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Clc08G05610 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G05610
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCysteine-rich RLK (Receptor-like protein kinase) 8
Genome locationClcChr08:16846843..16848769
RNA-Seq ExpressionClc08G05610
SyntenyClc08G05610
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068025.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]2.0e-1855.29Show/hide
Query:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        ++Q +   E  FYH+A    +W + +  EL+AME +QTW IVPLP  ++SIGC  VYK++HK DGS+E YK RLVAKGYT QEGL
Subjt:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

TYK16758.1 Copia protein [Cucumis melo var. makuwa]4.1e-1956.47Show/hide
Query:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        ++Q +   E  FYH+A    +W + +  EL+AME +QTW IVPLP  ++SIGC  VYK++HKVDGS+E YK RLVAKGYT QEGL
Subjt:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

TYK18103.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]2.0e-1855.29Show/hide
Query:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        ++Q +   E  FYH+A    +W + +  EL+AME +QTW IVPLP  ++SIGC  VYK++HK DGS+E YK RLVAKGYT QEGL
Subjt:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

WP_217833333.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]7.5e-29100Show/hide
Query:  HQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        HQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
Subjt:  HQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

XP_022154919.1 uncharacterized protein LOC111022065 [Momordica charantia]8.3e-2055.29Show/hide
Query:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        ++  +  +EP+FYHQA     W + +  EL AME + TW +VPLP+  HSIGC  +YKV+HK DGS+E YK RLVAKGYT QEGL
Subjt:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

TrEMBL top hitse value%identityAlignment
A0A5A7VQN7 Cysteine-rich RLK (Receptor-like protein kinase) 89.9e-1955.29Show/hide
Query:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        ++Q +   E  FYH+A    +W + +  EL+AME +QTW IVPLP  ++SIGC  VYK++HK DGS+E YK RLVAKGYT QEGL
Subjt:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

A0A5D3CZP1 Copia protein2.0e-1956.47Show/hide
Query:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        ++Q +   E  FYH+A    +W + +  EL+AME +QTW IVPLP  ++SIGC  VYK++HKVDGS+E YK RLVAKGYT QEGL
Subjt:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

A0A5D3D1N3 Cysteine-rich RLK (Receptor-like protein kinase) 89.9e-1955.29Show/hide
Query:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        ++Q +   E  FYH+A    +W + +  EL+AME +QTW IVPLP  ++SIGC  VYK++HK DGS+E YK RLVAKGYT QEGL
Subjt:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

A0A6J1DIP8 uncharacterized protein LOC1110203996.4e-1853.75Show/hide
Query:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYT
        ++  +AT+EP+FYHQA S   W   + +EL+AME + TW +VPL   QHSIGC  VYK+++K DG+++ YK RLVAKGYT
Subjt:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYT

A0A6J1DNP7 uncharacterized protein LOC1110220654.0e-2055.29Show/hide
Query:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        ++  +  +EP+FYHQA     W + +  EL AME + TW +VPLP+  HSIGC  +YKV+HK DGS+E YK RLVAKGYT QEGL
Subjt:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

SwissProt top hitse value%identityAlignment
P04146 Copia protein8.6e-0433.9Show/hide
Query:  WHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYT
        W + +  EL A + + TW I   P N++ +    V+ V++   G+   YK RLVA+G+T
Subjt:  WHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYT

P92520 Uncharacterized mitochondrial protein AtMg008202.8e-1040.26Show/hide
Query:  EPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        EP+    A  D  W Q +  EL A+  ++TW +VP P NQ+ +GC  V+K +   DG+++  K RLVAKG+  +EG+
Subjt:  EPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.1e-0932.19Show/hide
Query:  SALSNANHIIRTSVAVH----LAQSKISNTDASAGS----SRTNHVAIQPPSALTTAMLVMIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWF
        SA S++      S+ +H    LAQ   +N  A   +    +R     I+P    + A    +  AA  EPR   QA  D +W   + +E+ A   + TW 
Subjt:  SALSNANHIIRTSVAVH----LAQSKISNTDASAGS----SRTNHVAIQPPSALTTAMLVMIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWF

Query:  IVPLPHNQHSI-GCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        +VP P +  +I GC  ++  ++  DGS+  YK RLVAKGY  + GL
Subjt:  IVPLPHNQHSI-GCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.4e-0941.46Show/hide
Query:  AATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSI-GCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        AA  EPR   QA  D +W Q + +E+ A   + TW +VP P    +I GC  ++  +   DGS+  YK RLVAKGY  + GL
Subjt:  AATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSI-GCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.7e-1644.71Show/hide
Query:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        ++  A   EP  Y++A   + W   + +E+ AME + TW I  LP N+  IGC  VYK+++  DG++E YK RLVAKGYT QEG+
Subjt:  MIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.0e-1140.26Show/hide
Query:  EPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL
        EP+    A  D  W Q +  EL A+  ++TW +VP P NQ+ +GC  V+K +   DG+++  K RLVAKG+  +EG+
Subjt:  EPRFYHQAASDVQWHQVVANELKAMEDSQTWFIVPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTTCTACTCCAAAATCTGTCTTTGCTGAAGATTCTTTGGCTTCTCTCAGCCTTGAGTAATGCCAATCATATTATAAGAACGTCTGTTGCAGTTCATCTTGCACA
ATCTAAGATCTCTAATACTGACGCTTCTGCTGGATCTTCTAGAACTAATCATGTAGCAATTCAGCCTCCTAGTGCTCTTACCACTGCTATGCTTGTTATGATTCAGTTTG
CTGCTACTTTTGAACCTCGGTTTTATCATCAGGCTGCTTCTGATGTCCAATGGCATCAAGTTGTAGCAAATGAGTTAAAAGCCATGGAAGATAGTCAGACTTGGTTTATT
GTTCCTTTGCCCCATAATCAACATTCCATAGGTTGTACACGGGTCTACAAAGTGGAACATAAAGTTGATGGTAGTGTTGAGTGTTACAAAGTACGTCTAGTGGCTAAGGG
TTACACTTATCAAGAGGGATTATGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTTCTACTCCAAAATCTGTCTTTGCTGAAGATTCTTTGGCTTCTCTCAGCCTTGAGTAATGCCAATCATATTATAAGAACGTCTGTTGCAGTTCATCTTGCACA
ATCTAAGATCTCTAATACTGACGCTTCTGCTGGATCTTCTAGAACTAATCATGTAGCAATTCAGCCTCCTAGTGCTCTTACCACTGCTATGCTTGTTATGATTCAGTTTG
CTGCTACTTTTGAACCTCGGTTTTATCATCAGGCTGCTTCTGATGTCCAATGGCATCAAGTTGTAGCAAATGAGTTAAAAGCCATGGAAGATAGTCAGACTTGGTTTATT
GTTCCTTTGCCCCATAATCAACATTCCATAGGTTGTACACGGGTCTACAAAGTGGAACATAAAGTTGATGGTAGTGTTGAGTGTTACAAAGTACGTCTAGTGGCTAAGGG
TTACACTTATCAAGAGGGATTATGTTGA
Protein sequenceShow/hide protein sequence
MVLLLQNLSLLKILWLLSALSNANHIIRTSVAVHLAQSKISNTDASAGSSRTNHVAIQPPSALTTAMLVMIQFAATFEPRFYHQAASDVQWHQVVANELKAMEDSQTWFI
VPLPHNQHSIGCTRVYKVEHKVDGSVECYKVRLVAKGYTYQEGLC