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Clc08G07355 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G07355
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSAUR-like auxin-responsive protein family
Genome locationClcChr08:18950336..18950659
RNA-Seq ExpressionClc08G07355
SyntenyClc08G07355
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036482.1 auxin-induced protein X15-like [Cucumis melo var. makuwa]2.5e-3977.27Show/hide
Query:  MMEEKPKKGKNLATQILEHAK--WWFCWG-VKEG-KAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANA-SKLYLPCKECVFV
        M+E K KKGKNL +Q++++ K  WW CWG VKEG KA PKDVPKGHFVVYVGE+WKRYVIEIGVL+HPLFKILLDSAEEMFGF N  SKLYLPCKECVFV
Subjt:  MMEEKPKKGKNLATQILEHAK--WWFCWG-VKEG-KAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANA-SKLYLPCKECVFV

Query:  GILQCLDSSS
         ILQC+ SS+
Subjt:  GILQCLDSSS

KGN48091.2 hypothetical protein Csa_004000 [Cucumis sativus]3.6e-3877.27Show/hide
Query:  MMEEKPKKGKNLATQILEHA-KWW-FCWG-VKEG-KAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANA-SKLYLPCKECVFV
        M+E K KKGKNL +Q++++  KWW  CWG VKEG KAIPKDVPKGHFVVYVGE+WKRYVIEIGVL+HPLFKILLDSAEE FGF N  SKLYLPCKECVFV
Subjt:  MMEEKPKKGKNLATQILEHA-KWW-FCWG-VKEG-KAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANA-SKLYLPCKECVFV

Query:  GILQCLDSSS
         ILQC+ SS+
Subjt:  GILQCLDSSS

XP_004149915.1 auxin-induced protein 15A [Cucumis sativus]3.6e-3877.27Show/hide
Query:  MMEEKPKKGKNLATQILEHA-KWW-FCWG-VKEG-KAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANA-SKLYLPCKECVFV
        M+E K KKGKNL +Q++++  KWW  CWG VKEG KAIPKDVPKGHFVVYVGE+WKRYVIEIGVL+HPLFKILLDSAEE FGF N  SKLYLPCKECVFV
Subjt:  MMEEKPKKGKNLATQILEHA-KWW-FCWG-VKEG-KAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANA-SKLYLPCKECVFV

Query:  GILQCLDSSS
         ILQC+ SS+
Subjt:  GILQCLDSSS

XP_022134179.1 indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]4.4e-2866.35Show/hide
Query:  KKGKNLATQILEHAKWW--FC-WGVK----EGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQ
        KK +N A Q L++A  W  +C W +     E KAIP+DVPKGHFVVYVGEE +RYVIEI VLK+P+FK LLDSAEEMFGFAN  KLYLPCKE  FV ILQ
Subjt:  KKGKNLATQILEHAKWW--FC-WGVK----EGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQ

Query:  CLDS
        C+ S
Subjt:  CLDS

XP_022959679.1 auxin-induced protein 15A-like [Cucurbita moschata]4.7e-3066.67Show/hide
Query:  KKGKNLATQILEHAKWWFCWGVK--------EGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGIL
        +K K  ATQ+ ++A  W C G +        E  AIP+DVPKGHFVVYVGEE +RYV+EI +LKHPLFK LLDSAEE+FGF NASKLYLPCKECVFVGIL
Subjt:  KKGKNLATQILEHAKWWFCWGVK--------EGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGIL

Query:  QCLDS
        QC+ S
Subjt:  QCLDS

TrEMBL top hitse value%identityAlignment
A0A0A0KJ86 Uncharacterized protein1.7e-3877.27Show/hide
Query:  MMEEKPKKGKNLATQILEHA-KWW-FCWG-VKEG-KAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANA-SKLYLPCKECVFV
        M+E K KKGKNL +Q++++  KWW  CWG VKEG KAIPKDVPKGHFVVYVGE+WKRYVIEIGVL+HPLFKILLDSAEE FGF N  SKLYLPCKECVFV
Subjt:  MMEEKPKKGKNLATQILEHA-KWW-FCWG-VKEG-KAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANA-SKLYLPCKECVFV

Query:  GILQCLDSSS
         ILQC+ SS+
Subjt:  GILQCLDSSS

A0A0L9TZ85 Uncharacterized protein1.6e-2054.76Show/hide
Query:  QILEHAKWWFCWGVKEGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGIL
        + LEH + +     K    +PKDVPKGH VVYVGE+ KR+VI++G+L HPLF++LLD AE++FGF NASKL++PC E +F+ +L
Subjt:  QILEHAKWWFCWGVKEGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGIL

A0A5D3BLH1 Auxin-induced protein X15-like1.2e-3977.27Show/hide
Query:  MMEEKPKKGKNLATQILEHAK--WWFCWG-VKEG-KAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANA-SKLYLPCKECVFV
        M+E K KKGKNL +Q++++ K  WW CWG VKEG KA PKDVPKGHFVVYVGE+WKRYVIEIGVL+HPLFKILLDSAEEMFGF N  SKLYLPCKECVFV
Subjt:  MMEEKPKKGKNLATQILEHAK--WWFCWG-VKEG-KAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANA-SKLYLPCKECVFV

Query:  GILQCLDSSS
         ILQC+ SS+
Subjt:  GILQCLDSSS

A0A6J1BY27 indole-3-acetic acid-induced protein ARG7-like2.1e-2866.35Show/hide
Query:  KKGKNLATQILEHAKWW--FC-WGVK----EGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQ
        KK +N A Q L++A  W  +C W +     E KAIP+DVPKGHFVVYVGEE +RYVIEI VLK+P+FK LLDSAEEMFGFAN  KLYLPCKE  FV ILQ
Subjt:  KKGKNLATQILEHAKWW--FC-WGVK----EGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQ

Query:  CLDS
        C+ S
Subjt:  CLDS

A0A6J1H8T2 auxin-induced protein 15A-like2.3e-3066.67Show/hide
Query:  KKGKNLATQILEHAKWWFCWGVK--------EGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGIL
        +K K  ATQ+ ++A  W C G +        E  AIP+DVPKGHFVVYVGEE +RYV+EI +LKHPLFK LLDSAEE+FGF NASKLYLPCKECVFVGIL
Subjt:  KKGKNLATQILEHAKWWFCWGVK--------EGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGIL

Query:  QCLDS
        QC+ S
Subjt:  QCLDS

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR501.6e-1255.74Show/hide
Query:  IPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVF
        +P DVPKGHF VYVGE   RY++ I  L HP F+ LL  AEE FGF +   L +PC E VF
Subjt:  IPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVF

P0DKL1 Auxin-responsive protein SAUR507.0e-1344.44Show/hide
Query:  EGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQCL
        +   +P DVPKGHFVVYVGE   RY++ I  L HP F+ LL  +EE FGF +   + +PC+E  F+     +
Subjt:  EGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQCL

P32295 Indole-3-acetic acid-induced protein ARG79.5e-1047.06Show/hide
Query:  DVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFAN-ASKLYLPCKECVFVGILQCLDS
        D PKG+  VYVGE  KR+VI +  L  PLF+ LL  AEE FG+ +    L +PC E +F  I  CL +
Subjt:  DVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFAN-ASKLYLPCKECVFVGILQCLDS

P33081 Auxin-induced protein 15A1.6e-0947.76Show/hide
Query:  DVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFAN-ASKLYLPCKECVFVGILQCLD
        D PKG+  VYVGE+ KR+VI +  L  P F+ LL  AEE FG+ +    L +PC E VF  I  CL+
Subjt:  DVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFAN-ASKLYLPCKECVFVGILQCLD

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 102.5e-1047.69Show/hide
Query:  IPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGIL
        +P+DVPKGHF VYVG    RY++ I  L H  F+ LL  AEE FGF +   L +PC E  F  ++
Subjt:  IPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGIL

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family5.0e-1449.28Show/hide
Query:  EGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGIL
        +G ++P DVPKGHFVVYVG    RYV+ I  L  P F++LL  AEE FGF +   L +PC+E  F  ++
Subjt:  EGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGIL

AT2G21220.1 SAUR-like auxin-responsive protein family1.0e-1457.38Show/hide
Query:  IPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVF
        +P DVPKGHF VYVGE+  RY++ I  L HP FK LL  AEE FGF +   L +PC+E VF
Subjt:  IPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVF

AT2G37030.1 SAUR-like auxin-responsive protein family1.0e-2255.84Show/hide
Query:  CWGV-KEGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQC
        CW   KE + IP+DVPKGH VVYVGEE+KR+VI I +LKHPLF+ LLD A++ +GF+  S+L++PC E  F+ +++C
Subjt:  CWGV-KEGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQC

AT3G53250.1 SAUR-like auxin-responsive protein family4.0e-1951.32Show/hide
Query:  WGV-KEGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQC
        WG  KE +AIPKDVP+GH VVYVG+++KR+VI++ +L HP+FK LLD A++ +   N+S+L++PC E  F+ +++C
Subjt:  WGV-KEGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQC

AT5G20810.1 SAUR-like auxin-responsive protein family5.0e-1445.71Show/hide
Query:  PKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQCLDSS
        P DVPKG+  VYVG E +R++I    L H LFK+LL+ AEE FGF  +  L +PC+   F  +L+C++++
Subjt:  PKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQCLDSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGAAAAACCGAAGAAGGGAAAAAATTTAGCAACTCAAATTTTAGAGCATGCAAAGTGGTGGTTTTGTTGGGGTGTGAAAGAAGGAAAAGCAATTCCTAAAGA
TGTTCCAAAGGGTCATTTTGTAGTGTATGTGGGTGAAGAATGGAAGAGATATGTTATTGAGATTGGAGTGTTGAAACATCCTTTGTTTAAGATATTACTTGATTCTGCTG
AGGAAATGTTTGGATTTGCTAATGCTTCAAAACTATATTTACCTTGTAAGGAGTGTGTTTTTGTTGGAATTCTTCAATGTCTAGATTCTTCTTCTTCTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAGAAAAACCGAAGAAGGGAAAAAATTTAGCAACTCAAATTTTAGAGCATGCAAAGTGGTGGTTTTGTTGGGGTGTGAAAGAAGGAAAAGCAATTCCTAAAGA
TGTTCCAAAGGGTCATTTTGTAGTGTATGTGGGTGAAGAATGGAAGAGATATGTTATTGAGATTGGAGTGTTGAAACATCCTTTGTTTAAGATATTACTTGATTCTGCTG
AGGAAATGTTTGGATTTGCTAATGCTTCAAAACTATATTTACCTTGTAAGGAGTGTGTTTTTGTTGGAATTCTTCAATGTCTAGATTCTTCTTCTTCTTTGTAG
Protein sequenceShow/hide protein sequence
MMEEKPKKGKNLATQILEHAKWWFCWGVKEGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQCLDSSSSL