; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G06500 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G06500
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRNA-binding protein 2
Genome locationClcChr08:17942376..17949568
RNA-Seq ExpressionClc08G06500
SyntenyClc08G06500
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031743536.1 RNA-binding protein 2 isoform X2 [Cucumis sativus]8.8e-15195.6Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPRTDYELP+SGL TGH+MHNYL SDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGPLLPDPIVMSRPPAVSPDLAPNGRN+EYGNHLPVD MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKRYYSRNLESSCTLQHTK
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSG+GGKR YSRNLESSC LQHTK
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKRYYSRNLESSCTLQHTK

XP_031743539.1 RNA-binding protein 2 isoform X5 [Cucumis sativus]8.8e-15195.6Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPRTDYELP+SGL TGH+MHNYL SDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGPLLPDPIVMSRPPAVSPDLAPNGRN+EYGNHLPVD MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKRYYSRNLESSCTLQHTK
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSG+GGKR YSRNLESSC LQHTK
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKRYYSRNLESSCTLQHTK

XP_038884975.1 RNA-binding protein 2-like isoform X1 [Benincasa hispida]3.3e-15094.96Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPG+LKRPRT+YELPSSGLP+GHEMHNYLASDDRGG RSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAH-----IFRPFVGYKELRLVSKESK
        SRMPGPLLPDPIVMSRPPAVSPD+APNGRNIEYGNHLPVD MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA      IFRPFVGYKELRLVSKESK
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAH-----IFRPFVGYKELRLVSKESK

Query:  HRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKRYYSRNLESSCTLQHTK
        HRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSG+GGKRYYSRNLESSCTLQHTK
Subjt:  HRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKRYYSRNLESSCTLQHTK

XP_038884976.1 RNA-binding protein 2-like isoform X2 [Benincasa hispida]5.5e-15397.07Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPG+LKRPRT+YELPSSGLP+GHEMHNYLASDDRGG RSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        SRMPGPLLPDPIVMSRPPAVSPD+APNGRNIEYGNHLPVD MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKRYYSRNLESSCTLQHTK
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSG+GGKRYYSRNLESSCTLQHTK
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKRYYSRNLESSCTLQHTK

XP_038884977.1 RNA-binding protein 2-like isoform X3 [Benincasa hispida]3.0e-15189.14Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPG+LKRPRT+YELPSSGLP+GHEMHNYLASDDRGG RSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAH-----IFRPFVGYKELRLVSKESK
        SRMPGPLLPDPIVMSRPPAVSPD+APNGRNIEYGNHLPVD MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVA      IFRPFVGYKELRLVSKESK
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAH-----IFRPFVGYKELRLVSKESK

Query:  HRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKRYYSRNLESSCTLQHTK------SVYSAGHSSHTNLQFL
        HRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSG+GGKRYYSRNLESSCTLQHTK      S +S G+++  +LQ L
Subjt:  HRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKRYYSRNLESSCTLQHTK------SVYSAGHSSHTNLQFL

Query:  RPIP
           P
Subjt:  RPIP

TrEMBL top hitse value%identityAlignment
A0A0A0KCN5 RRM domain-containing protein3.3e-15165.12Show/hide
Query:  ELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAVSPDLAP
        ELP+SGL TGH+MHNYL SDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG+RMPGPLLPDPIVMSRPPAVSPDLAP
Subjt:  ELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPDPIVMSRPPAVSPDLAP

Query:  NGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
        NGRN+EYGNHLPVD MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK
Subjt:  NGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYK

Query:  MDEQDPESNYLRLQFSRHPGPRSGSGTGGK-----RYYSRNLESS--------CTLQHTKSVYSAGHSS----------HTNLQFLR-------------
        MDEQDPESNYLRLQFSRHPGPRSGSG+GGK        +  L S+         +    KS Y  GHS+          H NL   R             
Subjt:  MDEQDPESNYLRLQFSRHPGPRSGSGTGGK-----RYYSRNLESS--------CTLQHTKSVYSAGHSS----------HTNLQFLR-------------

Query:  --------------------------------------------------------------------PIPSPSEKPYEPQPTSTPLKQSQPPLSPFAQP
                                                                            PIPSPSEKPYEP P   PLKQ Q PLSP + P
Subjt:  --------------------------------------------------------------------PIPSPSEKPYEPQPTSTPLKQSQPPLSPFAQP

Query:  LDPYFPFVYIPMPSPSQKPYEDASPLPSPVFARPVVPYYPFRFPPPPPRQYLY-PPNPIDHLQSPSPLPLPPY
        L PYFPFVY+P+PSPSQKP E A+P PS VF RPVVPYY FRF PP P++  Y PPNPI HLQ PSPLP  PY
Subjt:  LDPYFPFVYIPMPSPSQKPYEDASPLPSPVFARPVVPYYPFRFPPPPPRQYLY-PPNPIDHLQSPSPLPLPPY

