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Clc08G05940 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G05940
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:17277998..17278243
RNA-Seq ExpressionClc08G05940
SyntenyClc08G05940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141661.1 uncharacterized protein LOC111011963 [Momordica charantia]6.5e-0860.34Show/hide
Query:  VADGADLAPNNPVNSDTAPVT---AIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLL
        +ADG +LAPNNPV      VT   AIG R GG  KSVIPKRR+LVKTMIY+ IK++++
Subjt:  VADGADLAPNNPVNSDTAPVT---AIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLL
TrEMBL top hitse value%identityAlignment
A0A5D3D590 Uncharacterized protein8.0e-0458.33Show/hide
Query:  NNPV---NSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWL
        NNPV    + TA   AI YRG GN KSVIPK+R LVK M+Y  IK W+
Subjt:  NNPV---NSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWL
A0A6J1CJW3 uncharacterized protein LOC1110119633.1e-0860.34Show/hide
Query:  VADGADLAPNNPVNSDTAPVT---AIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLL
        +ADG +LAPNNPV      VT   AIG R GG  KSVIPKRR+LVKTMIY+ IK++++
Subjt:  VADGADLAPNNPVNSDTAPVT---AIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCCACACTCTTTTCCGGCAACCCCATCGTCGTCGTCGCTGACGGTGCCGATCTTGCTCCAAACAATCCGGTGAATTCAGACACAGCTCCGGTGACGGCGATTGG
GTACAGAGGCGGTGGAAATACGAAATCTGTGATACCCAAGAGGAGGGTGTTAGTGAAGACGATGATTTACCATTCTATTAAAAACTGGCTCCTATTCCCTCTTTCGTCCC
ACGCCGTAGCTTCACAACAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATCCACACTCTTTTCCGGCAACCCCATCGTCGTCGTCGCTGACGGTGCCGATCTTGCTCCAAACAATCCGGTGAATTCAGACACAGCTCCGGTGACGGCGATTGG
GTACAGAGGCGGTGGAAATACGAAATCTGTGATACCCAAGAGGAGGGTGTTAGTGAAGACGATGATTTACCATTCTATTAAAAACTGGCTCCTATTCCCTCTTTCGTCCC
ACGCCGTAGCTTCACAACAATTTTAA
Protein sequenceShow/hide protein sequence
MQSTLFSGNPIVVVADGADLAPNNPVNSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLFPLSSHAVASQQF