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Clc08G07120 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G07120
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:18680139..18685611
RNA-Seq ExpressionClc08G07120
SyntenyClc08G07120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578873.1 hypothetical protein SDJN03_23321, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1046.09Show/hide
Query:  AKSSEPPISLPRRCRLSRVTLSLYLSLSLSVTPGSNLQSAVPDFCAGDCRFQFVTEFLEAFESFRGKAESYILSSFVKIIRITAEDSFHVVRSVQRNFII
        AK SEPPI             SL               S V   C+ +      +EFL AFE FR KAESYILSSFVK IRITAEDSFHVVR ++RNF I
Subjt:  AKSSEPPISLPRRCRLSRVTLSLYLSLSLSVTPGSNLQSAVPDFCAGDCRFQFVTEFLEAFESFRGKAESYILSSFVKIIRITAEDSFHVVRSVQRNFII

Query:  HRLTLPAGENVGGDR
           +   G    GDR
Subjt:  HRLTLPAGENVGGDR
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGGCATCTGGACTATCATGTTTGTGTTTGTGGTATTGTAAGATGCTCTGACATCTGGAGATTCTCGGGAGCAAAATCGTCAGAGCCGCCGATTTCACTTCCGAG
ACGCTGCCGATTAAGTCGCGTTACTCTTTCTCTCTATCTCTCTCTCTCTCTTTCTGTCACACCTGGTTCGAATCTGCAGTCAGCGGTTCCCGATTTTTGCGCAGGAGATT
GCAGATTTCAATTCGTTACGGAGTTTTTGGAAGCGTTTGAGAGTTTCAGAGGAAAAGCTGAAAGTTATATCTTATCGAGTTTCGTGAAGATTATTAGAATAACGGCGGAA
GATTCTTTTCATGTGGTCCGATCAGTTCAAAGAAATTTTATCATCCATAGATTGACCTTACCAGCAGGGGAAAACGTCGGCGGTGATAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGGCATCTGGACTATCATGTTTGTGTTTGTGGTATTGTAAGATGCTCTGACATCTGGAGATTCTCGGGAGCAAAATCGTCAGAGCCGCCGATTTCACTTCCGAG
ACGCTGCCGATTAAGTCGCGTTACTCTTTCTCTCTATCTCTCTCTCTCTCTTTCTGTCACACCTGGTTCGAATCTGCAGTCAGCGGTTCCCGATTTTTGCGCAGGAGATT
GCAGATTTCAATTCGTTACGGAGTTTTTGGAAGCGTTTGAGAGTTTCAGAGGAAAAGCTGAAAGTTATATCTTATCGAGTTTCGTGAAGATTATTAGAATAACGGCGGAA
GATTCTTTTCATGTGGTCCGATCAGTTCAAAGAAATTTTATCATCCATAGATTGACCTTACCAGCAGGGGAAAACGTCGGCGGTGATAGATGA
Protein sequenceShow/hide protein sequence
MGGHLDYHVCVCGIVRCSDIWRFSGAKSSEPPISLPRRCRLSRVTLSLYLSLSLSVTPGSNLQSAVPDFCAGDCRFQFVTEFLEAFESFRGKAESYILSSFVKIIRITAE
DSFHVVRSVQRNFIIHRLTLPAGENVGGDR