; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G06680 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G06680
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationClcChr08:18145851..18147510
RNA-Seq ExpressionClc08G06680
SyntenyClc08G06680
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAI52949.1 light-harvesting complex II protein [Citrullus lanatus subsp. vulgaris]5.2e-14499.22Show/hide
Query:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPW RTAENFAN TGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

KAG6578893.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.7e-14296.86Show/hide
Query:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSG VLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLV+VAA+QPKKSWIPAVKGGGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ+VEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

KAG7016421.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]7.5e-14397.25Show/hide
Query:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSG VLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLV+VAAAQPKKSWIPAVKGGGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ+VEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022993917.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]3.3e-14397.65Show/hide
Query:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSG VLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLV+VAAAQPKKSWIPAVKGGGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ+VEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_023550942.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita pepo subsp. pepo]2.2e-14296.86Show/hide
Query:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSG VLNGLGSPFL GGSRTQTLLAGARGGVNVVGSRKLV+VAAAQPKKSWIPAVKGGGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ+VEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDTEKLERLKLAEIKHAR+AMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

TrEMBL top hitse value%identityAlignment
A0A5D3DGI0 Chlorophyll a-b binding protein, chloroplastic9.8e-14195.69Show/hide
Query:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSG VLNGLGSPFLRG SRT+TLLAGARGGVNVV S KLVV+AAAQPKKSWIP V+GGGNL+DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ+VEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGT+KDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1FGC5 Chlorophyll a-b binding protein, chloroplastic1.4e-14296.86Show/hide
Query:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSG VLNGLGSPFL GGSRTQTLLAGARGGVNVVGSRKLV+VAAAQPKKSWIPAVKGGGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ+VEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JEC2 Chlorophyll a-b binding protein, chloroplastic2.6e-14196.08Show/hide
Query:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSG +LNGLGSPFL GGSRTQTLLAGARGGVNVV SRKLV+VAAAQPKKSWIPAVKGGGN IDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ+VEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGT+KDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JU87 Chlorophyll a-b binding protein, chloroplastic1.6e-14397.65Show/hide
Query:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSG VLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLV+VAAAQPKKSWIPAVKGGGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ+VEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

D1MWY9 Chlorophyll a-b binding protein, chloroplastic2.5e-14499.22Show/hide
Query:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPW RTAENFAN TGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

SwissProt top hitse value%identityAlignment
P27524 Chlorophyll a-b binding protein CP24 10A, chloroplastic2.0e-12282.03Show/hide
Query:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGG-VNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE
        MA TS  VLNGL S FL GG+++Q LLA      V    + K   V AA  KKSWIPAV+GGGNL+DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE
Subjt:  MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGG-VNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE

Query:  LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDP
        LIHGRWAMAAV+GIFVGQAWSGIPWFEAGADPGAIAPFSFG+LLGTQL+LMGWVESKRWVDFF+P+SQ+VEWATPWS+TAENFAN TGEQGYPGGKFFDP
Subjt:  LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        L  AGT+ +GVY+PDTEKLERLK+AEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P27525 Chlorophyll a-b binding protein CP24 10B, chloroplastic3.7e-12182.49Show/hide
Query:  MAATSGT-VLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAA-QPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREA
        M  TS T VLNGL S FL GG +TQ LL GA     V   ++ VV AAA  PKKSWIPAVK GGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREA
Subjt:  MAATSGT-VLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAA-QPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREA

Query:  ELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFD
        ELIHGRWAMAAV+GIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF+ +SQ+++WATPWS+TAENFAN TGEQGYPGGKFFD
Subjt:  ELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFD

Query:  PLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        PL  AGT+ +GVY+PDTEKLERLKLAEIKH+R+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  PLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P36494 Chlorophyll a-b binding protein CP24, chloroplastic1.9e-12080.69Show/hide
Query:  AATSGT-VLNGLGSPFLRGGSR-TQTLL---AGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYR
        AATS T ++NG  SPFL GG + +Q+LL   +    GV+    + +VV AAA PKKSWIPAVKGGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYR
Subjt:  AATSGT-VLNGLGSPFLRGGSR-TQTLL---AGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYR

