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Clc08G04660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G04660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionmonocopper oxidase-like protein SKS1
Genome locationClcChr08:14172534..14189508
RNA-Seq ExpressionClc08G04660
SyntenyClc08G04660
Gene Ontology termsGO:0031224 - intrinsic component of membrane (cellular component)
GO:0005507 - copper ion binding (molecular function)
InterPro domainsIPR011707 - Multicopper oxidase, N-termianl


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK00284.1 monocopper oxidase-like protein SKS1 [Cucumis melo var. makuwa]4.8e-1145.22Show/hide
Query:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVIL-----------------------SELIESIYKFLLPGIQMRHNSWQDG
        MASISLTTSL  LI I IFPS +    P  F  F + +   S    +  VI                        ++L E +     PGIQMR NSWQDG
Subjt:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVIL-----------------------SELIESIYKFLLPGIQMRHNSWQDG

Query:  LLGTNCPIPPKWNWT
        LLGTNCPIPPKWNWT
Subjt:  LLGTNCPIPPKWNWT

XP_008467211.1 PREDICTED: monocopper oxidase-like protein SKS1 [Cucumis melo]4.8e-1145.22Show/hide
Query:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVIL-----------------------SELIESIYKFLLPGIQMRHNSWQDG
        MASISLTTSL  LI I IFPS +    P  F  F + +   S    +  VI                        ++L E +     PGIQMR NSWQDG
Subjt:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVIL-----------------------SELIESIYKFLLPGIQMRHNSWQDG

Query:  LLGTNCPIPPKWNWT
        LLGTNCPIPPKWNWT
Subjt:  LLGTNCPIPPKWNWT

XP_022157495.1 monocopper oxidase-like protein SKS1 [Momordica charantia]2.1e-1145.22Show/hide
Query:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVIL-----------------------SELIESIYKFLLPGIQMRHNSWQDG
        MASISLT SLF LI I +FPS  L   P  F  F + +   S       VI                        ++L E +     PGIQMR NSWQDG
Subjt:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVIL-----------------------SELIESIYKFLLPGIQMRHNSWQDG

Query:  LLGTNCPIPPKWNWT
        LLGTNCPIPPKWNWT
Subjt:  LLGTNCPIPPKWNWT

XP_023549533.1 monocopper oxidase-like protein SKS1 [Cucurbita pepo subsp. pepo]6.2e-1142.48Show/hide
Query:  ASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHC--------------------FSSRHSSTDVILSELIESIYKFLL--PGIQMRHNSWQDGLL
        +S+SLT SLF LIS+ IFPS S    P  F  F + +                      F +  ++ +V+++   +     LL  PGIQMR NSWQDGLL
Subjt:  ASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHC--------------------FSSRHSSTDVILSELIESIYKFLL--PGIQMRHNSWQDGLL

Query:  GTNCPIPPKWNWT
        GTNCPIPP+WNWT
Subjt:  GTNCPIPPKWNWT

XP_038875739.1 monocopper oxidase-like protein SKS1 [Benincasa hispida]3.0e-1347.37Show/hide
Query:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHC--------------------FSSRHSSTDVILSELIESIYKFLL--PGIQMRHNSWQDGL
        MASISLTTSLF LISI IFPS S    P  F  F + +                      F +  ++ +V+++   +     LL  PGIQMR NSWQDGL
Subjt:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHC--------------------FSSRHSSTDVILSELIESIYKFLL--PGIQMRHNSWQDGL

Query:  LGTNCPIPPKWNWT
        LGTNCPIPPKWNWT
Subjt:  LGTNCPIPPKWNWT

TrEMBL top hitse value%identityAlignment
A0A1S3CT12 monocopper oxidase-like protein SKS12.3e-1145.22Show/hide
Query:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVIL-----------------------SELIESIYKFLLPGIQMRHNSWQDG
        MASISLTTSL  LI I IFPS +    P  F  F + +   S    +  VI                        ++L E +     PGIQMR NSWQDG
Subjt:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVIL-----------------------SELIESIYKFLLPGIQMRHNSWQDG