A0A1S3B4F0 RNA-binding protein 23.6e-14296.11Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSP MLKRPRTDYELP+SGL TGH+MHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVD MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG G+ GKR
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR

A0A6J1CKA2 RNA-binding protein 2-like5.2e-14194.55Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPR DYELPSSGLPTGHEMHNYL SDDRGGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        SRMPGP +PDP+VMSRPPAVSPDLAPNGRNIEYGNHLP+D M+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSG+GGKR
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR

A0A6J1FDW9 RNA-binding protein 2-like isoform X21.5e-13289.88Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPRT+YE PSSGLP  HEMHNY+A+DD GGPR+VKDTQTIGSAYDRYLQSVQ SSF SGEVPTHGEMGMGRP+ANRMP+ 
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGPLLPDP+VMSRP AVSPDLA NGRNIEY NHLPVD  +RP RETVPLPPDA+NTLYVEGLP DSSRREVAHIFRPFVGYKELRLV+KESKHRGGD
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSG+GGKR
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR

A0A6J1JXN9 RNA-binding protein 2-like isoform X29.5e-13591.05Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MADDYWNRQQPLLPSPGMLKRPRT+YE PSSGLP  HEMHNY+A+DD GGPR+VKDTQTIGSAYDRYLQSVQLSSF SGEVPTHGEMGMGRP+ANRMP+G
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD
        +RMPGPLLPDP+VMSRP AVSPDLA NGRNIEYGNHLPVD  +RP RETVPLPPDA+NTLYVEGLP DSSRREVAHIFRPFVGYKELRLV+KESKHRGGD
Subjt:  SRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGD

Query:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR
        PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSG+GGKR
Subjt:  PLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A9.7e-6053.78Show/hide
Query:  MADDYWNRQ-QPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV
        MAD YWN+Q Q   P  G +KRPR+D+E PSS +  GH    Y   +D      V DT+TIGSAYDRYLQSVQ     SGE    G + MGR        
Subjt:  MADDYWNRQ-QPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV

Query:  GSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGG
        G  +      D  ++ R   +  D  PNG  I +      DP    GR    LP DASNTLYVEGLP + SRREVAHIFRPFVGY+E+RLV+K+SKHR G
Subjt:  GSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGG

Query:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG
        DP++LCFVDF NPACAATA+SALQGY+MDE + +S +LRLQFSR PG R G
Subjt:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG

F4HWF9 Nuclear speckle RNA-binding protein B7.2e-6351.94Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASD-DRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV
        ++ D+++   P  P  G      T Y +PS       +MH+YL+ D DRG P SVKDT++IGSAYDRYLQS+Q    PS E      +GM R   + M  
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASD-DRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV

Query:  GSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGG
           MPGP + + ++     ++  D  PNGR++ +G    +D + RPGRE  PLPPD SNTLYVEGLP + SRREV+HIFRPFVGY+E+RLV+++SKHR G
Subjt:  GSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGG

Query:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR
        DP +LCFVDF N ACAATA+SALQ Y+MDE +P+S  LRLQF R+PGPR G   GG+R
Subjt:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR

G7ID19 RNA-binding protein 24.3e-8462.07Show/hide
Query:  MADDYWNRQQPLLPSP-GMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV
        MAD +WNRQQ  LP P GMLKRPRT+Y+   SG+ +G+E+HNY+A ++  G + + DT+ +GSAYDR+LQS  L+SF SGE    G +G  R V      
Subjt:  MADDYWNRQQPLLPSP-GMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV

Query:  GSRMPGPLLPDPIVMSRPPAV--SPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHR
           +PG  L DP  M     V   PDL+ NGR++ +G  LP+D +SRPG ET+PLP DAS+TLYVEGLP DS++REVAHIFRPFVGY+E+RLV+KESKHR
Subjt:  GSRMPGPLLPDPIVMSRPPAV--SPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHR

Query:  GGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGS-GTGGKR
        GGDPLILCFVDFANPACAATA+SALQGYK+DE +PES+YLRLQFSR PG RSG  G  GKR
Subjt:  GGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGS-GTGGKR

Q6JB11 Protein MATERNALLY EXPRESSED GENE 57.5e-2864.77Show/hide
Query:  MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDE
        M   GR   PLPPDAS+TLY+EGLP + +RREV+HIFRPFVG++E+RLV+KES+H GGDP +LCFVDF NPA A  A+ ALQG+  D+
Subjt:  MSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDE

Q8H0P8 RNA-binding protein 11.1e-8464.43Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG
        MAD YWNRQQ LLP  G+ KRPR DYE+P+SGLP+G+EMH     +DR G   VKD++TIGSAYDRYLQ  Q+ SF SGE  T G +G+ R +       
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVG

Query:  SRMPGPLLPDPIVM-SRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGG
          +P   L DP  M  R     PDLAPNGR + YG   P+DP+SR G E   LPPDAS TLY+EGLP D +RREVAHIFRPFVGY+E+RLVSKE+KHR G
Subjt:  SRMPGPLLPDPIVM-SRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGG

Query:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSG
        DPLILCFVDFANPACAATA+SALQGYK+DE +PES++LRLQFSR+PGPRSG G
Subjt:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding5.1e-6451.94Show/hide
Query:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASD-DRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV
        ++ D+++   P  P  G      T Y +PS       +MH+YL+ D DRG P SVKDT++IGSAYDRYLQS+Q    PS E      +GM R   + M  
Subjt:  MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASD-DRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV

Query:  GSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGG
           MPGP + + ++     ++  D  PNGR++ +G    +D + RPGRE  PLPPD SNTLYVEGLP + SRREV+HIFRPFVGY+E+RLV+++SKHR G
Subjt:  GSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGG

Query:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR
        DP +LCFVDF N ACAATA+SALQ Y+MDE +P+S  LRLQF R+PGPR G   GG+R
Subjt:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR

AT1G21320.2 nucleotide binding;nucleic acid binding1.6e-7054.17Show/hide
Query:  MADDYWNRQQ----PLLPSPGML--KRPRTDYELPSSGLPTGHEMHNYLASD-DRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPV
        MAD+YWN+Q+    P+  +P +L  KRPR+D++     +P+G +MH+YL+ D DRG P SVKDT++IGSAYDRYLQS+Q    PS E      +GM R  
Subjt:  MADDYWNRQQ----PLLPSPGML--KRPRTDYELPSSGLPTGHEMHNYLASD-DRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPV

Query:  ANRMPVGSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKE
         + M     MPGP + + ++     ++  D  PNGR++ +G    +D + RPGRE  PLPPD SNTLYVEGLP + SRREV+HIFRPFVGY+E+RLV+++
Subjt:  ANRMPVGSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKE

Query:  SKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR
        SKHR GDP +LCFVDF N ACAATA+SALQ Y+MDE +P+S  LRLQF R+PGPR G   GG+R
Subjt:  SKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKR

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.9e-6153.78Show/hide
Query:  MADDYWNRQ-QPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV
        MAD YWN+Q Q   P  G +KRPR+D+E PSS +  GH    Y   +D      V DT+TIGSAYDRYLQSVQ     SGE    G + MGR        
Subjt:  MADDYWNRQ-QPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPV

Query:  GSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGG
        G  +      D  ++ R   +  D  PNG  I +      DP    GR    LP DASNTLYVEGLP + SRREVAHIFRPFVGY+E+RLV+K+SKHR G
Subjt:  GSRMPGPLLPDPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGG

Query:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG
        DP++LCFVDF NPACAATA+SALQGY+MDE + +S +LRLQFSR PG R G
Subjt:  DPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-4361.7Show/hide
Query:  DPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDF
        D  ++ R   +  D  PNG  I +      DP    GR    LP DASNTLYVEGLP + SRREVAHIFRPFVGY+E+RLV+K+SKHR GDP++LCFVDF
Subjt:  DPIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDF

Query:  ANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG
         NPACAATA+SALQGY+MDE + +S +LRLQFSR PG R G
Subjt:  ANPACAATAMSALQGYKMDEQDPESNYLRLQFSRHPGPRSG

AT4G18670.1 Leucine-rich repeat (LRR) family protein2.4e-0540.52Show/hide
Query:  SPSEKPYEPQPTSTPLKQSQPP----LSPFAQPLDPYFPFVYIPMPSPSQKPYED--ASPLPSPV--------FARPVVP---YYPFRFPPPPPRQYLYP
        SP   P  P PT +P     PP     SPF  P  P     Y P PSPSQ P      +P PSP+        FA P  P   YY    PPPPP   L P
Subjt:  SPSEKPYEPQPTSTPLKQSQPP----LSPFAQPLDPYFPFVYIPMPSPSQKPYED--ASPLPSPV--------FARPVVP---YYPFRFPPPPPRQYLYP

