKKD  W+W+     A E +K  + 
Subjt:  YVKKEKYAFAQKSINFLGHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMT

Query:  RGPILDLVDVTKPSL--------------------------------------------EAILAGIM---------------FVVKTDNTAICHFF---S
          P+L   D +K  L                                            + +LA I                F + TD+  +       S
Subjt:  RGPILDLVDVTKPSL--------------------------------------------EAILAGIM---------------FVVKTDNTAICHFF---S

Query:  QPKLTSKQARWQEFLAEFDFRFEHKTGRSNQAADALSRKGEHAAMC-------VLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEG
        +P+   + ARWQ FL +F+F   ++ G +N  ADALSR  +             +  +    +    +  +      D     +++           ++ 
Subjt:  QPKLTSKQARWQEFLAEFDFRFEHKTGRSNQAADALSRKGEHAAMC-------VLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEG

Query:  DLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGHPGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFIT
         LL+   +++ +P    L + ++ + H+     HPG +    ++ + + W  +R  + +Y + C  CQ +K    K  G L+P+P   RPWES+SMDFIT
Subjt:  DLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGHPGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFIT

Query:  HLPKVGEHEAILVIVDRFSKYATFIATPKLCSVEMTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLE
         LP+   + A+ V+VDRFSK A  +   K  + E TA++F + V+  +G P  I++D D  F    W +        +  S  Y PQTDGQTER N  +E
Subjt:  HLPKVGEHEAILVIVDRFSKYATFIATPKLCSVEMTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLE

Query:  EYLR
        + LR
Subjt:  EYLR

P0CT36 Transposon Tf2-3 polyprotein

2.0e-71

26.85

Show/hide

Query:  DFDVMLGME-FLLEHKVIPMPLAKCLIVTN-----IEEGLSREEPTFMAIPV--VDEITGTEFVHPEIQEILN-EALNKVTVRNKYPLPIITDLFDQLNG
        +F+V L  E + L  +  P+P  K   + +     ++ G+ RE     A PV  V +  GT      ++ +++ + LNK    N YPLP+I  L  ++ G
Subjt:  DFDVMLGME-FLLEHKVIPMPLAKCLIVTN-----IEEGLSREEPTFMAIPV--VDEITGTEFVHPEIQEILN-EALNKVTVRNKYPLPIITDLFDQLNG

Query:  ARYFTKLDLRSGYYQVRIAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHE--------YLDQFVVN---------------------QL
        +  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N +  E        Y+D  +++                      L
Subjt:  ARYFTKLDLRSGYYQVRIAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHE--------YLDQFVVN---------------------QL

Query:  YVKKEKYAFAQKSINFLGHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMT
         + + K  F Q  + F+G+ I         + +  + +W+ P +  ELR FLG  NY R+F+   S+   PL  LLKKD  W+W+     A E +K  + 
Subjt:  YVKKEKYAFAQKSINFLGHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMT

Query:  RGPILDLVDVTKPSL--------------------------------------------EAILAGIM---------------FVVKTDNTAICHFF---S
          P+L   D +K  L                                            + +LA I                F + TD+  +       S
Subjt:  RGPILDLVDVTKPSL--------------------------------------------EAILAGIM---------------FVVKTDNTAICHFF---S

Query:  QPKLTSKQARWQEFLAEFDFRFEHKTGRSNQAADALSRKGEHAAMC-------VLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEG
        +P+   + ARWQ FL +F+F   ++ G +N  ADALSR  +             +  +    +    +  +      D     +++           ++ 
Subjt:  QPKLTSKQARWQEFLAEFDFRFEHKTGRSNQAADALSRKGEHAAMC-------VLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEG

Query:  DLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGHPGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFIT
         LL+   +++ +P    L + ++ + H+     HPG +    ++ + + W  +R  + +Y + C  CQ +K    K  G L+P+P   RPWES+SMDFIT
Subjt:  DLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGHPGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFIT

Query:  HLPKVGEHEAILVIVDRFSKYATFIATPKLCSVEMTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLE
         LP+   + A+ V+VDRFSK A  +   K  + E TA++F + V+  +G P  I++D D  F    W +        +  S  Y PQTDGQTER N  +E
Subjt:  HLPKVGEHEAILVIVDRFSKYATFIATPKLCSVEMTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLE

