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Clc08G04553 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G04553
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLipoxygenase
Genome locationClcChr08:13742796..13783607
RNA-Seq ExpressionClc08G04553
SyntenyClc08G04553
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0034440 - lipid oxidation (biological process)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR013819 - Lipoxygenase, C-terminal
IPR036226 - Lipoxigenase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021988614.1 probable linoleate 9S-lipoxygenase 5 [Helianthus annuus]2.5e-0765.22Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGP
        GG+LE TVFP+KYAMEMSA LYKNWV  E  LPA ++KR +  E P
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGP

XP_038721219.1 probable linoleate 9S-lipoxygenase 5 isoform X1 [Tripterygium wilfordii]2.5e-0750Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP
        GG+LE TVFP+KYAMEMS+A+YKNW+  EH LPA ++KR +      C   + + +E   YP
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP

XP_038721220.1 probable linoleate 9S-lipoxygenase 5 isoform X2 [Tripterygium wilfordii]2.5e-0750Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP
        GG+LE TVFP+KYAMEMS+A+YKNW+  EH LPA ++KR +      C   + + +E   YP
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP

XP_038877032.1 probable linoleate 9S-lipoxygenase 5 isoform X1 [Benincasa hispida]1.9e-0770.45Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQE
        GGI E TVFPSKYAMEMSA LYK+WV HE  LPA +IKR +  E
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQE

XP_038877033.1 probable linoleate 9S-lipoxygenase 5 isoform X2 [Benincasa hispida]1.9e-0770.45Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQE
        GGI E TVFPSKYAMEMSA LYK+WV HE  LPA +IKR +  E
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQE

TrEMBL top hitse value%identityAlignment
A0A059B3U3 Lipoxygenase2.7e-0752.38Show/hide
Query:  EGGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP
        +GG+LE TVFP KYAMEMSA LYKNWV  E  LPA +IKR +      C   +S+   +  YP
Subjt:  EGGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP

A0A251TKU3 Lipoxygenase1.2e-0765.22Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGP
        GG+LE TVFP+KYAMEMSA LYKNWV  E  LPA ++KR +  E P
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGP

A0A2P5E6Z2 Lipoxygenase2.7e-0751.61Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP
        GG+LE  VFP KYAMEMSAA+YKNW   E +LPA +IKR +  + P C   + + +E   YP
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP

A0A5N6PQ14 Lipoxygenase1.6e-0763.04Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGP
        GG+LE+TVFP+KYAMEMSA LYKNWV  E  LPA ++KR +  + P
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGP

A0A7J7CX31 Lipoxygenase1.2e-0750Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP
        GG+LE TVFP+KYAMEMS+A+YKNW+  EH LPA ++KR +      C   + + +E   YP
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP

SwissProt top hitse value%identityAlignment
P38415 Linoleate 9S-lipoxygenase A2.4e-0859.09Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQE
        GG+LE TVFPSK+AMEMSA +YK+WV  +  LPA ++KR +  E
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQE

Q41238 Linoleate 9S-lipoxygenase 6 (Fragment)2.4e-0859.09Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQE
        GG+LE TVFPSK+AMEMSA +YK+WV  +  LPA ++KR +  E
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQE

Q43190 Probable linoleate 9S-lipoxygenase 42.4e-0859.09Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQE
        GG+LE TVFPSK+AMEMSA +YK+WV  +  LPA ++KR +  E
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQE

Q43191 Probable linoleate 9S-lipoxygenase 51.1e-0863.64Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQE
        GG+LE TVFP+KYAMEMSA +YK+WV  E  LPA +IKR +  E
Subjt:  GGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQE

Q9LUW0 Linoleate 9S-lipoxygenase 56.3e-0947.54Show/hide
Query:  GILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP
        G+LE TVFPS+YAMEMS+++YKNWV  E  LP  ++KR +  E P     + + +E   YP
Subjt:  GILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP

Arabidopsis top hitse value%identityAlignment
AT1G55020.1 lipoxygenase 11.6e-0757.45Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKN-WVSHEHTLPAVVIKRLITQEGP
        GGI E TVFPSKYAMEMS+ +YKN W   +  LPA + KR +  E P
Subjt:  GGILEETVFPSKYAMEMSAALYKN-WVSHEHTLPAVVIKRLITQEGP

AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein3.7e-0434.92Show/hide
Query:  GGILEETVFPSKYAMEMSAALYKN-WVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP
        GGI+E    P KYAME+S+A YK+ W      LPA +++R + +E      +  + + +  YP
Subjt:  GGILEETVFPSKYAMEMSAALYKN-WVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP

AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein4.5e-1047.54Show/hide
Query:  GILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP
        G+LE TVFPS+YAMEMS+++YKNWV  E  LP  ++KR +  E P     + + +E   YP
Subjt:  GILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP

AT3G45140.1 lipoxygenase 21.3e-0436.51Show/hide
Query:  GGILEETVFPSKYAMEMSAALY-KNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP
        GGI+E   +P KYA+E+S+A+Y K W   +  LPA +IKR + +E      +  + + +  YP
Subjt:  GGILEETVFPSKYAMEMSAALY-KNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTGGCATTTTGGAAGAAACAGTGTTTCCATCCAAATATGCCATGGAGATGTCAGCTGCTTTATACAAGAATTGGGTTTCTCATGAACACACACTCCCTGCAGT
TGTCATCAAGAGATTGATTACACAAGAAGGACCAATGTGTTTCACCCAAATATCAATAGCAATGGAATTATCTTCATATCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTGGCATTTTGGAAGAAACAGTGTTTCCATCCAAATATGCCATGGAGATGTCAGCTGCTTTATACAAGAATTGGGTTTCTCATGAACACACACTCCCTGCAGT
TGTCATCAAGAGATTGATTACACAAGAAGGACCAATGTGTTTCACCCAAATATCAATAGCAATGGAATTATCTTCATATCCTTAAAGAACAATGGAGCCCTGCACTTACA
ATTTTAAAGGTCAAAATAAAGAAAACTAGAATTGAAAACCAAAAGATCAAAATCGAGCAAAAATCTAGCGAAAAAGAGAAGAAAAGTACAAAACTGCCAAAAATAGGGCA
ACGCCGCGACACTTTTTCTCGAGAGCAGCCTCTGCCTTCAATATAGCAGCACTATCATGGCACCAAGGGTAGGCTTTCATGATAGACAGCACGACAACACCATCTTACAG
TGCAATGGCACTATCTTACAGTGCGACGGCGCTATTGACCAACATCGTGGCGCCAGTTTTCCATATTTGAAAATTCTATATTTTTGGGAAGAATTTTGGGTGGCCCTATA
AATTGGAGGATTTCTAGTAACCCTAGACATCAAGAAATCAGAGAAAAACACACCAAAAGAGTCACAAAGAGTGAGTTAGCTGCAAGGAAGAGAGAAGAGTTCGAGAGAGA
GTTTGGTGCCATTCAAGTTCCCGACGTGAAGACCGAAGGACATCTTGGCAGTTCCTCCTCAATCAAGGGTTTCTTCCTATTAGAGTTTTCCTTTCTTTACACTCTTTCTA
TGCTTAATTTGTTTGTGAACATGTTACTTAAAGCTATGAGTGGCTAAACTCTTTGGTTTTAGGGTATCGATG
Protein sequenceShow/hide protein sequence
MEGGILEETVFPSKYAMEMSAALYKNWVSHEHTLPAVVIKRLITQEGPMCFTQISIAMELSSYP