; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G02840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G02840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description3'-5' exoribonuclease 1-like
Genome locationClcChr08:5552110..5555626
RNA-Seq ExpressionClc08G02840
SyntenyClc08G02840
Gene Ontology termsGO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000175 - 3'-5'-exoribonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064806.1 3'-5' exoribonuclease 1-like [Cucumis melo var. makuwa]3.7e-23792.93Show/hide
Query:  LSASMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASD
        L  SMQRNCEASIKCL+NNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNS SWPAFHFESQKVQQC+M+ASD
Subjt:  LSASMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASD

Query:  CQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQI
        CQFYSLPVENRFQY PFKMFE NY CD+RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQHLSDFCRDLTGIQQI
Subjt:  CQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQI

Query:  QVDRGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDD
        QVDRGVTLNEALL HDKWLEK+GIKNTNF VVTWSNWDCRVML+SECRFKKI+KPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGL W+GRAHCGLDD
Subjt:  QVDRGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDD

Query:  AKNTARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGA
        AKNTARLLAL+MH+GFRFSITNSLMWQTTDCPLQWKQSPE V+ P QPPMKPKP+HIP+VQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGA
Subjt:  AKNTARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGA

Query:  RCHYFEWASP
        RCHYFEWASP
Subjt:  RCHYFEWASP

XP_004146778.1 3'-5' exoribonuclease 1 [Cucumis sativus]2.4e-23693.12Show/hide
Query:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF
        SMQRNCEASIKCL+NNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNS SWPAFHFESQKVQQC+M+ASDCQF
Subjt:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF

Query:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
        YSLPVENRFQY PFKMFE NY CD+RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
Subjt:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD

Query:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN
        RGVTLNEALL HDKWLEK+GIKNTNF VVTWSNWDCRVML+SECRFKKI+KPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGL W+GRAHCGLDDAKN
Subjt:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN

Query:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH
        TARLLAL+MH+GFRFSITNSLMWQTTDCPLQWKQSPE V+ P QPPMKPKP+HIP+VQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH
Subjt:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH

Query:  YFEWASP
        YFEWA+P
Subjt:  YFEWASP

XP_008445374.1 PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis melo]4.8e-23793.37Show/hide
Query:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF
        SMQRNCEASIKCL+NNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNS SWPAFHFESQKVQQC+M+ASDCQF
Subjt:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF

Query:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
        YSLPVENRFQY PFKMFE NY CD+RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
Subjt:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD

Query:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN
        RGVTLNEALL HDKWLEK+GIKNTNF VVTWSNWDCRVML+SECRFKKI+KPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGL W+GRAHCGLDDAKN
Subjt:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN

Query:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH
        TARLLAL+MH+GFRFSITNSLMWQTTDCPLQWKQSPE V+ P QPPMKPKP+HIP+VQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH
Subjt:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH

Query:  YFEWASP
        YFEWASP
Subjt:  YFEWASP

XP_022997162.1 3'-5' exoribonuclease 1-like [Cucurbita maxima]7.0e-23692.87Show/hide
Query:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF
        SMQRNCEASIKCL+NNG+PFSLQHSGNSADGFQELTDEISCH +NDIPETNH L NNFIERPNEFHNKPAYQHNSGSW AFHF+SQKVQQC+M+AS+CQF
Subjt:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF

Query:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
        YSLPVENRFQY PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ LSDFCRDLTGIQQIQVD
Subjt:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD

Query:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN
        RGVTLNEALL HDKWLEKKGIKNTNF VVTWSNWDCRVML+SECRFKKI+KPPYFNRWINLK+PFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN
Subjt:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN

Query:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH
        TARLLALLMHRGFRFSITNSLMWQT+DCP QWKQSPEA++LP QPPMKPKPVH+P++QY+PYCFCGVRSSRGMVRKPGPKQGS FFGCGNWTATKGARCH
Subjt:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH

Query:  YFEWASP
        YFEWASP
Subjt:  YFEWASP

XP_038885029.1 3'-5' exonuclease eri1-like [Benincasa hispida]4.4e-23893.12Show/hide
Query:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF
        SMQRNCEASIKCL+NNGMPFSLQHSGNSADGFQELTDEISC ANNDIPETNHPL+NNFIERPNEFHNKPAYQHNSGSWPAFHF+SQKVQQC+MN SDCQ 
Subjt:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF

