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Clc08G06640 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G06640
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:18084806..18085186
RNA-Seq ExpressionClc08G06640
SyntenyClc08G06640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054906.1 hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa]4.2e-2666.98Show/hide
Query:  AYLFFAILVA--SFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYPAKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRK
        AYLF AI +A  SFSPSS S  A A  S+GI + P LPR LLF +D S LP  PAA+EYPAKPL+RVNGERK+KCT+A RNG+K  K +KDPWPKC V K
Subjt:  AYLFFAILVA--SFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYPAKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRK

Query:  SPPPPF
        SPPPPF
Subjt:  SPPPPF
KAE8646677.1 hypothetical protein Csa_023590, partial [Cucumis sativus]6.5e-2771.58Show/hide
Query:  ASFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYPAKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRKSPPPPF
        ASFSPSS S  A AA SYGI + P LPRPLLF +D S LPP PAA+EYPAK  RRVNGERK+KC++A RNG+K  KP KDPWPKC V KSPPPPF
Subjt:  ASFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYPAKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRKSPPPPF
TrEMBL top hitse value%identityAlignment
A0A0A0KEF9 Uncharacterized protein2.0e-2971.7Show/hide
Query:  AYLFFAIL--VASFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYPAKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRK
        AYLF AIL  VASFSPSS S  A AA SYGI + P LPRPLLF +D S LPP PAA+EYPAK  RRVNGERK+KC++A RNG+K  KP KDPWPKC V K
Subjt:  AYLFFAIL--VASFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYPAKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRK

Query:  SPPPPF
        SPPPPF
Subjt:  SPPPPF
A0A5D3DGG9 Uncharacterized protein2.0e-2666.98Show/hide
Query:  AYLFFAILVA--SFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYPAKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRK
        AYLF AI +A  SFSPSS S  A A  S+GI + P LPR LLF +D S LP  PAA+EYPAKPL+RVNGERK+KCT+A RNG+K  K +KDPWPKC V K
Subjt:  AYLFFAILVA--SFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYPAKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRK

Query:  SPPPPF
        SPPPPF
Subjt:  SPPPPF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAGCATTGGCGGCTTATCTATTTTTTGCCATTTTGGTGGCATCCTTCTCTCCGAGCTCGCCCTCGAAAGTTGCGGCCGCTGCCACAAGCTACGGTATTTCTTT
CCTTCCACTGCTGCCACGTCCGCTCTTATTCCGTCACGACAGCAGCTATCTCCCACCGTTGCCAGCGGCGAAGGAGTATCCAGCGAAACCCCTTCGTCGTGTAAATGGTG
AGCGCAAAAACAAGTGTACCAAAGCACACAGAAATGGAGATAAAGTTACAAAGCCGACCAAGGATCCGTGGCCGAAGTGCTCCGTTCGCAAATCGCCACCGCCTCCATTC
TAG
mRNA sequenceShow/hide mRNA sequence
CATGGCGTCAGCATTGGCGGCTTATCTATTTTTTGCCATTTTGGTGGCATCCTTCTCTCCGAGCTCGCCCTCGAAAGTTGCGGCCGCTGCCACAAGCTACGGTATTTCTT
TCCTTCCACTGCTGCCACGTCCGCTCTTATTCCGTCACGACAGCAGCTATCTCCCACCGTTGCCAGCGGCGAAGGAGTATCCAGCGAAACCCCTTCGTCGTGTAAATGGT
GAGCGCAAAAACAAGTGTACCAAAGCACACAGAAATGGAGATAAAGTTACAAAGCCGACCAAGGATCCGTGGCCGAAGTGCTCCGTTCGCAAATCGCCACCGCCTCCATT
CTAGCTCTGCAACAATTTATGAGAGGTTTTACGTAAAAGACGATACTAATG
Protein sequenceShow/hide protein sequence
MASALAAYLFFAILVASFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYPAKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRKSPPPPF