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Clc08G03010 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G03010
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:6477935..6479803
RNA-Seq ExpressionClc08G03010
SyntenyClc08G03010
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039201.1 uncharacterized protein E6C27_scaffold121G001180 [Cucumis melo var. makuwa]4.0e-3778.7Show/hide
Query:  MKDSSEKSKKQVDDEETGLH--SHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPP
        MKDS+EKSKKQ D+ E+ LH   HC I LTI DSI QAFIAILRF GF  N PPYRP  SS EDCYTAGS+PPSTAVDPP D+SEEESEYYRPHVPPPPP
Subjt:  MKDSSEKSKKQVDDEETGLH--SHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPP

Query:  WSTGGGGQ
        WSTGGGGQ
Subjt:  WSTGGGGQ

KAG7024354.1 hypothetical protein SDJN02_13168 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-1449.07Show/hide
Query:  MKDSSEKSKKQVDDEETGLHSHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPPWS
        M++S+ K+ K  D  E  +HSH     T+CD I   FIAIL + GFNH G  YRPTP                      DE EEESEY+R H PPPPPWS
Subjt:  MKDSSEKSKKQVDDEETGLHSHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPPWS

Query:  TGGGGQTD
        TGGGGQTD
Subjt:  TGGGGQTD

XP_004138360.2 uncharacterized protein LOC101208454 [Cucumis sativus]8.3e-3574.55Show/hide
Query:  MKDSSEKSKKQVDDEETGLH--SHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPP
        MK S+EKSKKQ DD E+ LH   HC I LTI DSI Q FI+ILRF GF  + PPYRP  SS EDCYTAGS+PPSTAVDPP D+SEEESEYYRPHVPP PP
Subjt:  MKDSSEKSKKQVDDEETGLH--SHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPP

Query:  WSTGGGGQTD
        WSTGGGGQ D
Subjt:  WSTGGGGQTD

XP_008464348.1 PREDICTED: uncharacterized protein LOC103502256 [Cucumis melo]4.0e-3778.7Show/hide
Query:  MKDSSEKSKKQVDDEETGLH--SHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPP
        MKDS+EKSKKQ D+ E+ LH   HC I LTI DSI QAFIAILRF GF  N PPYRP  SS EDCYTAGS+PPSTAVDPP D+SEEESEYYRPHVPPPPP
Subjt:  MKDSSEKSKKQVDDEETGLH--SHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPP

Query:  WSTGGGGQ
        WSTGGGGQ
Subjt:  WSTGGGGQ

XP_038886557.1 uncharacterized protein LOC120076731 [Benincasa hispida]3.2e-4790.65Show/hide
Query:  DSSEKSKKQV-DDEETGLHSHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPPWST
        DS EKSKKQV DD+ET LHSHC IFL ICDSI QAFIAILRFLGFNHNGPPYRP PSSPEDCYT GSDPPSTAV+PPDDESEEESEYYRPHVPPPPPWST
Subjt:  DSSEKSKKQV-DDEETGLHSHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPPWST

Query:  GGGGQTD
        GGGGQTD
Subjt:  GGGGQTD

TrEMBL top hitse value%identityAlignment
A0A0A0KBZ4 Uncharacterized protein4.0e-3574.55Show/hide
Query:  MKDSSEKSKKQVDDEETGLH--SHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPP
        MK S+EKSKKQ DD E+ LH   HC I LTI DSI Q FI+ILRF GF  + PPYRP  SS EDCYTAGS+PPSTAVDPP D+SEEESEYYRPHVPP PP
Subjt:  MKDSSEKSKKQVDDEETGLH--SHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPP

Query:  WSTGGGGQTD
        WSTGGGGQ D
Subjt:  WSTGGGGQTD

A0A1S3CLD8 uncharacterized protein LOC1035022561.9e-3778.7Show/hide
Query:  MKDSSEKSKKQVDDEETGLH--SHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPP
        MKDS+EKSKKQ D+ E+ LH   HC I LTI DSI QAFIAILRF GF  N PPYRP  SS EDCYTAGS+PPSTAVDPP D+SEEESEYYRPHVPPPPP
Subjt:  MKDSSEKSKKQVDDEETGLH--SHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPP

Query:  WSTGGGGQ
        WSTGGGGQ
Subjt:  WSTGGGGQ

A0A1S3CMT1 uncharacterized protein LOC1035022557.4e-1346.79Show/hide
Query:  MKDSSEKSKKQVDDEETGLHSHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPP-DDESEEESEYYRPHVPPPPPW
        +++S+E +K+  DD    +H HC  FL+I + +FQ  +A  RFLGF      +RP  SS ED Y   S PP T VDPP +D  EEE E+ R + PPPPP 
Subjt:  MKDSSEKSKKQVDDEETGLHSHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPP-DDESEEESEYYRPHVPPPPPW

Query:  STGGGGQTD
        S GGGG+T+
Subjt:  STGGGGQTD

A0A5A7T6U0 Uncharacterized protein7.4e-1346.79Show/hide
Query:  MKDSSEKSKKQVDDEETGLHSHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPP-DDESEEESEYYRPHVPPPPPW
        +++S+E +K+  DD    +H HC  FL+I + +FQ  +A  RFLGF      +RP  SS ED Y   S PP T VDPP +D  EEE E+ R + PPPPP 
Subjt:  MKDSSEKSKKQVDDEETGLHSHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPP-DDESEEESEYYRPHVPPPPPW

Query:  STGGGGQTD
        S GGGG+T+
Subjt:  STGGGGQTD

A0A5D3D4J4 Uncharacterized protein1.9e-3778.7Show/hide
Query:  MKDSSEKSKKQVDDEETGLH--SHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPP
        MKDS+EKSKKQ D+ E+ LH   HC I LTI DSI QAFIAILRF GF  N PPYRP  SS EDCYTAGS+PPSTAVDPP D+SEEESEYYRPHVPPPPP
Subjt:  MKDSSEKSKKQVDDEETGLH--SHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPP

Query:  WSTGGGGQ
        WSTGGGGQ
Subjt:  WSTGGGGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGATTCGAGTGAAAAGAGCAAGAAGCAGGTGGATGATGAAGAAACTGGTCTTCATTCTCACTGTCATATCTTTTTAACGATCTGTGATTCAATCTTTCAAGCTTT
CATCGCCATTTTGAGGTTCTTAGGTTTTAATCACAATGGACCACCTTACCGTCCGACGCCCTCCTCACCGGAGGATTGCTACACGGCCGGCTCAGATCCGCCTTCCACGG
CGGTCGACCCACCCGACGACGAATCTGAGGAAGAAAGTGAGTACTACAGGCCACATGTTCCTCCTCCGCCGCCGTGGAGCACCGGCGGCGGTGGTCAGACTGACTAA
mRNA sequenceShow/hide mRNA sequence
TGATATTTAAAGCCTATTTAAGAGACACAAAAAGAGACAGAGAAAGACTCTTGTCGGCAAAAACGAAGATTCGAGATACGAATTCAAAACTTTTGAAGAAAAAAGGAAAA
GGAATGAAGGATTCGAGTGAAAAGAGCAAGAAGCAGGTGGATGATGAAGAAACTGGTCTTCATTCTCACTGTCATATCTTTTTAACGATCTGTGATTCAATCTTTCAAGC
TTTCATCGCCATTTTGAGGTTCTTAGGTTTTAATCACAATGGACCACCTTACCGTCCGACGCCCTCCTCACCGGAGGATTGCTACACGGCCGGCTCAGATCCGCCTTCCA
CGGCGGTCGACCCACCCGACGACGAATCTGAGGAAGAAAGTGAGTACTACAGGCCACATGTTCCTCCTCCGCCGCCGTGGAGCACCGGCGGCGGTGGTCAGACTGACTAA
GATATTGTGATATAATCAGCGGCGGTGCTATTTTGTAATCAAAGTATTGTTGGAGATCGATCTCTGTAGCTATGTTGTAATATGCGTATTACAGTGTATATATAATGAAT
TAGCAAAAAGAAAACGCCGAGCTTCTTCATTTGTGCATCCATGTAAAAACTTTAAGGTTGGTTGTTATATAGGTTATGTCGGGTAAAGAATTTGAAAATAAAAATTTAAA
ATTCAGGAATTCAATAC
Protein sequenceShow/hide protein sequence
MKDSSEKSKKQVDDEETGLHSHCHIFLTICDSIFQAFIAILRFLGFNHNGPPYRPTPSSPEDCYTAGSDPPSTAVDPPDDESEEESEYYRPHVPPPPPWSTGGGGQTD