Query:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
        YSLPVENR QYVPFKMFEQNYHC++RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
Subjt:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD

Query:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN
        RGVTLNEALL HDKWLEK+GIKNTNF VVTWSNWDCRVML+SECRFKKI+KPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGL+W+GRAHCGLDDAKN
Subjt:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN

Query:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH
        TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQ PE V+LPLQPPMKPKP+ +P++QYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARC 
Subjt:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH

Query:  YFEWASP
        YFEWASP
Subjt:  YFEWASP

TrEMBL top hitse value%identityAlignment
A0A0A0KDW9 Exonuclease domain-containing protein1.2e-23693.12Show/hide
Query:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF
        SMQRNCEASIKCL+NNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNS SWPAFHFESQKVQQC+M+ASDCQF
Subjt:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF

Query:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
        YSLPVENRFQY PFKMFE NY CD+RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
Subjt:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD

Query:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN
        RGVTLNEALL HDKWLEK+GIKNTNF VVTWSNWDCRVML+SECRFKKI+KPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGL W+GRAHCGLDDAKN
Subjt:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN

Query:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH
        TARLLAL+MH+GFRFSITNSLMWQTTDCPLQWKQSPE V+ P QPPMKPKP+HIP+VQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH
Subjt:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH

Query:  YFEWASP
        YFEWA+P
Subjt:  YFEWASP

A0A1S3BCJ6 3'-5' exoribonuclease 1-like2.3e-23793.37Show/hide
Query:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF
        SMQRNCEASIKCL+NNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNS SWPAFHFESQKVQQC+M+ASDCQF
Subjt:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF

Query:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
        YSLPVENRFQY PFKMFE NY CD+RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
Subjt:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD

Query:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN
        RGVTLNEALL HDKWLEK+GIKNTNF VVTWSNWDCRVML+SECRFKKI+KPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGL W+GRAHCGLDDAKN
Subjt:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN

Query:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH
        TARLLAL+MH+GFRFSITNSLMWQTTDCPLQWKQSPE V+ P QPPMKPKP+HIP+VQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH
Subjt:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH

Query:  YFEWASP
        YFEWASP
Subjt:  YFEWASP

A0A5A7VEQ6 3'-5' exoribonuclease 1-like1.8e-23792.93Show/hide
Query:  LSASMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASD
        L  SMQRNCEASIKCL+NNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNS SWPAFHFESQKVQQC+M+ASD
Subjt:  LSASMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASD

Query:  CQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQI
        CQFYSLPVENRFQY PFKMFE NY CD+RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIV+SVTG LEACFQTYVRPTCNQHLSDFCRDLTGIQQI
Subjt:  CQFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQI

Query:  QVDRGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDD
        QVDRGVTLNEALL HDKWLEK+GIKNTNF VVTWSNWDCRVML+SECRFKKI+KPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGL W+GRAHCGLDD
Subjt:  QVDRGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDD

Query:  AKNTARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGA
        AKNTARLLAL+MH+GFRFSITNSLMWQTTDCPLQWKQSPE V+ P QPPMKPKP+HIP+VQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGA
Subjt:  AKNTARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGA

Query:  RCHYFEWASP
        RCHYFEWASP
Subjt:  RCHYFEWASP

A0A6J1HFU9 uncharacterized protein LOC1114626431.2e-23392.14Show/hide
Query:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF
        SMQRNCEASIKCL+NNG+PFSLQHSGNSADGFQELTDEISCH +NDIPETNH L NNFIERPNEFHNKPAYQHNSGSW A HF+SQKVQQC+M+AS+CQF
Subjt:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF

Query:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
        YSLPVENRFQY PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ LSDFCRDLTGIQQIQVD
Subjt:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD

Query:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN
        RGVTLNEALL HDKWLEKKGIKNTNF VVTWSNWDCRVML+SECRFKKI+KPPYFNRWINLK+PFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN
Subjt:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN

Query:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH
        TARLLALLMHRGFRFSITNSLMWQT+DCP QWKQSP A++L  QPPMKPKPVH+P++QY+PYCFCGVRSSRGMVRKPGPKQGS FFGCGNWTATKGARCH
Subjt:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH

Query:  YFEWASP
        YFEWASP
Subjt:  YFEWASP

A0A6J1K486 3'-5' exoribonuclease 1-like3.4e-23692.87Show/hide
Query:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF
        SMQRNCEASIKCL+NNG+PFSLQHSGNSADGFQELTDEISCH +NDIPETNH L NNFIERPNEFHNKPAYQHNSGSW AFHF+SQKVQQC+M+AS+CQF
Subjt:  SMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDCQF

Query:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD
        YSLPVENRFQY PFKMFEQNYHCD RLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ LSDFCRDLTGIQQIQVD
Subjt:  YSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVD

Query:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN
        RGVTLNEALL HDKWLEKKGIKNTNF VVTWSNWDCRVML+SECRFKKI+KPPYFNRWINLK+PFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN
Subjt:  RGVTLNEALLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKN

Query:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH
        TARLLALLMHRGFRFSITNSLMWQT+DCP QWKQSPEA++LP QPPMKPKPVH+P++QY+PYCFCGVRSSRGMVRKPGPKQGS FFGCGNWTATKGARCH
Subjt:  TARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCH

Query:  YFEWASP
        YFEWASP
Subjt:  YFEWASP

SwissProt top hitse value%identityAlignment
A6QLH5 ERI1 exoribonuclease 38.5e-3540Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLMHDKWLEKKGI--KNTN
        Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L   D+W+ K+G+   N  
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLMHDKWLEKKGI--KNTN

Query:  FLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCN-LKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFRFSITN
         + VT  +WD +VML  +C++  +    YF +WINLK  +    G    N L +  +   L   GR H G+DD KN A ++  L +RGF F  T+
Subjt:  FLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCN-LKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFRFSITN

A8K979 ERI1 exoribonuclease 24.8e-3840.76Show/hide
Query:  QEFQYFVVIDFEATCDKD-RNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLMHDKWLEK-KGIKNTN
        Q F Y +VIDFE+TC  D ++ H QEIIEFP+V++++ TGQ+++ FQ YV+P  +  LS+FC +LTGI+Q QVD GV L   L    KW+ K +  KN  
Subjt:  QEFQYFVVIDFEATCDKD-RNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLMHDKWLEK-KGIKNTN

Query:  FLV---------------VTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMH
        F                 VTWS+WD  V L+ EC+ K++ KP + N WI+L+  ++  +      L  A++  G+ + GR H GLDD++NTA L   ++ 
Subjt:  FLV---------------VTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMH

Query:  RGFRFSITNSL
         G    IT SL
Subjt:  RGFRFSITNSL

O43414 ERI1 exoribonuclease 38.5e-3540Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLMHDKWLEKKGI--KNTN
        Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L+ FC +LTGI Q  VD   +L + L   D+W+ K+G+   N  
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLMHDKWLEKKGI--KNTN

Query:  FLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCN-LKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFRFSITN
         + VT  +WD +VML  +C++  +    YF +WINLK  +    G    N L +  +   L   GR H G+DD KN A ++  L +RGF F  T+
Subjt:  FLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCN-LKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFRFSITN

Q5BKS4 ERI1 exoribonuclease 27.0e-3739.34Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLMHDKWLEKKGIKNT-N
        Q + Y +V+DFE+TC  D   H   EIIEFP+V++++ TG++E+ F  YV+P  +  LS+FC +LTGI+Q+QVD GV L   L    KW+ K   + T +
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLMHDKWLEKKGIKNT-N

Query:  FLV---------------VTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMH
        F                 VTWS+WD  V L+ ECR K++ KP + N WI+L+  +R  +      L  A++  G+ + GR H GLDD++NTA L   ++ 
Subjt:  FLV---------------VTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMH

Query:  RGFRFSITNSL
         G    IT SL
Subjt:  RGFRFSITNSL

Q5HZL1 ERI1 exoribonuclease 23.7e-3840.48Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLMHDKWLEK----KGI--
        Q F+Y ++IDFE+TC KD     QEIIEFP+V+++   G++E+ F TYV+P  +  LSDFC +LTGI Q QVD GV L   L   + W++K    KGI  
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEALLMHDKWLEK----KGI--

Query:  ----------KNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR
                  ++     VTWS+WD  V L  ECR K+++KP   N WI+L+  ++  +      L  A++  G+ + GR H GLDD++NTA+L + ++  
Subjt:  ----------KNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHR

Query:  GFRFSITNSL
        G    IT SL
Subjt:  GFRFSITNSL

Arabidopsis top hitse value%identityAlignment
AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.6e-2027.94Show/hide
Query:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT------CNQHLSDFCRDLTGIQQIQVDRGVTLNEALLMHDKWLEKKGI
        QEF +F+VID E            EI+EFP +IV + T ++   F  +VRPT       N+++     +L G+ ++  D  +   + +   + WL +  +
Subjt:  QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT------CNQHLSDFCRDLTGIQQIQVDRGVTLNEALLMHDKWLEKKGI

Query:  --KNTNF-----LVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFR
          K+T++       VT  NWD +  +  +C    I  PPYF  WINLK  +   +G     +   +   G+   G  H G+DD KN  R++  ++  G  
Subjt:  --KNTNF-----LVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFR

Query:  FSIT
          +T
Subjt:  FSIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAACGATGGAGATTCTCTCTCTTATCTTTGACTGGGGAGTTTAACTCTAGGCTTGTTAGGAGGGATGAGACAGAGGAAGACTTGGATCATCTCCTTTGGAGTTG
CGAGTTTGCAAGATCTGTGTGTTTATTTTTCTTTCAGGGGTTTGGCTACTCATACATTCACCATAGGGACATTAGGGATATGATTGAGGAGTGTTCCTCCGTCCGCCTTT
TTAGGAGAAAGGGATGTTTTTTATGGCTTGCTGGGACGTGTGTGTTGTTATGGTATGCATGGGGTGTGAGGAACAATACAGTTTTTAGTGGTGTGGATAGAGAACCTGGC
AAGGTAGCATTTTTGTTAACTGGAGCTCTTTCAGCAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCGGAATAATGGAATGCCATTCAGTTTGCAACATAG
TGGAAATTCTGCTGATGGTTTCCAAGAACTTACAGATGAAATCAGTTGTCATGCCAACAATGATATTCCTGAAACAAACCACCCATTGGTTAACAATTTCATTGAACGTC
CAAATGAATTTCACAATAAACCTGCTTATCAGCATAATTCTGGATCATGGCCAGCCTTCCATTTTGAATCTCAGAAGGTGCAGCAGTGCAAGATGAATGCTTCTGATTGT
CAATTCTACTCTTTGCCAGTGGAGAACCGTTTCCAATATGTTCCTTTCAAAATGTTTGAACAGAATTACCATTGCGATCTTCGGTTGCAAGAGTTTCAATATTTTGTGGT
TATAGACTTTGAAGCAACGTGTGATAAAGATAGAAATCCACATCCACAGGAGATAATTGAGTTCCCATCTGTCATTGTAAGTAGTGTGACTGGCCAACTGGAAGCTTGCT
TTCAGACATATGTGCGCCCAACTTGCAATCAGCACTTGAGTGACTTCTGCAGGGATCTAACTGGCATTCAGCAAATTCAGGTGGACAGAGGTGTTACTCTCAATGAAGCT
CTCCTCATGCATGATAAATGGCTTGAAAAGAAGGGGATTAAGAATACAAATTTTTTAGTGGTAACTTGGTCAAACTGGGATTGCCGAGTCATGTTACAGTCAGAATGCCG
TTTCAAGAAGATTCAAAAGCCTCCATATTTCAACCGATGGATCAACTTAAAAATTCCATTTCGTGAGGTTTTCGGGGGAGCACAATGCAATCTAAAGGAAGCTGTTGAGA
TGGCAGGCTTAGCTTGGCAAGGTCGTGCTCATTGTGGTCTTGATGATGCCAAGAACACTGCTCGTCTACTTGCCCTTCTTATGCATAGAGGCTTCAGATTCTCCATCACC
AATTCATTGATGTGGCAGACCACTGACTGTCCATTGCAATGGAAACAATCCCCAGAAGCTGTGTCGCTCCCTCTGCAACCGCCGATGAAACCAAAGCCTGTGCACATTCC
CCTTGTCCAATACTTCCCATACTGTTTTTGTGGGGTTAGAAGCAGCAGGGGTATGGTTCGCAAGCCAGGACCAAAGCAAGGGAGTTTCTTCTTTGGCTGTGGGAACTGGA