Query:  LLGTNCPIPPKWNWT
        LLGTNCPIPPKWNWT
Subjt:  LLGTNCPIPPKWNWT

A0A5D3BLY4 Monocopper oxidase-like protein SKS12.3e-1145.22Show/hide
Query:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVIL-----------------------SELIESIYKFLLPGIQMRHNSWQDG
        MASISLTTSL  LI I IFPS +    P  F  F + +   S    +  VI                        ++L E +     PGIQMR NSWQDG
Subjt:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVIL-----------------------SELIESIYKFLLPGIQMRHNSWQDG

Query:  LLGTNCPIPPKWNWT
        LLGTNCPIPPKWNWT
Subjt:  LLGTNCPIPPKWNWT

A0A6J1DT97 monocopper oxidase-like protein SKS11.0e-1145.22Show/hide
Query:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVIL-----------------------SELIESIYKFLLPGIQMRHNSWQDG
        MASISLT SLF LI I +FPS  L   P  F  F + +   S       VI                        ++L E +     PGIQMR NSWQDG
Subjt:  MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVIL-----------------------SELIESIYKFLLPGIQMRHNSWQDG

Query:  LLGTNCPIPPKWNWT
        LLGTNCPIPPKWNWT
Subjt:  LLGTNCPIPPKWNWT

A0A6J1ESV9 monocopper oxidase-like protein SKS13.0e-1142.48Show/hide
Query:  ASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHC--------------------FSSRHSSTDVILSELIESIYKFLL--PGIQMRHNSWQDGLL
        +S+SLT SLF LIS+ IFPS S    P  F  F + +                      F +  ++ +V+++   +     LL  PGIQMR NSWQDGLL
Subjt:  ASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHC--------------------FSSRHSSTDVILSELIESIYKFLL--PGIQMRHNSWQDGLL

Query:  GTNCPIPPKWNWT
        GTNCPIPP+WNWT
Subjt:  GTNCPIPPKWNWT

A0A6J1I442 monocopper oxidase-like protein SKS13.0e-1142.48Show/hide
Query:  ASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHC--------------------FSSRHSSTDVILSELIESIYKFLL--PGIQMRHNSWQDGLL
        +S+SLT SLF LIS+ IFPS S    P  F  F + +                      F +  ++ +V+++   +     LL  PGIQMR NSWQDGLL
Subjt:  ASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHC--------------------FSSRHSSTDVILSELIESIYKFLL--PGIQMRHNSWQDGLL

Query:  GTNCPIPPKWNWT
        GTNCPIPP+WNWT
Subjt:  GTNCPIPPKWNWT

SwissProt top hitse value%identityAlignment
Q8VXX5 Monocopper oxidase-like protein SKS14.6e-0985.71Show/hide
Query:  PGIQMRHNSWQDGLLGTNCPIPPKWNWT
        PGIQMR NSWQDG+LGTNCPIPP+WN+T
Subjt:  PGIQMRHNSWQDGLLGTNCPIPPKWNWT

Q9FHN6 Monocopper oxidase-like protein SKS21.0e-0882.14Show/hide
Query:  PGIQMRHNSWQDGLLGTNCPIPPKWNWT
        PG+QMR NSWQDG+LGTNCPIPP WN+T
Subjt:  PGIQMRHNSWQDGLLGTNCPIPPKWNWT

Q9SU40 Monocopper oxidase-like protein SKU55.1e-0885.19Show/hide
Query:  GIQMRHNSWQDGLLGTNCPIPPKWNWT
        GIQ R  SWQDG+LGTNCPIPPKWNWT
Subjt:  GIQMRHNSWQDGLLGTNCPIPPKWNWT

Arabidopsis top hitse value%identityAlignment
AT4G12420.1 Cupredoxin superfamily protein3.6e-0985.19Show/hide
Query:  GIQMRHNSWQDGLLGTNCPIPPKWNWT
        GIQ R  SWQDG+LGTNCPIPPKWNWT
Subjt:  GIQMRHNSWQDGLLGTNCPIPPKWNWT

AT4G12420.2 Cupredoxin superfamily protein3.6e-0985.19Show/hide
Query:  GIQMRHNSWQDGLLGTNCPIPPKWNWT
        GIQ R  SWQDG+LGTNCPIPPKWNWT
Subjt:  GIQMRHNSWQDGLLGTNCPIPPKWNWT

AT4G25240.1 SKU5 similar 13.3e-1085.71Show/hide
Query:  PGIQMRHNSWQDGLLGTNCPIPPKWNWT
        PGIQMR NSWQDG+LGTNCPIPP+WN+T
Subjt:  PGIQMRHNSWQDGLLGTNCPIPPKWNWT

AT5G48450.1 SKU5 similar 34.0e-0881.48Show/hide
Query:  GIQMRHNSWQDGLLGTNCPIPPKWNWT
        GIQ R NSWQDG+LGTNCPIP  WNWT
Subjt:  GIQMRHNSWQDGLLGTNCPIPPKWNWT

