; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G06630 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G06630
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:18079300..18079641
RNA-Seq ExpressionClc08G06630
SyntenyClc08G06630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054906.1 hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa]4.1e-0839.25Show/hide
Query:  AYLVFTILVASISPSSPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIP
        AYL   I +A +S  SPS  S +A     H  P  PPL R ++  +   S P  P + + P KP +R+N +RK KC +     +K  + S++PWP+CP+ 
Subjt:  AYLVFTILVASISPSSPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIP

Query:  ASPPPPF
         SPPPPF
Subjt:  ASPPPPF

KAA0054910.1 hypothetical protein E6C27_scaffold43052G00380 [Cucumis melo var. makuwa]6.9e-1658.04Show/hide
Query:  AAYLVFTIL-VASISPSSPSRASAAANYAYRHSSPPLPPLHRQIIL-FSH--DGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWP
        AA+LVF IL VA IS SSP RA A   Y YR S  PLPPLH++IIL FSH    SP  W  +N S  K  R + A+RKY C KE EK+ K P  SQEPWP
Subjt:  AAYLVFTIL-VASISPSSPSRASAAANYAYRHSSPPLPPLHRQIIL-FSH--DGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWP

Query:  ECPIPASPPPPF
         CP+PA  PPPF
Subjt:  ECPIPASPPPPF

KAE8646677.1 hypothetical protein Csa_023590, partial [Cucumis sativus]1.5e-0741.3Show/hide
Query:  SPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIPASPPPPF
        SPS  S AA  A  +  P  PPL R ++  +   S PP P + + P K  RR+N +RK KC +     +K  + +++PWP+CP+P SPPPPF
Subjt:  SPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIPASPPPPF

TrEMBL top hitse value%identityAlignment
A0A0A0KCN7 Uncharacterized protein1.5e-1960Show/hide
Query:  AAYLVFTIL-VASISPSSPSRASAAANYAYRHSSPPLPPLHRQIIL-FSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPEC
        AA+ VF IL VA ISP+SP RASA   Y Y  SS PL PLH  IIL FSH  SP PW  SN+S  K  R +N +RKY C KE EK+ K P  SQ+PWP C
Subjt:  AAYLVFTIL-VASISPSSPSRASAAANYAYRHSSPPLPPLHRQIIL-FSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPEC

Query:  PIPASPPPPF
        P+PA PPPPF
Subjt:  PIPASPPPPF

A0A0A0KEF9 Uncharacterized protein4.0e-0941.12Show/hide
Query:  AYLVFTILVASISPSSPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIP
        AYL   IL+A ++  SPS  S AA  A  +  P  PPL R ++  +   S PP P + + P K  RR+N +RK KC +     +K  + +++PWP+CP+P
Subjt:  AYLVFTILVASISPSSPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIP

Query:  ASPPPPF
         SPPPPF
Subjt:  ASPPPPF

A0A5A7UHY5 Uncharacterized protein3.3e-1658.04Show/hide
Query:  AAYLVFTIL-VASISPSSPSRASAAANYAYRHSSPPLPPLHRQIIL-FSH--DGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWP
        AA+LVF IL VA IS SSP RA A   Y YR S  PLPPLH++IIL FSH    SP  W  +N S  K  R + A+RKY C KE EK+ K P  SQEPWP
Subjt:  AAYLVFTIL-VASISPSSPSRASAAANYAYRHSSPPLPPLHRQIIL-FSH--DGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWP

Query:  ECPIPASPPPPF
         CP+PA  PPPF
Subjt:  ECPIPASPPPPF

A0A5D3DGG9 Uncharacterized protein2.0e-0839.25Show/hide
Query:  AYLVFTILVASISPSSPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIP
        AYL   I +A +S  SPS  S +A     H  P  PPL R ++  +   S P  P + + P KP +R+N +RK KC +     +K  + S++PWP+CP+ 
Subjt:  AYLVFTILVASISPSSPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIP

Query:  ASPPPPF
         SPPPPF
Subjt:  ASPPPPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCAGCTTGGGCGGCATACTTAGTGTTTACCATTTTGGTGGCTTCAATTTCTCCAAGCTCGCCGTCGAGAGCTTCAGCCGCCGCAAACTACGCCTACCGTCACTC
TTCTCCTCCTCTGCCGCCGCTCCACCGTCAAATAATCCTCTTCAGTCACGACGGCTCTCCCCCACCGTGGCCGCCGTCGAACAAGTCTCCTCTGAAACCATTCCGCCGTC
TAAATGCTCAGCGTAAATACAAGTGTCCCAAAGAATCTGAAAAACGAGATAAACATCCAGAGAGAAGTCAAGAACCTTGGCCAGAGTGCCCCATCCCAGCATCGCCGCCG
CCTCCATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCAGCTTGGGCGGCATACTTAGTGTTTACCATTTTGGTGGCTTCAATTTCTCCAAGCTCGCCGTCGAGAGCTTCAGCCGCCGCAAACTACGCCTACCGTCACTC
TTCTCCTCCTCTGCCGCCGCTCCACCGTCAAATAATCCTCTTCAGTCACGACGGCTCTCCCCCACCGTGGCCGCCGTCGAACAAGTCTCCTCTGAAACCATTCCGCCGTC
TAAATGCTCAGCGTAAATACAAGTGTCCCAAAGAATCTGAAAAACGAGATAAACATCCAGAGAGAAGTCAAGAACCTTGGCCAGAGTGCCCCATCCCAGCATCGCCGCCG
CCTCCATTCTAG
Protein sequenceShow/hide protein sequence
MAAAWAAYLVFTILVASISPSSPSRASAAANYAYRHSSPPLPPLHRQIILFSHDGSPPPWPPSNKSPLKPFRRLNAQRKYKCPKESEKRDKHPERSQEPWPECPIPASPP
PPF