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Clc08G03165 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G03165
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncucumber peeling cupredoxin-like
Genome locationClcChr08:7351237..7352643
RNA-Seq ExpressionClc08G03165
SyntenyClc08G03165
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR003245 - Phytocyanin domain
IPR008972 - Cupredoxin
IPR039391 - Phytocyanin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025138.1 hypothetical protein SDJN02_13961, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-5468.99Show/hide
Query:  TMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNNHLG
        ++GS+  L  +GT+  V VA+DHEVGGDFGWNLP TLTFFSEWARN TFFVGDRLKFIPRANE+HTYAEA+S+KD+D C+E+GIVFDS+IILTL N    
Subjt:  TMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNNHLG

Query:  PR--FFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFF
        PR  +F+CTDGNHCN GMKF+I VLPK+ T PN A+KI      P+L FITIMAN+FF
Subjt:  PR--FFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFF

XP_008463059.1 PREDICTED: umecyanin-like [Cucumis melo]4.8e-6375.47Show/hide
Query:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNN
        MS  M SL  LF +G++F V V IDH+VGGDFGWNLPPTLTF+SEWARNNTFF+ DRL+FI RANE+HT++EA S+KDFDECV++GIVFD+SII TLQNN
Subjt:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNN

Query:  HLGPRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFF
         LGPR+FICTDGNHCNMGMKFT+ VLP SVT+PNTAVK  G+L  PILFFIT+MANLFF
Subjt:  HLGPRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFF

XP_022974069.1 cucumber peeling cupredoxin-like [Cucurbita maxima]1.1e-5469.33Show/hide
Query:  MSTTMG---SLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTL
        M+ TMG   S+  L ++GT+  V VA+DHEVGGDFGWNLPPTLTFFSEWARN TFFVGDRLKF+PRANE+HTYAEA+S+KD+D C+E+GIVFDSSIILTL
Subjt:  MSTTMG---SLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTL

Query:  QNNHLGPRFFICTDGNHCNMGMKFTIHVLPKS-VTMPNTAVKIHGLLPMPILFFITIMANLFF
         +N    R+F+CTDGNHCN GMKF+I VLPKS  T PN A+KI      P+L FITIMAN+FF
Subjt:  QNNHLGPRFFICTDGNHCNMGMKFTIHVLPKS-VTMPNTAVKIHGLLPMPILFFITIMANLFF

XP_031742403.1 umecyanin-like [Cucumis sativus]2.7e-6174.84Show/hide
Query:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNN
        MS  MGSLT LFL+G++FHV VAIDH+VGGDFGWNLPPTLTF+SEWARNNTFF+ D L+F+ R NE+HT++EA S+KDFDECV++GIVFD+SI  TLQNN
Subjt:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNN

Query:  HLGPRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFF
         LGPR+F+CTDGNHC+MGMKFTI VLPKSV MPNTAV+ +G+L  PILFFITI+ANL F
Subjt:  HLGPRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFF

XP_038884426.1 umecyanin-like [Benincasa hispida]1.3e-6883.75Show/hide
Query:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNN
        MS TM SLT LFL GT FHV VAIDHEVGGDFGWNLPPTLTFFS+WARNNTFFVGDRL+F PRANE+HTYAEAKSEK+FDECVE+GIVFD SIILTLQNN
Subjt:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNN

Query:  HLGPRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFFF
         LG R+FICTDGNHCNMGMKFTI VLP SVT PNTAVKI  LL  PIL FI  MANLFFF
Subjt:  HLGPRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFFF

TrEMBL top hitse value%identityAlignment
A0A1S3CJX2 umecyanin-like2.3e-6375.47Show/hide
Query:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNN
        MS  M SL  LF +G++F V V IDH+VGGDFGWNLPPTLTF+SEWARNNTFF+ DRL+FI RANE+HT++EA S+KDFDECV++GIVFD+SII TLQNN
Subjt:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNN

Query:  HLGPRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFF
         LGPR+FICTDGNHCNMGMKFT+ VLP SVT+PNTAVK  G+L  PILFFIT+MANLFF
Subjt:  HLGPRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFF

A0A6J1DQ85 cucumber peeling cupredoxin-like1.2e-3854.66Show/hide
Query:  MSTTMG-SLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQN
        M+TTM  SL   F +G + HV VA+DH VGGDFGWNLPP  TFFS+WARN TFFV D+L F  +AN +HT A+ +S+ DFD CV+ GIVFD   I+ +  
Subjt:  MSTTMG-SLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQN

Query:  NHLGPRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFFF
        +  G  +FI T GN CN GMKF I+VLP+S   PN AV+      + +L FITI+ANL FF
Subjt:  NHLGPRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFFF

A0A6J1E367 umecyanin-like5.3e-4760Show/hide
Query:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNN
        MSTT  SL  LF +G + HV V +D+++GGDFGWNLPPTLTFFSEWARN+TFFVGD L+FIPRANE+HT+AE++S+ +FD CV+EG+VFDS+I +TL  +
Subjt:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNN

Query:  HLGPRFFICTDGNHCNMGMKFTIHVLPKSVT---MPNTAVKIHGLLPMPILFFITIMANLFFFFL
          G R+F+ TDGNHCNMGMKF I V  +S T    PN AVK+  L   P+LFF T+   + FFF+
Subjt:  HLGPRFFICTDGNHCNMGMKFTIHVLPKSVT---MPNTAVKIHGLLPMPILFFITIMANLFFFFL

A0A6J1EW61 cucumber peeling cupredoxin-like3.4e-5467.95Show/hide
Query:  TMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNNHLG
        ++GS+  L  +GT+  V VA+DHEVGGDFGWNLPP LTFFS+WARN TFFVGDRLKFIPRANE+HTY EA+S+KD+D C+E+GIVFDS+IILTL +N   
Subjt:  TMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNNHLG

Query:  PRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFF
         R+F+CTDGNHCN GMKF+I VLPK+ T PN A+KI      P+L FITIMAN+FF
Subjt:  PRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFF

A0A6J1IGG2 cucumber peeling cupredoxin-like5.2e-5569.33Show/hide
Query:  MSTTMG---SLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTL
        M+ TMG   S+  L ++GT+  V VA+DHEVGGDFGWNLPPTLTFFSEWARN TFFVGDRLKF+PRANE+HTYAEA+S+KD+D C+E+GIVFDSSIILTL
Subjt:  MSTTMG---SLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTL

Query:  QNNHLGPRFFICTDGNHCNMGMKFTIHVLPKS-VTMPNTAVKIHGLLPMPILFFITIMANLFF
         +N    R+F+CTDGNHCN GMKF+I VLPKS  T PN A+KI      P+L FITIMAN+FF
Subjt:  QNNHLGPRFFICTDGNHCNMGMKFTIHVLPKS-VTMPNTAVKIHGLLPMPILFFITIMANLFF

SwissProt top hitse value%identityAlignment
P29602 Cucumber peeling cupredoxin1.3e-1333.08Show/hide
Query:  HEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDEC----VEEGIVFDSSIILTLQNNHLGPRFFICTDGNHCNMGMKF
        H VG + GW++P +  F+S+WA   TF VGD L+F   AN +H   E ++++ FD C     +  +   S +I  L  + LG  +F+CT G HC+ G K 
Subjt:  HEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDEC----VEEGIVFDSSIILTLQNNHLGPRFFICTDGNHCNMGMKF

Query:  TIHVLPKSVTM---PNTAVKIHGLLPMPIL
        +I+V+  + T+   P ++     ++P P++
Subjt:  TIHVLPKSVTM---PNTAVKIHGLLPMPIL

P42849 Umecyanin2.0e-1136.89Show/hide
Query:  DHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEG-IVFDSSIILTLQNNHLGPRFFICTDGNHCNMGMKFTI
        D++VGGD  W  P    F+  WA   TF VGD L+F   A   H  A    +  FD C +E  I   ++  + +  N  GP+++ICT G+HC +G K +I
Subjt:  DHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEG-IVFDSSIILTLQNNHLGPRFFICTDGNHCNMGMKFTI

Query:  HVL
        +V+
Subjt:  HVL

Q07488 Blue copper protein4.0e-1234.85Show/hide
Query:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSI-ILTLQN
        M+    ++T+L LV     V  A D++VG D  W  P    F++ WA   TF VGD L+F   A   H  A   SE  F+ C +E  +   ++  + +  
Subjt:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSI-ILTLQN

Query:  NHLGPRFFICTDGNHCNMGMKFTIHVLPKSVT
        N  GP++FICT G+HC  G K +I V+    T
Subjt:  NHLGPRFFICTDGNHCNMGMKFTIHVLPKSVT

Arabidopsis top hitse value%identityAlignment
AT2G31050.1 Cupredoxin superfamily protein1.2e-0631.3Show/hide
Query:  TYLFLVGTIFHVAV-AIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDEC--------VEEGIVFDSSIILTLQN
        T L ++  +F ++V    H+VG   GW +      +  WA   TF VGD L F  + N+        +  D++ C         E G      +ILT   
Subjt:  TYLFLVGTIFHVAV-AIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDEC--------VEEGIVFDSSIILTLQN

