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Clc08G06440 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G06440
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:17885578..17885949
RNA-Seq ExpressionClc08G06440
SyntenyClc08G06440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058917.1 hypothetical protein E6C27_scaffold98G00860 [Cucumis melo var. makuwa]7.5e-0858.75Show/hide
Query:  MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGS-ESISDHPSSSTSSNRREESVPVGSLS
        M++ PKSRKRK+K+ PQPPR  KA  KTIEV EE D L  GY+V+Q LTG GS  SI DH  SS+S +R ++ VP+G LS
Subjt:  MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGS-ESISDHPSSSTSSNRREESVPVGSLS
KAE8647158.1 hypothetical protein Csa_018821 [Cucumis sativus]4.7e-1061.73Show/hide
Query:  MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGSE--SISDHPSSSTSSNRREESVPVGSLS
        M++SPKSRKRK+K PPQPPRA +A  KTIEV+E      FGY+V+QLL G GS   SI+DHPSSS S+  R+E VP+G LS
Subjt:  MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGSE--SISDHPSSSTSSNRREESVPVGSLS
TrEMBL top hitse value%identityAlignment
A0A0A0KF90 Uncharacterized protein2.3e-1061.73Show/hide
Query:  MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGSE--SISDHPSSSTSSNRREESVPVGSLS
        M++SPKSRKRK+K PPQPPRA +A  KTIEV+E      FGY+V+QLL G GS   SI+DHPSSS S+  R+E VP+G LS
Subjt:  MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGSE--SISDHPSSSTSSNRREESVPVGSLS
A0A5D3DJD1 Uncharacterized protein3.7e-0858.75Show/hide
Query:  MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGS-ESISDHPSSSTSSNRREESVPVGSLS
        M++ PKSRKRK+K+ PQPPR  KA  KTIEV EE D L  GY+V+Q LTG GS  SI DH  SS+S +R ++ VP+G LS
Subjt:  MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGS-ESISDHPSSSTSSNRREESVPVGSLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGTTCACCAAAGTCCCGAAAGCGAAAGATGAAGAAGCCGCCACAGCCGCCGAGAGCCGCCAAAGCCCGGCCAAAGACGATTGAAGTGGACGAAGAACATGATTC
CTTAGATTTTGGATACATAGTCCAACAACTCCTCACCGGCGATGGCAGCGAATCCATCTCCGACCACCCTTCTAGTTCTACATCTTCCAATCGTCGGGAAGAATCTGTGC
CAGTGGGGAGCCTGTCCGAGCCCCATTTCTCTGCCGCCGGTTTCTCCAAACGCTTTCACATCGCGGCCGCTGCCACCGTCGCCAGAAGAAGATCTGAGTATTTACGATTA
TGGCGGTTGGGAAGAGCCGGCAGCGCCATACCCTTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGTTCACCAAAGTCCCGAAAGCGAAAGATGAAGAAGCCGCCACAGCCGCCGAGAGCCGCCAAAGCCCGGCCAAAGACGATTGAAGTGGACGAAGAACATGATTC
CTTAGATTTTGGATACATAGTCCAACAACTCCTCACCGGCGATGGCAGCGAATCCATCTCCGACCACCCTTCTAGTTCTACATCTTCCAATCGTCGGGAAGAATCTGTGC
CAGTGGGGAGCCTGTCCGAGCCCCATTTCTCTGCCGCCGGTTTCTCCAAACGCTTTCACATCGCGGCCGCTGCCACCGTCGCCAGAAGAAGATCTGAGTATTTACGATTA
TGGCGGTTGGGAAGAGCCGGCAGCGCCATACCCTTTTCTTAA
Protein sequenceShow/hide protein sequence
MMSSPKSRKRKMKKPPQPPRAAKARPKTIEVDEEHDSLDFGYIVQQLLTGDGSESISDHPSSSTSSNRREESVPVGSLSEPHFSAAGFSKRFHIAAAATVARRRSEYLRL
WRLGRAGSAIPFS