Query:  EYLR
        + LR
Subjt:  EYLR

P0CT37 Transposon Tf2-4 polyprotein

2.0e-71

26.85

Show/hide

Query:  DFDVMLGME-FLLEHKVIPMPLAKCLIVTN-----IEEGLSREEPTFMAIPV--VDEITGTEFVHPEIQEILN-EALNKVTVRNKYPLPIITDLFDQLNG
        +F+V L  E + L  +  P+P  K   + +     ++ G+ RE     A PV  V +  GT      ++ +++ + LNK    N YPLP+I  L  ++ G
Subjt:  DFDVMLGME-FLLEHKVIPMPLAKCLIVTN-----IEEGLSREEPTFMAIPV--VDEITGTEFVHPEIQEILN-EALNKVTVRNKYPLPIITDLFDQLNG

Query:  ARYFTKLDLRSGYYQVRIAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHE--------YLDQFVVN---------------------QL
        +  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N +  E        Y+D  +++                      L
Subjt:  ARYFTKLDLRSGYYQVRIAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHE--------YLDQFVVN---------------------QL

Query:  YVKKEKYAFAQKSINFLGHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMT
         + + K  F Q  + F+G+ I         + +  + +W+ P +  ELR FLG  NY R+F+   S+   PL  LLKKD  W+W+     A E +K  + 
Subjt:  YVKKEKYAFAQKSINFLGHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMT

Query:  RGPILDLVDVTKPSL--------------------------------------------EAILAGIM---------------FVVKTDNTAICHFF---S
          P+L   D +K  L                                            + +LA I                F + TD+  +       S
Subjt:  RGPILDLVDVTKPSL--------------------------------------------EAILAGIM---------------FVVKTDNTAICHFF---S

Query:  QPKLTSKQARWQEFLAEFDFRFEHKTGRSNQAADALSRKGEHAAMC-------VLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEG
        +P+   + ARWQ FL +F+F   ++ G +N  ADALSR  +             +  +    +    +  +      D     +++           ++ 
Subjt:  QPKLTSKQARWQEFLAEFDFRFEHKTGRSNQAADALSRKGEHAAMC-------VLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEG

Query:  DLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGHPGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFIT
         LL+   +++ +P    L + ++ + H+     HPG +    ++ + + W  +R  + +Y + C  CQ +K    K  G L+P+P   RPWES+SMDFIT
Subjt:  DLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGHPGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFIT

Query:  HLPKVGEHEAILVIVDRFSKYATFIATPKLCSVEMTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLE
         LP+   + A+ V+VDRFSK A  +   K  + E TA++F + V+  +G P  I++D D  F    W +        +  S  Y PQTDGQTER N  +E
Subjt:  HLPKVGEHEAILVIVDRFSKYATFIATPKLCSVEMTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLE

Query:  EYLR
        + LR
Subjt:  EYLR

P0CT41 Transposon Tf2-12 polyprotein

2.0e-71

26.85

Show/hide

Query:  DFDVMLGME-FLLEHKVIPMPLAKCLIVTN-----IEEGLSREEPTFMAIPV--VDEITGTEFVHPEIQEILN-EALNKVTVRNKYPLPIITDLFDQLNG
        +F+V L  E + L  +  P+P  K   + +     ++ G+ RE     A PV  V +  GT      ++ +++ + LNK    N YPLP+I  L  ++ G
Subjt:  DFDVMLGME-FLLEHKVIPMPLAKCLIVTN-----IEEGLSREEPTFMAIPV--VDEITGTEFVHPEIQEILN-EALNKVTVRNKYPLPIITDLFDQLNG

Query:  ARYFTKLDLRSGYYQVRIAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHE--------YLDQFVVN---------------------QL
        +  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N +  E        Y+D  +++                      L
Subjt:  ARYFTKLDLRSGYYQVRIAQGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHE--------YLDQFVVN---------------------QL

Query:  YVKKEKYAFAQKSINFLGHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMT
         + + K  F Q  + F+G+ I         + +  + +W+ P +  ELR FLG  NY R+F+   S+   PL  LLKKD  W+W+     A E +K  + 
Subjt:  YVKKEKYAFAQKSINFLGHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEELKATMT

Query:  RGPILDLVDVTKPSL--------------------------------------------EAILAGIM---------------FVVKTDNTAICHFF---S
          P+L   D +K  L                                            + +LA I                F + TD+  +       S
Subjt:  RGPILDLVDVTKPSL--------------------------------------------EAILAGIM---------------FVVKTDNTAICHFF---S

