; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G06340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G06340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDUF150 domain-containing protein
Genome locationClcChr08:17783229..17786033
RNA-Seq ExpressionClc08G06340
SyntenyClc08G06340
Gene Ontology termsGO:0042274 - ribosomal small subunit biogenesis (biological process)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR003728 - Ribosome maturation factor RimP
IPR028989 - Ribosome maturation factor RimP, N-terminal
IPR035956 - RimP, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148816.1 uncharacterized protein LOC101204078 [Cucumis sativus]2.0e-14589.42Show/hide
Query:  MVLITARNSRLSAVSTSL-ILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDE
        M+LITA NS LSA+S+SL ILP   FR SSISP NLPFPF++HRFPSTSNN LLL ARKRNSESQPVLK+NIV+EVSEDEEDDVL DE E+DEIMEDD E
Subjt:  MVLITARNSRLSAVSTSL-ILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDE

Query:  DYFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELA
        DYFEEEYMEDNAEVY GDG EGGGISLAGTWWDK+ALAIAEEVILSF+GDLKIYAFKTVSNSTV+VRIEKLS KSGSP+MEDIEAFSTTYRARLD AELA
Subjt:  DYFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELA

Query:  KSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPF
        KSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTN V TASSSSESDG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGRPLSKKQREWRLETPF
Subjt:  KSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPF

Query:  DSLRLVRLYSDC
        DSLRLVRLYSDC
Subjt:  DSLRLVRLYSDC

XP_008441558.1 PREDICTED: uncharacterized protein LOC103485652 isoform X1 [Cucumis melo]5.5e-14888.99Show/hide
Query:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEE-------DEI
        M+ ITA NS LSAVST   LP S FRWSSISP NLPFPF++HRFPSTSNN LLLHARKRNSESQPVLK NIV+EVSEDEEDDVL+DE EE       DEI
Subjt:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEE-------DEI

Query:  MEDDDEDYFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARL
        MEDD EDYFEEEYMEDNAEVYEGDG EGGGISLAG WWDK+ALAIAEEVILSF+GDLKIYAFKTVSNSTV+VRIEKLSNKSGSPSMEDIEAFSTTYRARL
Subjt:  MEDDDEDYFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARL

Query:  DQAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREW
        D+AELAKSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTN+V TASSSSESDG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGRPLSKKQREW
Subjt:  DQAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREW

Query:  RLETPFDSLRLVRLYSDC
        RLETPFDSLRLVRLYSDC
Subjt:  RLETPFDSLRLVRLYSDC

XP_008441560.1 PREDICTED: uncharacterized protein LOC103485652 isoform X2 [Cucumis melo]4.5e-15091Show/hide
Query:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDED
        M+ ITA NS LSAVST   LP S FRWSSISP NLPFPF++HRFPSTSNN LLLHARKRNSESQPVLK NIV+EVSEDEEDDVL+DE EEDEIMEDD ED
Subjt:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDED

Query:  YFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAK
        YFEEEYMEDNAEVYEGDG EGGGISLAG WWDK+ALAIAEEVILSF+GDLKIYAFKTVSNSTV+VRIEKLSNKSGSPSMEDIEAFSTTYRARLD+AELAK
Subjt:  YFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFD
        SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTN+V TASSSSESDG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGRPLSKKQREWRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSDC
        SLRLVRLYSDC
Subjt:  SLRLVRLYSDC

XP_022939572.1 uncharacterized protein LOC111445430 isoform X2 [Cucurbita moschata]2.2e-14488.39Show/hide
Query:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDED
        MV+IT RN RLSAV  S ILPQSGFR S ISPRNLPFPFV HRFPSTSNNPLLLHARK+NSES+PV+KRNIVEEVSEDEEDD LLDELE+DEIM+DD ED
Subjt:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDED

Query:  YFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAK
        YFEEE+MEDNAEVY GDG EGGGISLAGTWWDKEALA+AEEVILSF GDLKIYAFKTVSNSTV+VRIEKLSNKSGSP MEDIEAFS+ YRARLD+AEL+K
Subjt:  YFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFD
        +VPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTN+V T SSSSESDGIFKLVSF+IE +CC WGLADV+INREKAGKGRPLSKKQREWRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSD
        SLRLVRLYSD
Subjt:  SLRLVRLYSD

XP_038884405.1 uncharacterized protein LOC120075260 [Benincasa hispida]1.4e-15694.86Show/hide
Query:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDED
        MVLIT RNSRLSAVSTSLILP SGFRWSSISPRNLPFPFVEHR PSTSNNPLLLHARKRNSES+PVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDD ED
Subjt:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDED

Query:  YFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAK
        YFEE+YME NAEVYEGDG EGGGISLAGTWWDKEALAIAEEVILSF+GDLKIYAFKTVSNSTV+VRIEKLSNKSGSPSMEDIEAFSTTYRARLD+AELAK
Subjt:  YFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFD
        SVPEN+SLEVSSPGVERVV+IPDELDRFKERAMYVKYTN+VATASSSSESDGIFKLVSFDIEAK CTWGLADVKINREKAGKGRPLSKKQR+WRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSDC
        SLRLVRLYSDC
Subjt:  SLRLVRLYSDC

TrEMBL top hitse value%identityAlignment
A0A0A0KDA0 DUF150 domain-containing protein9.5e-14689.42Show/hide
Query:  MVLITARNSRLSAVSTSL-ILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDE
        M+LITA NS LSA+S+SL ILP   FR SSISP NLPFPF++HRFPSTSNN LLL ARKRNSESQPVLK+NIV+EVSEDEEDDVL DE E+DEIMEDD E
Subjt:  MVLITARNSRLSAVSTSL-ILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDE

Query:  DYFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELA
        DYFEEEYMEDNAEVY GDG EGGGISLAGTWWDK+ALAIAEEVILSF+GDLKIYAFKTVSNSTV+VRIEKLS KSGSP+MEDIEAFSTTYRARLD AELA
Subjt:  DYFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELA

Query:  KSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPF
        KSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTN V TASSSSESDG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGRPLSKKQREWRLETPF
Subjt:  KSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPF

Query:  DSLRLVRLYSDC
        DSLRLVRLYSDC
Subjt:  DSLRLVRLYSDC

A0A1S3B3P3 uncharacterized protein LOC103485652 isoform X12.7e-14888.99Show/hide
Query:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEE-------DEI
        M+ ITA NS LSAVST   LP S FRWSSISP NLPFPF++HRFPSTSNN LLLHARKRNSESQPVLK NIV+EVSEDEEDDVL+DE EE       DEI
Subjt:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEE-------DEI

Query:  MEDDDEDYFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARL
        MEDD EDYFEEEYMEDNAEVYEGDG EGGGISLAG WWDK+ALAIAEEVILSF+GDLKIYAFKTVSNSTV+VRIEKLSNKSGSPSMEDIEAFSTTYRARL
Subjt:  MEDDDEDYFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARL

Query:  DQAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREW
        D+AELAKSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTN+V TASSSSESDG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGRPLSKKQREW
Subjt:  DQAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREW

Query:  RLETPFDSLRLVRLYSDC
        RLETPFDSLRLVRLYSDC
Subjt:  RLETPFDSLRLVRLYSDC

A0A1S3B4D1 uncharacterized protein LOC103485652 isoform X22.2e-15091Show/hide
Query:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDED
        M+ ITA NS LSAVST   LP S FRWSSISP NLPFPF++HRFPSTSNN LLLHARKRNSESQPVLK NIV+EVSEDEEDDVL+DE EEDEIMEDD ED
Subjt:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDED

Query:  YFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAK
        YFEEEYMEDNAEVYEGDG EGGGISLAG WWDK+ALAIAEEVILSF+GDLKIYAFKTVSNSTV+VRIEKLSNKSGSPSMEDIEAFSTTYRARLD+AELAK
Subjt:  YFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFD
        SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTN+V TASSSSESDG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGRPLSKKQREWRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSDC
        SLRLVRLYSDC
Subjt:  SLRLVRLYSDC

A0A5A7UZ84 DUF150 domain-containing protein2.2e-15091Show/hide
Query:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDED
        M+ ITA NS LSAVST   LP S FRWSSISP NLPFPF++HRFPSTSNN LLLHARKRNSESQPVLK NIV+EVSEDEEDDVL+DE EEDEIMEDD ED
Subjt:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDED

Query:  YFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAK
        YFEEEYMEDNAEVYEGDG EGGGISLAG WWDK+ALAIAEEVILSF+GDLKIYAFKTVSNSTV+VRIEKLSNKSGSPSMEDIEAFSTTYRARLD+AELAK
Subjt:  YFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFD
        SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTN+V TASSSSESDG+FKLVSFDIEAKCCTWG+ADVKINREKAGKGRPLSKKQREWRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSDC
        SLRLVRLYSDC
Subjt:  SLRLVRLYSDC

A0A6J1FH63 uncharacterized protein LOC111445430 isoform X21.0e-14488.39Show/hide
Query:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDED
        MV+IT RN RLSAV  S ILPQSGFR S ISPRNLPFPFV HRFPSTSNNPLLLHARK+NSES+PV+KRNIVEEVSEDEEDD LLDELE+DEIM+DD ED
Subjt:  MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDED

Query:  YFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAK
        YFEEE+MEDNAEVY GDG EGGGISLAGTWWDKEALA+AEEVILSF GDLKIYAFKTVSNSTV+VRIEKLSNKSGSP MEDIEAFS+ YRARLD+AEL+K
Subjt:  YFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAK

Query:  SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFD
        +VPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTN+V T SSSSESDGIFKLVSF+IE +CC WGLADV+INREKAGKGRPLSKKQREWRLETPFD
Subjt:  SVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFD

Query:  SLRLVRLYSD
        SLRLVRLYSD
Subjt:  SLRLVRLYSD

SwissProt top hitse value%identityAlignment
B0SH16 Ribosome maturation factor RimP2.1e-0435.21Show/hide
Query:  SNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAKSVPENISLEVSSPGVERVVRIPDELDRFK
        +++ + + ++ L++K+GS S+ED E  S   +  LDQ         + +L+VSS G ERV+R+P++L RF+
Subjt:  SNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAKSVPENISLEVSSPGVERVVRIPDELDRFK

B0SQH2 Ribosome maturation factor RimP2.1e-0435.21Show/hide
Query:  SNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAKSVPENISLEVSSPGVERVVRIPDELDRFK
        +++ + + ++ L++K+GS S+ED E  S   +  LDQ         + +L+VSS G ERV+R+P++L RF+
Subjt:  SNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAKSVPENISLEVSSPGVERVVRIPDELDRFK

B8CW69 Ribosome maturation factor RimP4.6e-0433Show/hide
Query:  KTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFK
        K   N  +RV IE   N  G  +++  E  S     +LD+ +    + E+  LEVSSPG+ER ++  ++ DRF  +  Y+K     A  S + E  GI K
Subjt:  KTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFK

Arabidopsis top hitse value%identityAlignment
AT1G69210.1 Uncharacterised protein family UPF00906.7e-4338.18Show/hide
Query:  STSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDEDYFEEEYMEDNAEVY
        S+SL+LP++  R +   PR  PF      F S+S++P             P  +       + DEED       ++ E++ED +ED  E+E +E      
Subjt:  STSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDEDYFEEEYMEDNAEVY

Query:  EGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAKSVPENISLEVSSPG
         GDG +GGGI L G  W +  L+IA +V+     DL+++AFKT     + VR++KLS + G P+M+++E FS  ++ RLD A   K +PE+++LEVSSPG
Subjt:  EGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAKSVPENISLEVSSPG

Query:  VERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD
         ER++R+P++L RFK+  M V Y     T S  +   G+F L S D E+  C W LADV+ NR+   KGRPLS+KQ++ R+  PF   + + LY D
Subjt:  VERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSD

AT1G69210.2 Uncharacterised protein family UPF00908.2e-1734.69Show/hide
Query:  STSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDEDYFEEEYMEDNAEVY
        S+SL+LP++  R +   PR  PF      F S+S++P             P  +       + DEED       ++ E++ED +ED  E+E +E      
Subjt:  STSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDEDYFEEEYMEDNAEVY

Query:  EGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAKSVPENISLEV
         GDG +GGGI L G  W +  L+IA +V+     DL+++AFKT     + VR++KLS + G P+M+++E FS  ++ RLD A   K +PE+++LEV
Subjt:  EGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAKSVPENISLEV

AT1G77122.1 Uncharacterised protein family UPF00903.5e-8457.55Show/hide
Query:  SRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEV-------SEDEEDDVLLDELEE--------DEI
        S L A S S +   + FR    S  +L F F    F  T N     HA+++N  S    K N VEE+        E+EE+ VL +E++E        DE 
Subjt:  SRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEV-------SEDEEDDVLLDELEE--------DEI

Query:  MEDDDEDYFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARL
         EDDD+D+   E+ E   E+Y GDG  GGGI LAGT WDK ALA+A +V  SF GDL IYAFKT+ NST++VRIE+L+NK GSP+MEDIEAFST YRA+L
Subjt:  MEDDDEDYFEEEYMEDNAEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARL

Query:  DQAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREW
         +AELAKS+P+NISLEVSSPGVERVVRIP +LDR+K+R MYV+YTN      + +E DGIF+LVSFD+EAK C WG+AD+++NREKAGKGRPLSKKQREW
Subjt:  DQAELAKSVPENISLEVSSPGVERVVRIPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREW

Query:  RLETPFDSLRLVRLYSDC
        RLET F+SLRLVRL+S+C
Subjt:  RLETPFDSLRLVRLYSDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTGATTACTGCTCGTAATTCCAGGCTCTCTGCAGTTTCCACTTCACTAATCCTTCCACAAAGTGGCTTCCGATGGTCTTCAATCTCCCCCAGAAATCTTCCCTT
CCCATTTGTCGAGCATCGATTTCCTTCTACGTCGAACAATCCCCTATTACTTCATGCCAGAAAGAGAAACTCAGAGTCACAGCCAGTTCTCAAACGAAACATCGTCGAGG
AAGTGTCGGAGGACGAAGAAGATGACGTCCTTCTCGACGAACTTGAAGAAGATGAGATAATGGAAGATGATGACGAAGATTACTTTGAAGAAGAGTATATGGAGGATAAT
GCTGAAGTCTATGAAGGGGATGGCAGGGAAGGAGGTGGAATTTCCCTCGCTGGGACATGGTGGGATAAAGAAGCACTGGCTATAGCTGAAGAGGTTATTCTTTCATTTTA
TGGTGACTTGAAGATTTATGCTTTCAAAACAGTCTCTAATTCCACTGTTCGAGTGCGGATTGAAAAGCTTTCTAACAAATCGGGTTCCCCCAGTATGGAAGATATTGAGG
CTTTTTCTACAACATATCGAGCACGATTGGATCAGGCAGAGCTTGCTAAATCTGTGCCAGAGAACATATCTTTAGAGGTCTCATCTCCTGGTGTTGAACGGGTTGTTCGG
ATTCCTGACGAGCTGGATCGGTTCAAAGAGAGGGCAATGTATGTGAAATACACAAACAATGTAGCTACAGCCAGTTCGTCCTCTGAGAGTGACGGCATTTTCAAGCTTGT
GTCGTTCGACATAGAAGCGAAGTGCTGCACTTGGGGTTTAGCAGACGTGAAGATAAATAGAGAGAAGGCGGGAAAAGGAAGACCTCTTAGCAAAAAGCAAAGAGAGTGGC
GTTTAGAGACTCCTTTTGATTCATTACGTTTGGTTAGGCTGTATTCTGATTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTTGATTACTGCTCGTAATTCCAGGCTCTCTGCAGTTTCCACTTCACTAATCCTTCCACAAAGTGGCTTCCGATGGTCTTCAATCTCCCCCAGAAATCTTCCCTT
CCCATTTGTCGAGCATCGATTTCCTTCTACGTCGAACAATCCCCTATTACTTCATGCCAGAAAGAGAAACTCAGAGTCACAGCCAGTTCTCAAACGAAACATCGTCGAGG
AAGTGTCGGAGGACGAAGAAGATGACGTCCTTCTCGACGAACTTGAAGAAGATGAGATAATGGAAGATGATGACGAAGATTACTTTGAAGAAGAGTATATGGAGGATAAT
GCTGAAGTCTATGAAGGGGATGGCAGGGAAGGAGGTGGAATTTCCCTCGCTGGGACATGGTGGGATAAAGAAGCACTGGCTATAGCTGAAGAGGTTATTCTTTCATTTTA
TGGTGACTTGAAGATTTATGCTTTCAAAACAGTCTCTAATTCCACTGTTCGAGTGCGGATTGAAAAGCTTTCTAACAAATCGGGTTCCCCCAGTATGGAAGATATTGAGG
CTTTTTCTACAACATATCGAGCACGATTGGATCAGGCAGAGCTTGCTAAATCTGTGCCAGAGAACATATCTTTAGAGGTCTCATCTCCTGGTGTTGAACGGGTTGTTCGG
ATTCCTGACGAGCTGGATCGGTTCAAAGAGAGGGCAATGTATGTGAAATACACAAACAATGTAGCTACAGCCAGTTCGTCCTCTGAGAGTGACGGCATTTTCAAGCTTGT
GTCGTTCGACATAGAAGCGAAGTGCTGCACTTGGGGTTTAGCAGACGTGAAGATAAATAGAGAGAAGGCGGGAAAAGGAAGACCTCTTAGCAAAAAGCAAAGAGAGTGGC
GTTTAGAGACTCCTTTTGATTCATTACGTTTGGTTAGGCTGTATTCTGATTGCTGA
Protein sequenceShow/hide protein sequence
MVLITARNSRLSAVSTSLILPQSGFRWSSISPRNLPFPFVEHRFPSTSNNPLLLHARKRNSESQPVLKRNIVEEVSEDEEDDVLLDELEEDEIMEDDDEDYFEEEYMEDN
AEVYEGDGREGGGISLAGTWWDKEALAIAEEVILSFYGDLKIYAFKTVSNSTVRVRIEKLSNKSGSPSMEDIEAFSTTYRARLDQAELAKSVPENISLEVSSPGVERVVR
IPDELDRFKERAMYVKYTNNVATASSSSESDGIFKLVSFDIEAKCCTWGLADVKINREKAGKGRPLSKKQREWRLETPFDSLRLVRLYSDC