Query:  NHLGPRFFICTDGNHCNMGMKFTIHVLPKSV
           G + FIC    HC+MG K  IHVLP S+
Subjt:  NHLGPRFFICTDGNHCNMGMKFTIHVLPKSV

AT3G18590.1 early nodulin-like protein 54.4e-0625.95Show/hide
Query:  MSTTMGSLTYLFLVG-TIFHVAVAIDHEVGGDFGWNLPPTLTF---FSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDEC-VEEGIVFDSSIIL
        M ++   +  +FLV   +F    + + EVGG+ GW +P + T    F++WA +N F VGD L+F      +       SE+++ +C   +  ++ ++   
Subjt:  MSTTMGSLTYLFLVG-TIFHVAVAIDHEVGGDFGWNLPPTLTF---FSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDEC-VEEGIVFDSSIIL

Query:  TLQNNHLGPRFFICTDGNHCNMGMKFTIHVL
          + +  G  +FI     HC  G K  + V+
Subjt:  TLQNNHLGPRFFICTDGNHCNMGMKFTIHVL

AT3G20570.1 early nodulin-like protein 99.6e-0927.78Show/hide
Query:  GSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIV---FDSSIILTLQNNHL
        G L +L +V      A A +  VGG  GW +P     +S+WA  + F +GD L F+ ++N+       +    +D C  +       D    +TL  NH 
Subjt:  GSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIV---FDSSIILTLQNNHL

Query:  GPRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMP
        GP +FI  + ++C    K  + V+       NTA       P P
Subjt:  GPRFFICTDGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMP

AT5G20230.1 blue-copper-binding protein2.9e-1334.85Show/hide
Query:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSI-ILTLQN
        M+    ++T+L LV     V  A D++VG D  W  P    F++ WA   TF VGD L+F   A   H  A   SE  F+ C +E  +   ++  + +  
Subjt:  MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSI-ILTLQN

Query:  NHLGPRFFICTDGNHCNMGMKFTIHVLPKSVT
        N  GP++FICT G+HC  G K +I V+    T
Subjt:  NHLGPRFFICTDGNHCNMGMKFTIHVLPKSVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACAACAATGGGTTCCCTTACATATCTCTTCCTTGTCGGAACTATCTTCCACGTTGCTGTTGCTATCGACCACGAGGTTGGAGGTGATTTTGGTTGGAACTTACC
CCCAACTCTCACATTTTTCTCTGAGTGGGCTCGTAATAACACTTTCTTTGTTGGCGATAGACTAAAATTCATACCAAGAGCCAACGAGAGTCACACTTATGCTGAAGCAA
AATCTGAGAAGGATTTTGATGAATGTGTAGAGGAGGGAATAGTTTTCGATTCTTCAATAATTTTAACCCTACAAAATAATCATCTTGGTCCTCGTTTTTTTATCTGCACT
GATGGAAACCATTGCAACATGGGCATGAAATTTACCATTCACGTTTTACCCAAATCAGTAACAATGCCAAATACCGCGGTCAAAATTCATGGGCTGCTGCCTATGCCTAT
ACTTTTCTTCATCACTATTATGGCTAATCTCTTCTTCTTCTTCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTACAACAATGGGTTCCCTTACATATCTCTTCCTTGTCGGAACTATCTTCCACGTTGCTGTTGCTATCGACCACGAGGTTGGAGGTGATTTTGGTTGGAACTTACC
CCCAACTCTCACATTTTTCTCTGAGTGGGCTCGTAATAACACTTTCTTTGTTGGCGATAGACTAAAATTCATACCAAGAGCCAACGAGAGTCACACTTATGCTGAAGCAA
AATCTGAGAAGGATTTTGATGAATGTGTAGAGGAGGGAATAGTTTTCGATTCTTCAATAATTTTAACCCTACAAAATAATCATCTTGGTCCTCGTTTTTTTATCTGCACT
GATGGAAACCATTGCAACATGGGCATGAAATTTACCATTCACGTTTTACCCAAATCAGTAACAATGCCAAATACCGCGGTCAAAATTCATGGGCTGCTGCCTATGCCTAT
ACTTTTCTTCATCACTATTATGGCTAATCTCTTCTTCTTCTTCCTTTGA
Protein sequenceShow/hide protein sequence
MSTTMGSLTYLFLVGTIFHVAVAIDHEVGGDFGWNLPPTLTFFSEWARNNTFFVGDRLKFIPRANESHTYAEAKSEKDFDECVEEGIVFDSSIILTLQNNHLGPRFFICT
DGNHCNMGMKFTIHVLPKSVTMPNTAVKIHGLLPMPILFFITIMANLFFFFL