AT5G51480.1 SKU5 similar 27.3e-1082.14Show/hide
Query:  PGIQMRHNSWQDGLLGTNCPIPPKWNWT
        PG+QMR NSWQDG+LGTNCPIPP WN+T
Subjt:  PGIQMRHNSWQDGLLGTNCPIPPKWNWT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGATTTCTCTCACTACGTCTCTCTTCTATCTCATTTCCATTGTTATTTTCCCCAGTTGTAGCTTGCAGGCGACCCCTATGTTTTTTATGACTTTCGATCTCTT
ACATCATTGCTTCTCCTCTCGGCATTCCTCAACAGATGTGATTTTGAGTGAGTTAATCGAATCTATTTATAAATTCTTATTGCCTGGAATTCAAATGCGACATAATTCGT
GGCAGGATGGTCTTCTTGGGACCAACTGTCCTATTCCTCCAAAGTGGAATTGGACTTTACCAGTTTCAAGTGAAGGATCAAACCAACGTCCTCCACCTCTTCTAGTCTTC
CTCTCTTCAGTCTTCCCTCATTCTGTATGCAGCTATGCCCGCCAACCATGCCCAAGCCAATCTGCGATCTCACTACCAGATCTCTTCTCTCTAGTCCACGCTGCACGCCC
GCCAGTCACGCCCGAGCCGATCTGCGATCTTTTCTTTAGTTGCCTACGCTCTGGTAATGATCAATCTACCCCTATTACATTAGATGGTGATAATAAAGATGATCAACTTA
AATCCACAATCTCGCACCTCTGGAATTATTTCGATTCGATAGCCACCATCTTCAACATCACCTCTAGAACTACGATTCAGCAGCCACTGTCTTCAATAGCCCCTCCGGAA
CCACTAAACTCTAGTTCATCCGCAAAAGTTAGCATTTTGGTTCCTCTTGAAGGTTTTGTTGGAGTTCGCACTATGGGTCTTCTTTTGAGGATTGATGTGAATCAATCGAC
TTCAATCTTTAGGCCCAACTTGTATTTGTTTTCGCAAATGTTAAAACAAAGTTCATGTGCAGTATTATTACTGCTAGTAAGTCGAATGTGTATTGGATTTGTGGGATTAA
ATCTAAACTTGCTTGGTTTTATAAAGTTCATAGCCACCGAAGAGTATATGAAAGGGGAATTAGATTTTGTAGAAAAAGTAAAGAAGAATGTAGGAGATGTAGAAAAAATT
ATATCTGTTTATGAAAGAGAAGAAGTAGATAATGCTGATCTTTGCTCATCAAGTGTTTATAATGAACTTAATCAGAAAATGAAAAATGCAAAGACCCATTTGTACCTAGA
GTGTACAAAGTTCACAAAGATGTCAGCTATTATAGCATTATATAAACTAAAAGTTACTCCTAAACTAACTCCTAAATTAGTTAGTAGGAACTACAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGATTTCTCTCACTACGTCTCTCTTCTATCTCATTTCCATTGTTATTTTCCCCAGTTGTAGCTTGCAGGCGACCCCTATGTTTTTTATGACTTTCGATCTCTT
ACATCATTGCTTCTCCTCTCGGCATTCCTCAACAGATGTGATTTTGAGTGAGTTAATCGAATCTATTTATAAATTCTTATTGCCTGGAATTCAAATGCGACATAATTCGT
GGCAGGATGGTCTTCTTGGGACCAACTGTCCTATTCCTCCAAAGTGGAATTGGACTTTACCAGTTTCAAGTGAAGGATCAAACCAACGTCCTCCACCTCTTCTAGTCTTC
CTCTCTTCAGTCTTCCCTCATTCTGTATGCAGCTATGCCCGCCAACCATGCCCAAGCCAATCTGCGATCTCACTACCAGATCTCTTCTCTCTAGTCCACGCTGCACGCCC
GCCAGTCACGCCCGAGCCGATCTGCGATCTTTTCTTTAGTTGCCTACGCTCTGGTAATGATCAATCTACCCCTATTACATTAGATGGTGATAATAAAGATGATCAACTTA
AATCCACAATCTCGCACCTCTGGAATTATTTCGATTCGATAGCCACCATCTTCAACATCACCTCTAGAACTACGATTCAGCAGCCACTGTCTTCAATAGCCCCTCCGGAA
CCACTAAACTCTAGTTCATCCGCAAAAGTTAGCATTTTGGTTCCTCTTGAAGGTTTTGTTGGAGTTCGCACTATGGGTCTTCTTTTGAGGATTGATGTGAATCAATCGAC
TTCAATCTTTAGGCCCAACTTGTATTTGTTTTCGCAAATGTTAAAACAAAGTTCATGTGCAGTATTATTACTGCTAGTAAGTCGAATGTGTATTGGATTTGTGGGATTAA
ATCTAAACTTGCTTGGTTTTATAAAGTTCATAGCCACCGAAGAGTATATGAAAGGGGAATTAGATTTTGTAGAAAAAGTAAAGAAGAATGTAGGAGATGTAGAAAAAATT
ATATCTGTTTATGAAAGAGAAGAAGTAGATAATGCTGATCTTTGCTCATCAAGTGTTTATAATGAACTTAATCAGAAAATGAAAAATGCAAAGACCCATTTGTACCTAGA
GTGTACAAAGTTCACAAAGATGTCAGCTATTATAGCATTATATAAACTAAAAGTTACTCCTAAACTAACTCCTAAATTAGTTAGTAGGAACTACAAGTGA
Protein sequenceShow/hide protein sequence
MASISLTTSLFYLISIVIFPSCSLQATPMFFMTFDLLHHCFSSRHSSTDVILSELIESIYKFLLPGIQMRHNSWQDGLLGTNCPIPPKWNWTLPVSSEGSNQRPPPLLVF
LSSVFPHSVCSYARQPCPSQSAISLPDLFSLVHAARPPVTPEPICDLFFSCLRSGNDQSTPITLDGDNKDDQLKSTISHLWNYFDSIATIFNITSRTTIQQPLSSIAPPE
PLNSSSSAKVSILVPLEGFVGVRTMGLLLRIDVNQSTSIFRPNLYLFSQMLKQSSCAVLLLLVSRMCIGFVGLNLNLLGFIKFIATEEYMKGELDFVEKVKKNVGDVEKI
ISVYEREEVDNADLCSSSVYNELNQKMKNAKTHLYLECTKFTKMSAIIALYKLKVTPKLTPKLVSRNYK