; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G05970 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G05970
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:17337512..17338274
RNA-Seq ExpressionClc08G05970
SyntenyClc08G05970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647204.1 hypothetical protein Csa_019006, partial [Cucumis sativus]2.9e-1365.71Show/hide
Query:  MDVVEPAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPPSAGAGTGALP
        +D+VE  VAEASN AVQM +GY+ G  KM  VIPK+RKLVKTMMYHSIK F+IS FR   S   GTGA P
Subjt:  MDVVEPAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPPSAGAGTGALP

KAG6578934.1 hypothetical protein SDJN03_23382, partial [Cucurbita argyrosperma subsp. sororia]7.9e-1148.48Show/hide
Query:  ISTAGDVPEVKRKKFPVNLSAGSELGVRVRPRGELMDVVEPAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPPSAGA
        I TA  +P V  +KFP ++ AGS+  + VRP GE      PA AE +NR VQ            + VIPKKR+LVKTMMYH++K+F+ S+FR  PSAGA
Subjt:  ISTAGDVPEVKRKKFPVNLSAGSELGVRVRPRGELMDVVEPAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPPSAGA

KAG6578935.1 hypothetical protein SDJN03_23383, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1146.49Show/hide
Query:  LKIQQIADKI-SPIPISTAGDVPEVKRKKFPVNLSAGSELGVRVRPRGELMDVVEPAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKD
        +K + I +KI   IP +    +P V  KKFP  + AGS+  + VRP  E      PAVAE +NR VQ            + VIPKKR+LVKTMMYHS+K+
Subjt:  LKIQQIADKI-SPIPISTAGDVPEVKRKKFPVNLSAGSELGVRVRPRGELMDVVEPAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKD

Query:  FVISLFRTPPSAGA
        F+ S+FR  PSAGA
Subjt:  FVISLFRTPPSAGA

KAG6602131.1 hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]1.8e-0760Show/hide
Query:  PAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPP
        PA  E +  +   ++GYR G GK++ VIPKKRKLVKTMMYH IK+F+ SLFR PP
Subjt:  PAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPP

KGN47677.1 hypothetical protein Csa_018325 [Cucumis sativus]1.7e-2162.24Show/hide
Query:  DVPEVKRKKFPVNLSAGSELGVRVRPRGELMDVVEPAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPPSAGAGTGA
        DVP V  ++FP+NL  GSELG+RVRP GE M VVE    EAS+R VQMA+GY+ GG KM+ VIP KRKLVK MMY SIK+FVIS F   PS G+   A
Subjt:  DVPEVKRKKFPVNLSAGSELGVRVRPRGELMDVVEPAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPPSAGAGTGA

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ7 Uncharacterized protein1.8e-0577.14Show/hide
Query:  RVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFR
        RVGG K++ VIPK+RKLVKTM+YHS+KDF+ISLFR
Subjt:  RVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFR

A0A0A0KH01 Uncharacterized protein8.3e-2262.24Show/hide
Query:  DVPEVKRKKFPVNLSAGSELGVRVRPRGELMDVVEPAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPPSAGAGTGA
        DVP V  ++FP+NL  GSELG+RVRP GE M VVE    EAS+R VQMA+GY+ GG KM+ VIP KRKLVK MMY SIK+FVIS F   PS G+   A
Subjt:  DVPEVKRKKFPVNLSAGSELGVRVRPRGELMDVVEPAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPPSAGAGTGA

A0A5D3D590 Uncharacterized protein3.2e-0556.36Show/hide
Query:  PAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPP
        P V E +  A++ AI YR G G M+ VIPKKRKLVK MMY  IK+++ SLFR  P
Subjt:  PAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPP

A0A6J1CJW3 uncharacterized protein LOC1110119636.4e-0670.45Show/hide
Query:  AIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPPSA
        AIG R  GGK++ VIPK+R LVKTM+Y+ IKDF+ISLFR PPSA
Subjt:  AIGYRVGGGKMRFVIPKKRKLVKTMMYHSIKDFVISLFRTPPSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCCAGAGTCTCGCCGGAAGACAATCGTGTTCCTCTGCTTCTTAAAATCCAACAAATCGCTGACAAAATTTCCCCGATTCCGATTTCGACCGCTGGGGACGTGCC
GGAGGTGAAACGTAAAAAGTTTCCGGTGAACTTATCGGCCGGATCGGAACTGGGGGTGAGGGTGAGGCCCAGAGGAGAGTTGATGGACGTGGTGGAGCCGGCGGTGGCGG
AAGCGTCGAACCGGGCGGTTCAAATGGCGATTGGATACAGAGTCGGCGGTGGAAAAATGAGATTTGTGATTCCGAAGAAGAGGAAGTTAGTTAAGACAATGATGTATCAC
TCCATAAAGGATTTTGTTATATCACTCTTTCGTACGCCGCCATCCGCCGGCGCCGGTACCGGAGCTCTACCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACCACTGATTTCCTATAAGAACACAACCGAAATGTTCTGTGAAACAAACTGAAAACCTCTTCAATTACCCAAAAAATGGGATCCAGAGTCTCGCCGGAAGACAAT
CGTGTTCCTCTGCTTCTTAAAATCCAACAAATCGCTGACAAAATTTCCCCGATTCCGATTTCGACCGCTGGGGACGTGCCGGAGGTGAAACGTAAAAAGTTTCCGGTGAA
CTTATCGGCCGGATCGGAACTGGGGGTGAGGGTGAGGCCCAGAGGAGAGTTGATGGACGTGGTGGAGCCGGCGGTGGCGGAAGCGTCGAACCGGGCGGTTCAAATGGCGA
TTGGATACAGAGTCGGCGGTGGAAAAATGAGATTTGTGATTCCGAAGAAGAGGAAGTTAGTTAAGACAATGATGTATCACTCCATAAAGGATTTTGTTATATCACTCTTT
CGTACGCCGCCATCCGCCGGCGCCGGTACCGGAGCTCTACCGTAAACCCAATTTGCCAAGATTTATATTAATATTCAGTTCAGATGTCGTTATTACTGTTTAAGGTTTTC
ATGTTTTTTCTTTTTTTGAGGTTTGTCTTTGTTTGTCTTCCTCTGTTTTACCGTTATGGAGAGAGAACAGAGCAATGCTCTGTTCTTGACACTGCAACAAACACGAGATA
CTACGATAGAATTTTTTTCTTTTTTGTTTGGAAGAATAGAGTCGTTTTGTCAAGTACAACAATTGCAGCAGGTAGGAGACCGAAACTCCGACTTCTAGAGAGA
Protein sequenceShow/hide protein sequence
MGSRVSPEDNRVPLLLKIQQIADKISPIPISTAGDVPEVKRKKFPVNLSAGSELGVRVRPRGELMDVVEPAVAEASNRAVQMAIGYRVGGGKMRFVIPKKRKLVKTMMYH
SIKDFVISLFRTPPSAGAGTGALP