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Clc08G05930 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G05930
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:17243869..17244546
RNA-Seq ExpressionClc08G05930
SyntenyClc08G05930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578935.1 hypothetical protein SDJN03_23383, partial [Cucurbita argyrosperma subsp. sororia]4.8e-1352.69Show/hide
Query:  DGSQQQMLSYFYKTSTQTCLFVIKSPTSNKFSDILMALNTAPLNKSIQFPATAIEISKPPKVATVIPARRKLVKTMMYHSVKDFLKSLFFPSP
        + S++ +L  F  T+  +   +    +S K S I MA  TAP NK I+FPATA+   KP KVATVIPARRKLV TMMY+S++DFLKSL   SP
Subjt:  DGSQQQMLSYFYKTSTQTCLFVIKSPTSNKFSDILMALNTAPLNKSIQFPATAIEISKPPKVATVIPARRKLVKTMMYHSVKDFLKSLFFPSP
KAG6602134.1 hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]2.4e-0474.29Show/hide
Query:  KVATVIPARRKLVKTMMYHSVKDFLKSLFFPSPET
        KV +VIP +RKLVKTMMYH +KDFLKSLF P P+T
Subjt:  KVATVIPARRKLVKTMMYHSVKDFLKSLFFPSPET
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATTCTAAATAAATGGAATGGAGGGTTTAGAGTATTGATTTACCTTACCAAAGCTTCGAAGCTTCTTAGAAACCTTAACCCCGACACTGATGGTTCCCAACAACA
AATGCTTTCATACTTCTATAAAACTTCAACTCAGACTTGCTTATTTGTAATCAAATCTCCAACCTCAAACAAATTCAGTGACATTCTGATGGCTCTAAATACTGCCCCAC
TTAACAAGTCCATCCAATTTCCGGCCACCGCCATCGAAATTTCGAAACCGCCGAAGGTTGCCACTGTAATTCCGGCGAGAAGAAAGTTGGTGAAGACGATGATGTATCAC
TCTGTAAAGGACTTTCTCAAATCCCTGTTTTTTCCTTCGCCGGAAACCCAACACCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATTCTAAATAAATGGAATGGAGGGTTTAGAGTATTGATTTACCTTACCAAAGCTTCGAAGCTTCTTAGAAACCTTAACCCCGACACTGATGGTTCCCAACAACA
AATGCTTTCATACTTCTATAAAACTTCAACTCAGACTTGCTTATTTGTAATCAAATCTCCAACCTCAAACAAATTCAGTGACATTCTGATGGCTCTAAATACTGCCCCAC
TTAACAAGTCCATCCAATTTCCGGCCACCGCCATCGAAATTTCGAAACCGCCGAAGGTTGCCACTGTAATTCCGGCGAGAAGAAAGTTGGTGAAGACGATGATGTATCAC
TCTGTAAAGGACTTTCTCAAATCCCTGTTTTTTCCTTCGCCGGAAACCCAACACCCATGACTCGTAATTATGTTAATCTCATCACTTATTTGTATTAAGGTTTTTATCTT
CTTCTTCCTTTTTTGGTGGATAGGTCTTCCTCTGTTTCATTGTACAAAGAAAACAGAGCATTTTGTGTTTTGGCTTGTTCTTGACAAATTACAAATGTATAATTAAATAA
AGTTGTGATTTGTTCTTATTTTAGTGTCATGTGCGAAATTCTGATGGGTATTTGTTGAATCAAAGAGTAGGAGATTGGGGTAATTCAACCAAATTAAAAACAGAGACTTC
ATTTCTTTTCGGGAAAAA
Protein sequenceShow/hide protein sequence
MSILNKWNGGFRVLIYLTKASKLLRNLNPDTDGSQQQMLSYFYKTSTQTCLFVIKSPTSNKFSDILMALNTAPLNKSIQFPATAIEISKPPKVATVIPARRKLVKTMMYH
SVKDFLKSLFFPSPETQHP