Query:  QPKLTSKQARWQEFLAEFDFRFEHKTGRSNQAADALSRKGEHAAMC-------VLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEG
        +P+   + ARWQ FL +F+F   ++ G +N  ADALSR  +             +  +    +    +  +      D     +++           ++ 
Subjt:  QPKLTSKQARWQEFLAEFDFRFEHKTGRSNQAADALSRKGEHAAMC-------VLGHIQSSKVNGSMREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEG

Query:  DLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGHPGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFIT
         LL+   +++ +P    L + ++ + H+     HPG +    ++ + + W  +R  + +Y + C  CQ +K    K  G L+P+P   RPWES+SMDFIT
Subjt:  DLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGHPGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAKIAGLLEPLPVPSRPWESVSMDFIT

Query:  HLPKVGEHEAILVIVDRFSKYATFIATPKLCSVEMTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLE
         LP+   + A+ V+VDRFSK A  +   K  + E TA++F + V+  +G P  I++D D  F    W +        +  S  Y PQTDGQTER N  +E
Subjt:  HLPKVGEHEAILVIVDRFSKYATFIATPKLCSVEMTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHPQTDGQTERFNCLLE

Query:  EYLR
        + LR
Subjt:  EYLR

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.2e-18

37.41

Show/hide

Query:  NQLYVKKEKYAFAQKSINFLG--HVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEEL
        +Q Y  ++K AF Q  I +LG  H+I    +  D  KL+A+  W  P +  ELR FLGL  YYRRFV+ + +   PLTELLKK++  +W++    AF+ L
Subjt:  NQLYVKKEKYAFAQKSINFLG--HVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDECQSAFEEL

Query:  KATMTRGPILDLVDVTKPSLEAILAGIMFVVKTDNTAICHFFSQPKL
        K  +T  P+L L D+  P +  +         T   A C   SQP++
Subjt:  KATMTRGPILDLVDVTKPSLEAILAGIMFVVKTDNTAICHFFSQPKL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTTGTTGACGCGAGCATCAACTCCAAACCTGCTAAAGGCACCCTGGTAGACTCCGGTGCAACCCACAACTTCATTTCTGAACAGGAAGCCCGCCGCTTAGAACTCAA
AATTGAGAAAGACACGGGTAAGATGAAAGCCGTTAATTCGGAAGCCCTGCCAATTGTCGGGGTGTCCAAGAGGGTACCTTTACAGCTAGCGGGGTGGACTGGGAATGTCG
ATTTGGTCGTGGTACGCATGGACGACTTTGACGTCATGCTCGGAATGGAGTTCCTCTTGGAACACAAAGTCATCCCCATGCCCTTGGCCAAGTGCCTAATTGTCACCAAC
ATTGAAGAAGGTCTCAGTCGAGAGGAACCCACCTTCATGGCTATCCCGGTGGTCGATGAGATCACCGGAACCGAGTTCGTCCATCCAGAAATCCAAGAGATCCTGAACGA
GGCTCTAAATAAAGTAACAGTTCGAAACAAGTACCCCTTACCAATCATCACTGATCTGTTTGACCAGTTGAATGGAGCCCGATACTTTACGAAACTTGACCTCAGGTCAG
GGTACTACCAAGTTCGCATCGCACAGGGAGACGAACCGAAGACCACCTGTGTGACTAGATATGGGGCCTTCGAATTCCTCGTGATGCCCTTTGGACTCACCAACGCGCCA
GCCACGTTTTGTACACTGATGAACCAAGTATTCCACGAATATCTCGATCAGTTTGTAGTGAATCAACTATATGTGAAGAAAGAGAAGTATGCTTTTGCCCAAAAGAGTAT
TAACTTCTTGGGCCATGTGATCGAACATGGGAAGATCAGGATGGACAGTGACAAGTTGAAAGCCATCCAGGAGTGGAGAGTTCCTTCCTCTGTGGCCGAGTTGCGCTCTT
TCTTGGGTCTAGCAAATTACTATCGTCGTTTCGTCGAAGGATTTTCAAGAAGAGCTGCCCCCTTGACTGAGTTGTTGAAGAAAGACACCACCTGGCAGTGGTCGGACGAA
TGTCAGTCGGCCTTCGAAGAGCTTAAAGCGACTATGACGAGGGGCCCTATCCTCGATCTGGTTGACGTCACTAAACCCAGTCTGGAGGCAATACTTGCTGGGATCATGTT
TGTAGTTAAGACCGACAATACTGCGATCTGCCATTTTTTTAGCCAGCCAAAATTAACATCAAAGCAAGCGCGGTGGCAAGAGTTTCTGGCCGAATTTGACTTCCGTTTCG
AACACAAGACGGGGAGAAGCAACCAAGCTGCCGATGCCCTTAGCCGAAAAGGCGAGCATGCAGCTATGTGCGTGTTGGGCCATATTCAATCAAGCAAGGTCAATGGATCG
ATGCGGGAGATCATCAAAGAATTTCTGCAGAAAGACCCCTCCGCTCAGGCCGTAGTATCCTTAGCCAAAGCCGGCAAGACCAGACAATTCTGGGTTGAGGGAGACTTGCT
GTTGACAAAAGGGAACCGGTTGTATGTCCCTAGAGCAGGAGACTTGAGGAAGAAGCTGTTACACGAATGTCATGACACCTTGTGGGCAGGCCATCCAGGATGGCAAAGAA
CCTATGCTCTACTGAAGAAGGGCTACTTCTGGCCCAGTATGCGAAACGATGTCATACAATACACCAAGATCTGCCTCATTTGCCAACAAGACAAGGTCGAGAAAGCGAAA
ATTGCTGGGCTCCTCGAACCCCTGCCAGTGCCATCCAGACCATGGGAGAGTGTGTCCATGGATTTCATCACCCATCTGCCTAAGGTGGGCGAGCACGAAGCCATCTTAGT
TATCGTTGATCGGTTTTCGAAGTATGCCACCTTCATAGCTACCCCAAAACTATGCTCTGTCGAAATGACAGCTCAATTGTTCTTCAAACACGTGGTGAAGCTATGGGGAA
TTCCAGCCAGTATTGTCAGTGACAAAGATGGCAGATTCATAGGCACCTTCTGGCCCGAACTATTTTCCTTCTTAGGGACAAGCCTGAACATATCCTCGAGTTACCACCCC
CAAACAGATGGCCAGACAGAAAGGTTTAACTGTCTGCTCGAAGAATATTTACGTCACTTTGTCGACGCCCCGGCAAAAGAATCGGGTGCAGTTGTTAGATGTGGCCCAGT
TCTGCTTCAATTGTCAAACAAGCTCCTCAACAGGGAAGAGTCCCTTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MFVDASINSKPAKGTLVDSGATHNFISEQEARRLELKIEKDTGKMKAVNSEALPIVGVSKRVPLQLAGWTGNVDLVVVRMDDFDVMLGMEFLLEHKVIPMPLAKCLIVTN
IEEGLSREEPTFMAIPVVDEITGTEFVHPEIQEILNEALNKVTVRNKYPLPIITDLFDQLNGARYFTKLDLRSGYYQVRIAQGDEPKTTCVTRYGAFEFLVMPFGLTNAP
ATFCTLMNQVFHEYLDQFVVNQLYVKKEKYAFAQKSINFLGHVIEHGKIRMDSDKLKAIQEWRVPSSVAELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDTTWQWSDE
CQSAFEELKATMTRGPILDLVDVTKPSLEAILAGIMFVVKTDNTAICHFFSQPKLTSKQARWQEFLAEFDFRFEHKTGRSNQAADALSRKGEHAAMCVLGHIQSSKVNGS
MREIIKEFLQKDPSAQAVVSLAKAGKTRQFWVEGDLLLTKGNRLYVPRAGDLRKKLLHECHDTLWAGHPGWQRTYALLKKGYFWPSMRNDVIQYTKICLICQQDKVEKAK
IAGLLEPLPVPSRPWESVSMDFITHLPKVGEHEAILVIVDRFSKYATFIATPKLCSVEMTAQLFFKHVVKLWGIPASIVSDKDGRFIGTFWPELFSFLGTSLNISSSYHP
QTDGQTERFNCLLEEYLRHFVDAPAKESGAVVRCGPVLLQLSNKLLNREESL

Clc08G02800 (gene) of Watermelon (cordophanus) v2 genome