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Clc08G04520 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G04520
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:13635715..13640355
RNA-Seq ExpressionClc08G04520
SyntenyClc08G04520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026180.1 hypothetical protein E6C27_scaffold19G001410 [Cucumis melo var. makuwa]1.5e-0767.8Show/hide
Query:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLAKAS
        G  PS SS STP+ MS +QYAMDLGFTT+TQS++ SS IQIGS  ESST PPRP A  S
Subjt:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLAKAS

KAA0047770.1 hypothetical protein E6C27_scaffold1059G00330 [Cucumis melo var. makuwa]1.9e-0769.64Show/hide
Query:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLA
        G  PSFSS S P+ MS DQYAMDLGFT +TQS++ SSGI IGS  ESST PPRP A
Subjt:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLA

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]3.3e-0768.52Show/hide
Query:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRP
        G RPS SS STP+ MS DQYAMDLGFTT+T+S++ SS I+IGS  ESST PP+P
Subjt:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRP

KAA0053156.1 hypothetical protein E6C27_scaffold1248G00100 [Cucumis melo var. makuwa]6.6e-0871.43Show/hide
Query:  GKRPSFSSS-TPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLA
        G RPS SS+  P+ MSVDQYAM LGFTT+TQSK+ SSGI+IGS  ES T PPRPLA
Subjt:  GKRPSFSSS-TPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLA

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]9.5e-0751.85Show/hide
Query:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLAKASTSDVNLTNESLQIAKIKHQLQN
        G RPS SS S P+ MS DQYAMDLGFTT+T+S+A SS IQIGS  +SST PPR     S + +  ++E +Q+  +   L N
Subjt:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLAKASTSDVNLTNESLQIAKIKHQLQN

TrEMBL top hitse value%identityAlignment
A0A5A7U8A0 Uncharacterized protein1.6e-0768.52Show/hide
Query:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRP
        G RPS SS STP+ MS DQYAMDLGFTT+T+S++ SS I+IGS  ESST PP+P
Subjt:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRP

A0A5A7UFZ9 Uncharacterized protein3.2e-0871.43Show/hide
Query:  GKRPSFSSS-TPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLA
        G RPS SS+  P+ MSVDQYAM LGFTT+TQSK+ SSGI+IGS  ES T PPRPLA
Subjt:  GKRPSFSSS-TPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLA

A0A5A7URX0 Uncharacterized protein4.6e-0767.86Show/hide
Query:  GKRPSFSSS-TPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLA
        G RPS SS+  P+ MS DQYAMDL FTTIT+S++ SSGI+IGS  ESST PPRP A
Subjt:  GKRPSFSSS-TPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLA

A0A5D3BW12 Uncharacterized protein9.3e-0869.64Show/hide
Query:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLA
        G  PSFSS S P+ MS DQYAMDLGFT +TQS++ SSGI IGS  ESST PPRP A
Subjt:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLA

A0A5D3E4M7 Uncharacterized protein7.1e-0867.8Show/hide
Query:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLAKAS
        G  PS SS STP+ MS +QYAMDLGFTT+TQS++ SS IQIGS  ESST PPRP A  S
Subjt:  GKRPSFSS-STPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLAKAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCTATGAAGCACAAATACGGCAAACGCCCATCCTTTTCTTCCTCTACACCCGCTCTAATGAGCGTAGACCAATATGCGATGGATTTAGGGTTTACCACGATAAC
CCAGTCCAAAGCCCTCTCCTCTGGCATACAGATTGGATCGTCAATGGAGTCATCTACTCTGCCACCAAGGCCTTTGGCCAAAGCTTCCACTAGTGATGTTAACCTTACCA
ATGAATCTTTGCAAATAGCAAAGATTAAGCACCAACTCCAGAACTGGGGACTACCCATAGCAGTGCAGATAGCACTAAGACCTATGTTTAGATCCGGACTAGATAATCTT
GTTCTTGCAATCCTCAAGGATAAGAGGCATAAAAACTTTGCAAATTCCCTCTTAAGAATTATCGAATCAAATCAGATAGGACAGAACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCTATGAAGCACAAATACGGCAAACGCCCATCCTTTTCTTCCTCTACACCCGCTCTAATGAGCGTAGACCAATATGCGATGGATTTAGGGTTTACCACGATAAC
CCAGTCCAAAGCCCTCTCCTCTGGCATACAGATTGGATCGTCAATGGAGTCATCTACTCTGCCACCAAGGCCTTTGGCCAAAGCTTCCACTAGTGATGTTAACCTTACCA
ATGAATCTTTGCAAATAGCAAAGATTAAGCACCAACTCCAGAACTGGGGACTACCCATAGCAGTGCAGATAGCACTAAGACCTATGTTTAGATCCGGACTAGATAATCTT
GTTCTTGCAATCCTCAAGGATAAGAGGCATAAAAACTTTGCAAATTCCCTCTTAAGAATTATCGAATCAAATCAGATAGGACAGAACCCTTGA
Protein sequenceShow/hide protein sequence
MLSMKHKYGKRPSFSSSTPALMSVDQYAMDLGFTTITQSKALSSGIQIGSSMESSTLPPRPLAKASTSDVNLTNESLQIAKIKHQLQNWGLPIAVQIALRPMFRSGLDNL
VLAILKDKRHKNFANSLLRIIESNQIGQNP