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Clc08G04080 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G04080
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:11955762..11957950
RNA-Seq ExpressionClc08G04080
SyntenyClc08G04080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038880159.1 uncharacterized protein LOC120071839 [Benincasa hispida]8.3e-1362.67Show/hide
Query:  LYKREVKSAKRFVQGLRDVVRRIVQALELATYATTFRTIARVGYPTGIEYMKTLAVESTLGQKRKVEQRTPEPPQ
        L   E K A+RFVQGLRD VR IVQALE   YAT FR  ARVGYP+GIE+ K+L  E   GQKRKVEQ+   P Q
Subjt:  LYKREVKSAKRFVQGLRDVVRRIVQALELATYATTFRTIARVGYPTGIEYMKTLAVESTLGQKRKVEQRTPEPPQ
XP_038880466.1 uncharacterized protein LOC120072126 [Benincasa hispida]5.4e-0441.89Show/hide
Query:  LYKREVKSAKRFVQGLRDVVRRIVQALELATYATTFRTIARVGYPT--GIEYMKTLAVESTLGQKRKVEQRTPE
        L   E    +RF+QGLR  +R +V AL+L TYAT  R + R+   +  G EY K   + ++ GQKRK +Q+T E
Subjt:  LYKREVKSAKRFVQGLRDVVRRIVQALELATYATTFRTIARVGYPT--GIEYMKTLAVESTLGQKRKVEQRTPE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGAGGAAATGACACCACAAGCTAGAGGAAGAGGCAGTCATGGATTGAATGCCAGAAGGGTTGAAATCCTGAGGCTTGAGGCTGGGAAGGATCCTCAGCCGCCTAG
TGGCCAGACTGGGTCAGGATGGCAAAAAGTTAGACTTGAGATACGTCTGCACCTTCGTAGGCACAACCCCCCCTCCCCCCCATGTTGTCCAAGCAGAGTATACTGCTATG
GTTGCAATGATAGGAGAGGGGACATGAGACCAGTTCAAGGGAAGATTCTACGAAAAGTACATCTCTACAAACGTGAGGTCAAGAGTGCCAAAAGATTTGTTCAAGGACTA
AGGGATGTGGTGCGACGTATCGTACAAGCTCTTGAGTTGGCTACCTATGCAACAACATTTCGCACAATAGCACGGGTAGGCTACCCAACAGGGATTGAGTACATGAAAAC
TTTGGCAGTAGAATCCACCTTAGGCCAGAAAAGGAAAGTCGAACAGAGAACTCCAGAGCCTCCACAGAATAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTGAGGAAATGACACCACAAGCTAGAGGAAGAGGCAGTCATGGATTGAATGCCAGAAGGGTTGAAATCCTGAGGCTTGAGGCTGGGAAGGATCCTCAGCCGCCTAG
TGGCCAGACTGGGTCAGGATGGCAAAAAGTTAGACTTGAGATACGTCTGCACCTTCGTAGGCACAACCCCCCCTCCCCCCCATGTTGTCCAAGCAGAGTATACTGCTATG
GTTGCAATGATAGGAGAGGGGACATGAGACCAGTTCAAGGGAAGATTCTACGAAAAGTACATCTCTACAAACGTGAGGTCAAGAGTGCCAAAAGATTTGTTCAAGGACTA
AGGGATGTGGTGCGACGTATCGTACAAGCTCTTGAGTTGGCTACCTATGCAACAACATTTCGCACAATAGCACGGGTAGGCTACCCAACAGGGATTGAGTACATGAAAAC
TTTGGCAGTAGAATCCACCTTAGGCCAGAAAAGGAAAGTCGAACAGAGAACTCCAGAGCCTCCACAGAATAGCTAG
Protein sequenceShow/hide protein sequence
MLEEMTPQARGRGSHGLNARRVEILRLEAGKDPQPPSGQTGSGWQKVRLEIRLHLRRHNPPSPPCCPSRVYCYGCNDRRGDMRPVQGKILRKVHLYKREVKSAKRFVQGL
RDVVRRIVQALELATYATTFRTIARVGYPTGIEYMKTLAVESTLGQKRKVEQRTPEPPQNS