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Clc08G05090 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G05090
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMuDRA-like transposase
Genome locationClcChr08:15705708..15712781
RNA-Seq ExpressionClc08G05090
SyntenyClc08G05090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038882374.1 uncharacterized protein LOC120073641 [Benincasa hispida]4.4e-2261.8Show/hide
Query:  GTPEDSYHQASAFVIRQLIKDKF-GVGRVDKPHHIIEDIRQEYGVNISYDKAWCAREITFAIARGTPEDSYVVLHAYGETLKIQNPRTK
        G     + Q +  V+ +LIKDKF  +GRV KP HIIED+R+EYGVNISYDKAW ARE T+A+ RGT E+SY VLHAYGE LK++NP T+
Subjt:  GTPEDSYHQASAFVIRQLIKDKF-GVGRVDKPHHIIEDIRQEYGVNISYDKAWCAREITFAIARGTPEDSYVVLHAYGETLKIQNPRTK

XP_038888366.1 uncharacterized protein LOC120078210 [Benincasa hispida]2.9e-2159.55Show/hide
Query:  GTPEDSYHQASAFVIRQLIKDKF-GVGRVDKPHHIIEDIRQEYGVNISYDKAWCAREITFAIARGTPEDSYVVLHAYGETLKIQNPRTK
        G     + QA+  V+ +LIKDKF G+GRV KP HIIED+++EYGVNISYDKAW ARE  +A+ARGTPE+S +VLH YGE L ++N  T+
Subjt:  GTPEDSYHQASAFVIRQLIKDKF-GVGRVDKPHHIIEDIRQEYGVNISYDKAWCAREITFAIARGTPEDSYVVLHAYGETLKIQNPRTK

XP_038891670.1 uncharacterized protein LOC120081063 [Benincasa hispida]4.3e-2567.44Show/hide
Query:  GTPEDSYHQASAFVIRQLIKDKF-GVGRVDKPHHIIEDIRQEYGVNISYDKAWCAREITFAIARGTPEDSYVVLHAYGETLKIQNP
        G     + QA+  V+ +LIKDKF G+GRV KP HIIED+R+EYGVNISY+KAWCARE T+A+ARGTPE+SY VLHAYGE LK++NP
Subjt:  GTPEDSYHQASAFVIRQLIKDKF-GVGRVDKPHHIIEDIRQEYGVNISYDKAWCAREITFAIARGTPEDSYVVLHAYGETLKIQNP

XP_038896520.1 uncharacterized protein LOC120084770 [Benincasa hispida]4.4e-2258.43Show/hide
Query:  GTPEDSYHQASAFVIRQLIKDKF-GVGRVDKPHHIIEDIRQEYGVNISYDKAWCAREITFAIARGTPEDSYVVLHAYGETLKIQNPRTK
        G     + QA+  ++ +LIKDKF G+ RV KPHHI+E +R+EY +NISYDK W  RE  +A+ARGTPE+SY VLHAYGETLK++NP T+
Subjt:  GTPEDSYHQASAFVIRQLIKDKF-GVGRVDKPHHIIEDIRQEYGVNISYDKAWCAREITFAIARGTPEDSYVVLHAYGETLKIQNPRTK

XP_038902336.1 uncharacterized protein LOC120088970 [Benincasa hispida]2.1e-2461.8Show/hide
Query:  GTPEDSYHQASAFVIRQLIKDKF-GVGRVDKPHHIIEDIRQEYGVNISYDKAWCAREITFAIARGTPEDSYVVLHAYGETLKIQNPRTK
        G     + QA+  V+ +LIKDKF G+GRV KP HI+ED+++EYG+NISYDK W ARE T+A+ARGTPE+SY VLHAYG+TLK++NP T+
Subjt:  GTPEDSYHQASAFVIRQLIKDKF-GVGRVDKPHHIIEDIRQEYGVNISYDKAWCAREITFAIARGTPEDSYVVLHAYGETLKIQNPRTK

TrEMBL top hitse value%identityAlignment
A0A5A7UG00 MuDRA-like transposase1.4e-1838.51Show/hide
Query:  TSDEDVEIGQIFFCKNDVKMRLSMLAIKKNFEMRKRSKNNPSTREEAAARTKVETHASRPCAEKKKQIQMPGEIAFAIARGT---------LEDSYCQTS
        ++ E++++GQIFFCK D+ MRLS+LA+KKNF+   +     ST+E    R          C  + + +++     F I +           L   + Q  
Subjt:  TSDEDVEIGQIFFCKNDVKMRLSMLAIKKNFEMRKRSKNNPSTREEAAARTKVETHASRPCAEKKKQIQMPGEIAFAIARGT---------LEDSYCQTS

Query:  AFVIRQLIKDKFK-VGRVDKPCHIIEDIRQEYGVNISYDKAQRARKIAFAIARGTPEDSYH
        ++V+ +LIK KFK  GR+ KP  IIED+RQ+YG+N+SY+KA RAR+ A+   RG+PE+SY+
Subjt:  AFVIRQLIKDKFK-VGRVDKPCHIIEDIRQEYGVNISYDKAQRARKIAFAIARGTPEDSYH

A0A5D3BSX9 MuDRA-like transposase1.4e-1838.51Show/hide
Query:  TSDEDVEIGQIFFCKNDVKMRLSMLAIKKNFEMRKRSKNNPSTREEAAARTKVETHASRPCAEKKKQIQMPGEIAFAIARGT---------LEDSYCQTS
        ++ E++++GQIFFCK D+ MRLS+LA+KKNF+   +     ST+E    R          C  + + +++     F I +           L   + Q  
Subjt:  TSDEDVEIGQIFFCKNDVKMRLSMLAIKKNFEMRKRSKNNPSTREEAAARTKVETHASRPCAEKKKQIQMPGEIAFAIARGT---------LEDSYCQTS

Query:  AFVIRQLIKDKFK-VGRVDKPCHIIEDIRQEYGVNISYDKAQRARKIAFAIARGTPEDSYH
        ++V+ +LIK KFK  GR+ KP  IIED+RQ+YG+N+SY+KA RAR+ A+   RG+PE+SY+
Subjt:  AFVIRQLIKDKFK-VGRVDKPCHIIEDIRQEYGVNISYDKAQRARKIAFAIARGTPEDSYH

A0A5D3CLG9 MuDRA-like transposase1.4e-1838.51Show/hide
Query:  TSDEDVEIGQIFFCKNDVKMRLSMLAIKKNFEMRKRSKNNPSTREEAAARTKVETHASRPCAEKKKQIQMPGEIAFAIARGT---------LEDSYCQTS
        ++ E++++GQIFFCK D+ MRLS+LA+KKNF+   +     ST+E    R          C  + + +++     F I +           L   + Q  
Subjt:  TSDEDVEIGQIFFCKNDVKMRLSMLAIKKNFEMRKRSKNNPSTREEAAARTKVETHASRPCAEKKKQIQMPGEIAFAIARGT---------LEDSYCQTS

Query:  AFVIRQLIKDKFK-VGRVDKPCHIIEDIRQEYGVNISYDKAQRARKIAFAIARGTPEDSYH
        ++V+ +LIK KFK  GR+ KP  IIED+RQ+YG+N+SY+KA RAR+ A+   RG+PE+SY+
Subjt:  AFVIRQLIKDKFK-VGRVDKPCHIIEDIRQEYGVNISYDKAQRARKIAFAIARGTPEDSYH

A0A5D3CSG7 MuDRA-like transposase1.4e-1838.51Show/hide
Query:  TSDEDVEIGQIFFCKNDVKMRLSMLAIKKNFEMRKRSKNNPSTREEAAARTKVETHASRPCAEKKKQIQMPGEIAFAIARGT---------LEDSYCQTS
        ++ E++++GQIFFCK D+ MRLS+LA+KKNF+   +     ST+E    R          C  + + +++     F I +           L   + Q  
Subjt:  TSDEDVEIGQIFFCKNDVKMRLSMLAIKKNFEMRKRSKNNPSTREEAAARTKVETHASRPCAEKKKQIQMPGEIAFAIARGT---------LEDSYCQTS

Query:  AFVIRQLIKDKFK-VGRVDKPCHIIEDIRQEYGVNISYDKAQRARKIAFAIARGTPEDSYH
        ++V+ +LIK KFK  GR+ KP  IIED+RQ+YG+N+SY+KA RAR+ A+   RG+PE+SY+
Subjt:  AFVIRQLIKDKFK-VGRVDKPCHIIEDIRQEYGVNISYDKAQRARKIAFAIARGTPEDSYH