Query:  EAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKF
        EAELIHGRWAM AV+GIFVGQAW+GIPWFEAGADPGA+APFSFG+LLGTQLLLMGWVESKRWVDFF+P+SQ+VEWATPWSRTAENF+N+TGEQGYPGGKF
Subjt:  EAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKF

Query:  FDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FDPL  AGTI +GVY PDT+KLERLKLAEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic1.0e-3042.78Show/hide
Query:  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--AGADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFN
        PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI + +    + + E  +  D G+   F+   +L   Q++LMGW E +RW D   
Subjt:  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--AGADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFN

Query:  PESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
        P S  +E   P      +  N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  PESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic1.4e-3040.98Show/hide
Query:  LRGGSRTQTLLAGARGGVNVVGSRKLVVVAA--------AQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMA
        LRGG  T   L   R   +V+  R   V AA        A  + +W+P       L  P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM 
Subjt:  LRGGSRTQTLLAGARGGVNVVGSRKLVVVAA--------AQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMA

Query:  AVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDP
         V GI        +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQA E +  +   A   A    E GYPGG   +P
Subjt:  AVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
        LG A          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

Arabidopsis top hitse value%identityAlignment
AT1G15820.1 light harvesting complex photosystem II subunit 61.3e-12182.35Show/hide
Query:  ATSGTVLNGLGSPFLRGGSRTQTLLAGARG-GVNVVGSRKLVV-VAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        A SG VL+GLGS FL GG R  T LA   G G   VG + L+V  AAAQPKKSWIPAVKGGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  ATSGTVLNGLGSPFLRGGSRTQTLLAGARG-GVNVVGSRKLVV-VAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAV+GIFVGQAWSG+ WFEAGA P AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNP+SQ+VEWATPWS+TAENFAN TG+QGYPGG+FFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        G AG  +DGVY PD EKLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

AT1G19150.1 photosystem I light harvesting complex gene 67.4e-3242.78Show/hide
Query:  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--AGADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFN
        PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI + +    + + E  +  D G+   F+   +L   Q++LMGW E +RW D   
Subjt:  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--AGADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFN

Query:  PESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
        P S  +E   P      +  N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  PESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.1 photosystem I light harvesting complex gene 59.7e-3240.98Show/hide
Query:  LRGGSRTQTLLAGARGGVNVVGSRKLVVVAA--------AQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMA
        LRGG  T   L   R   +V+  R   V AA        A  + +W+P       L  P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM 
Subjt:  LRGGSRTQTLLAGARGGVNVVGSRKLVVVAA--------AQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMA

Query:  AVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDP
         V GI        +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQA E +  +   A   A    E GYPGG   +P
Subjt:  AVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
        LG A          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.2 photosystem I light harvesting complex gene 59.7e-3240.98Show/hide
Query:  LRGGSRTQTLLAGARGGVNVVGSRKLVVVAA--------AQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMA
        LRGG  T   L   R   +V+  R   V AA        A  + +W+P       L  P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM 
Subjt:  LRGGSRTQTLLAGARGGVNVVGSRKLVVVAA--------AQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMA

Query:  AVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDP
         V GI        +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQA E +  +   A   A    E GYPGG   +P
Subjt:  AVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
        LG A          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  LGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT3G61470.1 photosystem I light harvesting complex gene 23.1e-3036.24Show/hide
Query:  GGVNVVGSRKLVVVAAAQPKKS------------WIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW
        GG  +   +KL V A ++P  S            W P          PEWLDGSLPGD+GFDPLGL  DP  LKW  +AE++H RWAM    GIF+ +  
Subjt:  GGVNVVGSRKLVVVAAAQPKKS------------WIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW

Query:  SGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIP
        + I       W+ AG            +L   +L+L+GW E +RW D   P S   +   P      N    T + GYPGG +FDPLG+           
Subjt:  SGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIP

