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Clc08G07250 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G07250
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:18805651..18806037
RNA-Seq ExpressionClc08G07250
SyntenyClc08G07250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036463.1 putative aquaporin PIP2-5 [Cucumis melo var. makuwa]1.6e-0850Show/hide
Query:  MAVRVKMQMLSLLSYVHLLNCKYIHTQGKRVKRLP-PLIIYLKDEKKFVVTVVSGMHSEATVLSGSERTTKVRKQRQWQVGRRWCPTQPEPLKI
        MAVRVKMQ          +     +T+ K +KRLP PLIIYLK EK+FVVTVVSGMHSE TVLSGSE T     +     G +W    P P+ +
Subjt:  MAVRVKMQMLSLLSYVHLLNCKYIHTQGKRVKRLP-PLIIYLKDEKKFVVTVVSGMHSEATVLSGSERTTKVRKQRQWQVGRRWCPTQPEPLKI
TYK00024.1 putative aquaporin PIP2-5 [Cucumis melo var. makuwa]1.6e-0850Show/hide
Query:  MAVRVKMQMLSLLSYVHLLNCKYIHTQGKRVKRLP-PLIIYLKDEKKFVVTVVSGMHSEATVLSGSERTTKVRKQRQWQVGRRWCPTQPEPLKI
        MAVRVKMQ          +     +T+ K +KRLP PLIIYLK EK+FVVTVVSGMHSE TVLSGSE T     +     G +W    P P+ +
Subjt:  MAVRVKMQMLSLLSYVHLLNCKYIHTQGKRVKRLP-PLIIYLKDEKKFVVTVVSGMHSEATVLSGSERTTKVRKQRQWQVGRRWCPTQPEPLKI
TrEMBL top hitse value%identityAlignment
A0A5A7T0Q3 Putative aquaporin PIP2-57.7e-0950Show/hide
Query:  MAVRVKMQMLSLLSYVHLLNCKYIHTQGKRVKRLP-PLIIYLKDEKKFVVTVVSGMHSEATVLSGSERTTKVRKQRQWQVGRRWCPTQPEPLKI
        MAVRVKMQ          +     +T+ K +KRLP PLIIYLK EK+FVVTVVSGMHSE TVLSGSE T     +     G +W    P P+ +
Subjt:  MAVRVKMQMLSLLSYVHLLNCKYIHTQGKRVKRLP-PLIIYLKDEKKFVVTVVSGMHSEATVLSGSERTTKVRKQRQWQVGRRWCPTQPEPLKI
A0A5D3BL63 Putative aquaporin PIP2-57.7e-0950Show/hide
Query:  MAVRVKMQMLSLLSYVHLLNCKYIHTQGKRVKRLP-PLIIYLKDEKKFVVTVVSGMHSEATVLSGSERTTKVRKQRQWQVGRRWCPTQPEPLKI
        MAVRVKMQ          +     +T+ K +KRLP PLIIYLK EK+FVVTVVSGMHSE TVLSGSE T     +     G +W    P P+ +
Subjt:  MAVRVKMQMLSLLSYVHLLNCKYIHTQGKRVKRLP-PLIIYLKDEKKFVVTVVSGMHSEATVLSGSERTTKVRKQRQWQVGRRWCPTQPEPLKI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGGCCGTAAGAGTAAAGATGCAAATGCTATCACTTCTAAGCTACGTTCATCTATTAAACTGCAAGTACATACATACACAGGGGAAAAGAGTTAAAAGGTTACC
GCCATTGATTATTTATTTGAAGGATGAAAAGAAATTTGTCGTTACTGTAGTAAGTGGTATGCACAGTGAAGCCACTGTTCTGAGTGGGTCAGAACGAACGACAAAGGTAC
GGAAGCAAAGGCAATGGCAAGTGGGTAGGCGGTGGTGCCCAACTCAGCCGGAACCGCTGAAAATCACTGCTCCTTTTCTCTTCTTTACCTTCAATTTCTTCTTCATTAAA
TGCCGCTCTTCGCTTCGCAACATCGCACCACGTTCCTTCATTCAAAGTCTCTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGGCCGTAAGAGTAAAGATGCAAATGCTATCACTTCTAAGCTACGTTCATCTATTAAACTGCAAGTACATACATACACAGGGGAAAAGAGTTAAAAGGTTACC
GCCATTGATTATTTATTTGAAGGATGAAAAGAAATTTGTCGTTACTGTAGTAAGTGGTATGCACAGTGAAGCCACTGTTCTGAGTGGGTCAGAACGAACGACAAAGGTAC
GGAAGCAAAGGCAATGGCAAGTGGGTAGGCGGTGGTGCCCAACTCAGCCGGAACCGCTGAAAATCACTGCTCCTTTTCTCTTCTTTACCTTCAATTTCTTCTTCATTAAA
TGCCGCTCTTCGCTTCGCAACATCGCACCACGTTCCTTCATTCAAAGTCTCTCCTAG
Protein sequenceShow/hide protein sequence
MEMAVRVKMQMLSLLSYVHLLNCKYIHTQGKRVKRLPPLIIYLKDEKKFVVTVVSGMHSEATVLSGSERTTKVRKQRQWQVGRRWCPTQPEPLKITAPFLFFTFNFFFIK
CRSSLRNIAPRSFIQSLS