Q5GIT1 MuDRA transposase-like1.4e-1838.51Show/hide
Query:  TSDEDVEIGQIFFCKNDVKMRLSMLAIKKNFEMRKRSKNNPSTREEAAARTKVETHASRPCAEKKKQIQMPGEIAFAIARGT---------LEDSYCQTS
        ++ E++++GQIFFCK D+ MRLS+LA+KKNF+   +     ST+E    R          C  + + +++     F I +           L   + Q  
Subjt:  TSDEDVEIGQIFFCKNDVKMRLSMLAIKKNFEMRKRSKNNPSTREEAAARTKVETHASRPCAEKKKQIQMPGEIAFAIARGT---------LEDSYCQTS

Query:  AFVIRQLIKDKFK-VGRVDKPCHIIEDIRQEYGVNISYDKAQRARKIAFAIARGTPEDSYH
        ++V+ +LIK KFK  GR+ KP  IIED+RQ+YG+N+SY+KA RAR+ A+   RG+PE+SY+
Subjt:  AFVIRQLIKDKFK-VGRVDKPCHIIEDIRQEYGVNISYDKAQRARKIAFAIARGTPEDSYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTAGTGCCAACGTCAGATGAGGATGTTGAGATTGGTCAGATATTTTTTTGTAAGAACGACGTGAAGATGAGATTATCCATGTTAGCCATCAAGAAGAAT
TTTGAGATGCGGAAAAGAAGCAAAAATAATCCAAGTACTAGAGAGGAAGCTGCTGCGAGAACAAAAGTGGAAACCCATGCGTCGAGACCATGCGCTGAGAAGAAA
AAGCAGATACAGATGCCTGGGGAAATCGCTTTTGCTATTGCAAGGGGAACCCTCGAGGATTCATACTGCCAAACAAGTGCATTTGTAATTAGGCAACTCATTAAG
GACAAGTTCAAAGTTGGTCGAGTTGATAAACCGTGCCATATTATCGAGGATATACGACAAGAGTATGGTGTGAATATCAGCTATGACAAGGCACAGCGTGCCAGG
AAAATCGCTTTTGCTATTGCAAGGGGAACCCCCGAGGATTCATACCACCAAGCAAGTGCATTTGTAATTAGGCAACTCATTAAGGACAAGTTTGGAGTTGGCCGA
TTTGATAAACCGCGCCATATTATTGAGGATATGCGACAAGGGTATGGTGTGAATATCAGCTATGACAAGGCATGTCGTGGCAGGGAAATCGCTTTTGCTATTGCA
AGGGGAACCCCCGAGGATTCATACTGCCAAGCAAGTGCATTTGCATGGCGTGCCAGGGAAATCACTTTTGTTATTGCAAGGGGAACCCCCGAGGATTCATACCAC
CAAGCAAGTGCATTTGTAATTAGGCAACTCATTAAGGACAAGTTTGGAGTTGGCCGAGTTGATAAACCGCACCATATTATCGAGGATATACGACAAGAGTATGGT
GTAAATATCAGCTATGACAAGGCATGGTGTGCCAGAGAAATCACTTTTGCTATTGCAAGGGGAACCCCTGAGGATTCATACGTTGTATTGCATGCATATGGAGAA
ACATTGAAGATACAAAATCCTAGGACCAAGGGCATCGCATCCTCAAGGGGCATCTCACGCTCTACATGGTCCTCGTCATGTGTATGGATCAGCTTCTTGAGAGGC
ACTTCACCTTCTAAGCTTCTTGAGCTTCTGATGCTGAAGGTATCATCTCCTTGTCTTGGGTCTCCACGTATACGGTGCACTTCCATTGCCATTAAATTATTGAAG
TACTTGATTCATAGTGATACAGTCACATCAACACTACGAACCAGGGACAAATTGGTACTTTCACACATGATTGATGCAAGCAGAAGGCCAAATTTAAGCTTCCAC
CTTCGGGTGCTTGTTGTTGCCAAGCATTTGAGTCACACTACAAGAAATCGGCCTTTTGCCGACGCCAAAAAGTGTGGCGTGTTGATTGGAACTATCGACGCCTGT
CGTGAAGCCAAACCTTCGTTGACGTTAGCAAAACGCGACGGCAAACGTTTGGTACGCCAACGATTAGATGAGGCATCGACAGTTCTTGCATGCCGACTATATGCA
GACGACGTCGACATATCTCCACAATGCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATTAGTGCCAACGTCAGATGAGGATGTTGAGATTGGTCAGATATTTTTTTGTAAGAACGACGTGAAGATGAGATTATCCATGTTAGCCATCAAGAAGAAT
TTTGAGATGCGGAAAAGAAGCAAAAATAATCCAAGTACTAGAGAGGAAGCTGCTGCGAGAACAAAAGTGGAAACCCATGCGTCGAGACCATGCGCTGAGAAGAAA
AAGCAGATACAGATGCCTGGGGAAATCGCTTTTGCTATTGCAAGGGGAACCCTCGAGGATTCATACTGCCAAACAAGTGCATTTGTAATTAGGCAACTCATTAAG
GACAAGTTCAAAGTTGGTCGAGTTGATAAACCGTGCCATATTATCGAGGATATACGACAAGAGTATGGTGTGAATATCAGCTATGACAAGGCACAGCGTGCCAGG
AAAATCGCTTTTGCTATTGCAAGGGGAACCCCCGAGGATTCATACCACCAAGCAAGTGCATTTGTAATTAGGCAACTCATTAAGGACAAGTTTGGAGTTGGCCGA
TTTGATAAACCGCGCCATATTATTGAGGATATGCGACAAGGGTATGGTGTGAATATCAGCTATGACAAGGCATGTCGTGGCAGGGAAATCGCTTTTGCTATTGCA
AGGGGAACCCCCGAGGATTCATACTGCCAAGCAAGTGCATTTGCATGGCGTGCCAGGGAAATCACTTTTGTTATTGCAAGGGGAACCCCCGAGGATTCATACCAC
CAAGCAAGTGCATTTGTAATTAGGCAACTCATTAAGGACAAGTTTGGAGTTGGCCGAGTTGATAAACCGCACCATATTATCGAGGATATACGACAAGAGTATGGT
GTAAATATCAGCTATGACAAGGCATGGTGTGCCAGAGAAATCACTTTTGCTATTGCAAGGGGAACCCCTGAGGATTCATACGTTGTATTGCATGCATATGGAGAA
ACATTGAAGATACAAAATCCTAGGACCAAGGGCATCGCATCCTCAAGGGGCATCTCACGCTCTACATGGTCCTCGTCATGTGTATGGATCAGCTTCTTGAGAGGC
ACTTCACCTTCTAAGCTTCTTGAGCTTCTGATGCTGAAGGTATCATCTCCTTGTCTTGGGTCTCCACGTATACGGTGCACTTCCATTGCCATTAAATTATTGAAG
TACTTGATTCATAGTGATACAGTCACATCAACACTACGAACCAGGGACAAATTGGTACTTTCACACATGATTGATGCAAGCAGAAGGCCAAATTTAAGCTTCCAC
CTTCGGGTGCTTGTTGTTGCCAAGCATTTGAGTCACACTACAAGAAATCGGCCTTTTGCCGACGCCAAAAAGTGTGGCGTGTTGATTGGAACTATCGACGCCTGT
CGTGAAGCCAAACCTTCGTTGACGTTAGCAAAACGCGACGGCAAACGTTTGGTACGCCAACGATTAGATGAGGCATCGACAGTTCTTGCATGCCGACTATATGCA
GACGACGTCGACATATCTCCACAATGCCGATGA
Protein sequenceShow/hide protein sequence
MQLVPTSDEDVEIGQIFFCKNDVKMRLSMLAIKKNFEMRKRSKNNPSTREEAAARTKVETHASRPCAEKKKQIQMPGEIAFAIARGTLEDSYCQTSAFVIRQLIK
DKFKVGRVDKPCHIIEDIRQEYGVNISYDKAQRARKIAFAIARGTPEDSYHQASAFVIRQLIKDKFGVGRFDKPRHIIEDMRQGYGVNISYDKACRGREIAFAIA
RGTPEDSYCQASAFAWRAREITFVIARGTPEDSYHQASAFVIRQLIKDKFGVGRVDKPHHIIEDIRQEYGVNISYDKAWCAREITFAIARGTPEDSYVVLHAYGE
TLKIQNPRTKGIASSRGISRSTWSSSCVWISFLRGTSPSKLLELLMLKVSSPCLGSPRIRCTSIAIKLLKYLIHSDTVTSTLRTRDKLVLSHMIDASRRPNLSFH
LRVLVVAKHLSHTTRNRPFADAKKCGVLIGTIDACREAKPSLTLAKRDGKRLVRQRLDEASTVLACRLYADDVDISPQCR