Query:  DTEKLERLKLAEIKHARIAMLAMLIFYFE
           KL+ L+  EIK+ R+AMLA++  +F+
Subjt:  DTEKLERLKLAEIKHARIAMLAMLIFYFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAACTTCTGGTACTGTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGGTAGCAGAACTCAGACCTTGTTGGCCGGAGCCAGAGGTGGTGTCAATGTTGT
CGGCTCTCGTAAGCTTGTTGTCGTCGCGGCTGCTCAGCCCAAGAAGTCTTGGATCCCTGCTGTTAAGGGTGGCGGCAACTTGATCGACCCAGAATGGCTTGATGGCTCAC
TTCCAGGCGACTACGGCTTCGACCCACTAGGGTTGGGGAAGGACCCAGCCTTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCACGGGCGGTGGGCAATGGCAGCAGTG
GTCGGAATCTTCGTAGGACAAGCGTGGAGTGGGATTCCATGGTTCGAAGCCGGAGCAGATCCAGGCGCAATCGCTCCATTCTCCTTCGGATCACTGCTAGGAACCCAGCT
TCTGCTAATGGGATGGGTTGAAAGCAAGCGATGGGTGGATTTCTTCAACCCAGAATCTCAAGCGGTGGAATGGGCGACGCCATGGTCGAGAACAGCAGAGAACTTCGCAA
ATGCAACCGGAGAACAAGGGTATCCCGGAGGAAAATTCTTCGATCCATTGGGATTTGCAGGAACTATTAAAGATGGAGTTTACATTCCGGACACGGAGAAATTGGAGAGA
TTGAAGTTGGCGGAGATCAAGCATGCTAGAATCGCTATGTTAGCAATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCATTGGGTGCTCTTGGATTGTAA
mRNA sequenceShow/hide mRNA sequence
CGTAAAACTAAACTTCTTTTGGTAACAAATAAAATTACACTAAATATTCTTATTTCTAACTCAACTTTACACTCAAAACACAAATCAAATTAAGAAGTTGTCCACCAAAG
ACATACTTAGTTTGTAAGTACACAGATGTATTGAATCAAGAGTATAACTAAACCCAATGACGCCTCAAATAACGTCAAGAATCTTTTTAACCCAAACGAGTTGGGCATTA
ATTTCTCAAAGGATTTCTGATTCATAGTAGGAAATTGGGAGTGAAACATGAGGCTGAAAAAGGGGTAACAAGAAACGATCATCCACGTGGTTGGCAGCCAAGTGGTCAGT
GTAAGAGAGGATGAAGAACTTGTTTCTCATTGGTCCGAAATCTATCCAACACCCTCCCATTAGATTTCCCCTCAGATTCTCATCTTCATAATTCCTACTTGGCTCCATTT
AAACCCACAATTCAATTCACAATATCTCCCACACATCCTCTTCTTCATCAAATCATATACACACAGTCCAAATACATACCTGAAACTCCCCATCTCAAACGCCATGGCTG
CAACTTCTGGTACTGTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGGTAGCAGAACTCAGACCTTGTTGGCCGGAGCCAGAGGTGGTGTCAATGTTGTCGGCTCT
CGTAAGCTTGTTGTCGTCGCGGCTGCTCAGCCCAAGAAGTCTTGGATCCCTGCTGTTAAGGGTGGCGGCAACTTGATCGACCCAGAATGGCTTGATGGCTCACTTCCAGG
CGACTACGGCTTCGACCCACTAGGGTTGGGGAAGGACCCAGCCTTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAA
TCTTCGTAGGACAAGCGTGGAGTGGGATTCCATGGTTCGAAGCCGGAGCAGATCCAGGCGCAATCGCTCCATTCTCCTTCGGATCACTGCTAGGAACCCAGCTTCTGCTA
ATGGGATGGGTTGAAAGCAAGCGATGGGTGGATTTCTTCAACCCAGAATCTCAAGCGGTGGAATGGGCGACGCCATGGTCGAGAACAGCAGAGAACTTCGCAAATGCAAC
CGGAGAACAAGGGTATCCCGGAGGAAAATTCTTCGATCCATTGGGATTTGCAGGAACTATTAAAGATGGAGTTTACATTCCGGACACGGAGAAATTGGAGAGATTGAAGT
TGGCGGAGATCAAGCATGCTAGAATCGCTATGTTAGCAATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCATTGGGTGCTCTTGGATTGTAA
Protein sequenceShow/hide protein sequence
MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLER
LKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL