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Clc08G06260 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G06260
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:17708039..17708697
RNA-Seq ExpressionClc08G06260
SyntenyClc08G06260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647188.1 hypothetical protein Csa_019045, partial [Cucumis sativus]3.3e-1879.01Show/hide
Query:  SNNNGPSRLERSLSLTSEPRTLRQYEMAIASMQAMERQQLAGGIINGNALSAATTTTTTGGAKKGKGDREEGASGGAAAVK
        SNNNGPSRLERSLSLTSEPRTLRQYEMAIASMQAME+Q+LA G+ NG  L   T TTTTGG  KGK D EEGASGGAA  K
Subjt:  SNNNGPSRLERSLSLTSEPRTLRQYEMAIASMQAMERQQLAGGIINGNALSAATTTTTTGGAKKGKGDREEGASGGAAAVK

KAG6578921.1 hypothetical protein SDJN03_23369, partial [Cucurbita argyrosperma subsp. sororia]2.7e-0449.37Show/hide
Query:  PSRLERSLSLTSEPRTLRQYEMAIASMQAMERQQLAGGIINGNALSAATTTTTTGGAKKGKGDREEGASGGAAAVKLPA
        PS+L+RSLS  SEPR  +QY+MAIASMQAME+Q  AG     NAL          G   G+ DRE G  G +  V  PA
Subjt:  PSRLERSLSLTSEPRTLRQYEMAIASMQAMERQQLAGGIINGNALSAATTTTTTGGAKKGKGDREEGASGGAAAVKLPA

XP_031743959.1 mini-chromosome maintenance complex-binding protein-like [Cucumis sativus]3.3e-1879.01Show/hide
Query:  SNNNGPSRLERSLSLTSEPRTLRQYEMAIASMQAMERQQLAGGIINGNALSAATTTTTTGGAKKGKGDREEGASGGAAAVK
        SNNNGPSRLERSLSLTSEPRTLRQYEMAIASMQAME+Q+LA G+ NG  L   T TTTTGG  KGK D EEGASGGAA  K
Subjt:  SNNNGPSRLERSLSLTSEPRTLRQYEMAIASMQAMERQQLAGGIINGNALSAATTTTTTGGAKKGKGDREEGASGGAAAVK

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCAACAACAATGGCCCTTCTAGGCTTGAAAGATCCCTCTCCTTGACCTCCGAGCCTAGGACTCTTAGACAATATGAAATGGCAATCGCATCCATGCAGGCCAT
GGAGAGACAGCAACTCGCCGGAGGAATCATTAATGGTAATGCACTGAGTGCTGCTACTACAACTACTACTACTGGAGGAGCGAAGAAGGGAAAAGGTGATCGGGAAGAAG
GGGCGTCGGGTGGAGCAGCGGCGGTGAAGCTGCCGGCGTGA
mRNA sequenceShow/hide mRNA sequence
CCTCCTCCCACCCACCCAAAATGGGAAGCAACAACAATGGCCCTTCTAGGCTTGAAAGATCCCTCTCCTTGACCTCCGAGCCTAGGACTCTTAGACAATATGAAATGGCA
ATCGCATCCATGCAGGCCATGGAGAGACAGCAACTCGCCGGAGGAATCATTAATGGTAATGCACTGAGTGCTGCTACTACAACTACTACTACTGGAGGAGCGAAGAAGGG
AAAAGGTGATCGGGAAGAAGGGGCGTCGGGTGGAGCAGCGGCGGTGAAGCTGCCGGCGTGATGATATACATGAAAAAACTGGTGGCCGG
Protein sequenceShow/hide protein sequence
MGSNNNGPSRLERSLSLTSEPRTLRQYEMAIASMQAMERQQLAGGIINGNALSAATTTTTTGGAKKGKGDREEGASGGAAAVKLPA