Query:  PNPIDHLQSPSPLPLP
        P P  H  SP P P P
Subjt:  PNPIDHLQSPSPLPLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATGATTATTGGAATCGCCAGCAGCCTCTGCTTCCCTCGCCTGGCATGCTTAAACGACCTCGTACTGATTATGAACTTCCATCCTCTGGATTGCCTACTGGCCA
TGAGATGCACAATTACTTAGCAAGTGATGATCGTGGTGGTCCTCGGTCTGTAAAAGATACACAAACAATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTT
CTTCTTTTCCTTCCGGAGAAGTACCTACCCATGGAGAAATGGGCATGGGAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGGCCTTTATTACCTGAT
CCTATTGTAATGAGTCGTCCTCCTGCAGTTTCTCCTGATCTTGCACCAAATGGTCGAAATATTGAGTATGGTAATCATCTGCCTGTAGATCCGATGAGCAGACCTGGACG
TGAAACTGTGCCTCTTCCTCCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTCCAGATAGTTCCCGGAGGGAAGTAGCTCATATTTTCCGCCCCTTTGTGGGAT
ATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATCGTGGTGGGGACCCCCTAATATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCTGCAACTGCCATGAGT
GCATTGCAAGGTTATAAAATGGACGAACAAGATCCTGAATCTAATTATTTGCGACTACAATTCTCACGACATCCAGGTCCGAGGTCTGGATCTGGAACTGGCGGCAAAAG
GTACTATAGCAGGAATTTGGAGAGTTCCTGTACCCTCCAACACACAAAATCAGTCTATTCTGCTGGTCATTCCTCGCATACAAATCTGCAATTCCTCAGACCAATCCCAT
CCCCATCTGAGAAGCCTTATGAACCACAACCCACATCAACACCACTAAAGCAGTCCCAACCGCCATTATCTCCTTTTGCCCAGCCTCTAGATCCCTATTTTCCTTTTGTA
TACATACCGATGCCATCCCCATCTCAAAAGCCTTATGAAGATGCATCACCTTTGCCGTCTCCGGTGTTCGCAAGACCTGTAGTTCCCTATTATCCCTTCCGATTTCCACC
ACCTCCCCCTCGACAATACCTCTATCCTCCGAATCCGATTGACCACCTTCAATCGCCTTCGCCTCTGCCTCTGCCTCCTTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATGATTATTGGAATCGCCAGCAGCCTCTGCTTCCCTCGCCTGGCATGCTTAAACGACCTCGTACTGATTATGAACTTCCATCCTCTGGATTGCCTACTGGCCA
TGAGATGCACAATTACTTAGCAAGTGATGATCGTGGTGGTCCTCGGTCTGTAAAAGATACACAAACAATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTT
CTTCTTTTCCTTCCGGAGAAGTACCTACCCATGGAGAAATGGGCATGGGAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGGCCTTTATTACCTGAT
CCTATTGTAATGAGTCGTCCTCCTGCAGTTTCTCCTGATCTTGCACCAAATGGTCGAAATATTGAGTATGGTAATCATCTGCCTGTAGATCCGATGAGCAGACCTGGACG
TGAAACTGTGCCTCTTCCTCCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTCCAGATAGTTCCCGGAGGGAAGTAGCTCATATTTTCCGCCCCTTTGTGGGAT
ATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATCGTGGTGGGGACCCCCTAATATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCTGCAACTGCCATGAGT
GCATTGCAAGGTTATAAAATGGACGAACAAGATCCTGAATCTAATTATTTGCGACTACAATTCTCACGACATCCAGGTCCGAGGTCTGGATCTGGAACTGGCGGCAAAAG
GTACTATAGCAGGAATTTGGAGAGTTCCTGTACCCTCCAACACACAAAATCAGTCTATTCTGCTGGTCATTCCTCGCATACAAATCTGCAATTCCTCAGACCAATCCCAT
CCCCATCTGAGAAGCCTTATGAACCACAACCCACATCAACACCACTAAAGCAGTCCCAACCGCCATTATCTCCTTTTGCCCAGCCTCTAGATCCCTATTTTCCTTTTGTA
TACATACCGATGCCATCCCCATCTCAAAAGCCTTATGAAGATGCATCACCTTTGCCGTCTCCGGTGTTCGCAAGACCTGTAGTTCCCTATTATCCCTTCCGATTTCCACC
ACCTCCCCCTCGACAATACCTCTATCCTCCGAATCCGATTGACCACCTTCAATCGCCTTCGCCTCTGCCTCTGCCTCCTTACTAA
Protein sequenceShow/hide protein sequence
MADDYWNRQQPLLPSPGMLKRPRTDYELPSSGLPTGHEMHNYLASDDRGGPRSVKDTQTIGSAYDRYLQSVQLSSFPSGEVPTHGEMGMGRPVANRMPVGSRMPGPLLPD
PIVMSRPPAVSPDLAPNGRNIEYGNHLPVDPMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMS
ALQGYKMDEQDPESNYLRLQFSRHPGPRSGSGTGGKRYYSRNLESSCTLQHTKSVYSAGHSSHTNLQFLRPIPSPSEKPYEPQPTSTPLKQSQPPLSPFAQPLDPYFPFV
YIPMPSPSQKPYEDASPLPSPVFARPVVPYYPFRFPPPPPRQYLYPPNPIDHLQSPSPLPLPPY