CTGCTACTAAAGGGGCACGTTGCCATTACTTCGAGTGGGCCTCTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAACGATGGAGATTCTCTCTCTTATCTTTGACTGGGGAGTTTAACTCTAGGCTTGTTAGGAGGGATGAGACAGAGGAAGACTTGGATCATCTCCTTTGGAGTTG
CGAGTTTGCAAGATCTGTGTGTTTATTTTTCTTTCAGGGGTTTGGCTACTCATACATTCACCATAGGGACATTAGGGATATGATTGAGGAGTGTTCCTCCGTCCGCCTTT
TTAGGAGAAAGGGATGTTTTTTATGGCTTGCTGGGACGTGTGTGTTGTTATGGTATGCATGGGGTGTGAGGAACAATACAGTTTTTAGTGGTGTGGATAGAGAACCTGGC
AAGGTAGCATTTTTGTTAACTGGAGCTCTTTCAGCAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCGGAATAATGGAATGCCATTCAGTTTGCAACATAG
TGGAAATTCTGCTGATGGTTTCCAAGAACTTACAGATGAAATCAGTTGTCATGCCAACAATGATATTCCTGAAACAAACCACCCATTGGTTAACAATTTCATTGAACGTC
CAAATGAATTTCACAATAAACCTGCTTATCAGCATAATTCTGGATCATGGCCAGCCTTCCATTTTGAATCTCAGAAGGTGCAGCAGTGCAAGATGAATGCTTCTGATTGT
CAATTCTACTCTTTGCCAGTGGAGAACCGTTTCCAATATGTTCCTTTCAAAATGTTTGAACAGAATTACCATTGCGATCTTCGGTTGCAAGAGTTTCAATATTTTGTGGT
TATAGACTTTGAAGCAACGTGTGATAAAGATAGAAATCCACATCCACAGGAGATAATTGAGTTCCCATCTGTCATTGTAAGTAGTGTGACTGGCCAACTGGAAGCTTGCT
TTCAGACATATGTGCGCCCAACTTGCAATCAGCACTTGAGTGACTTCTGCAGGGATCTAACTGGCATTCAGCAAATTCAGGTGGACAGAGGTGTTACTCTCAATGAAGCT
CTCCTCATGCATGATAAATGGCTTGAAAAGAAGGGGATTAAGAATACAAATTTTTTAGTGGTAACTTGGTCAAACTGGGATTGCCGAGTCATGTTACAGTCAGAATGCCG
TTTCAAGAAGATTCAAAAGCCTCCATATTTCAACCGATGGATCAACTTAAAAATTCCATTTCGTGAGGTTTTCGGGGGAGCACAATGCAATCTAAAGGAAGCTGTTGAGA
TGGCAGGCTTAGCTTGGCAAGGTCGTGCTCATTGTGGTCTTGATGATGCCAAGAACACTGCTCGTCTACTTGCCCTTCTTATGCATAGAGGCTTCAGATTCTCCATCACC
AATTCATTGATGTGGCAGACCACTGACTGTCCATTGCAATGGAAACAATCCCCAGAAGCTGTGTCGCTCCCTCTGCAACCGCCGATGAAACCAAAGCCTGTGCACATTCC
CCTTGTCCAATACTTCCCATACTGTTTTTGTGGGGTTAGAAGCAGCAGGGGTATGGTTCGCAAGCCAGGACCAAAGCAAGGGAGTTTCTTCTTTGGCTGTGGGAACTGGA
CTGCTACTAAAGGGGCACGTTGCCATTACTTCGAGTGGGCCTCTCCCTGATGCATGGAATGGTTTATGAATCTTCTTATTGAAGCATTCACTAAATGAATTTATGT
Protein sequenceShow/hide protein sequence
MEKRWRFSLLSLTGEFNSRLVRRDETEEDLDHLLWSCEFARSVCLFFFQGFGYSYIHHRDIRDMIEECSSVRLFRRKGCFLWLAGTCVLLWYAWGVRNNTVFSGVDREPG
KVAFLLTGALSASMQRNCEASIKCLRNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFESQKVQQCKMNASDC
QFYSLPVENRFQYVPFKMFEQNYHCDLRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCRDLTGIQQIQVDRGVTLNEA
LLMHDKWLEKKGIKNTNFLVVTWSNWDCRVMLQSECRFKKIQKPPYFNRWINLKIPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFRFSIT
NSLMWQTTDCPLQWKQSPEAVSLPLQPPMKPKPVHIPLVQYFPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP