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Clc08G07700 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G07700
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncyclin-dependent protein kinase inhibitor SMR1-like
Genome locationClcChr08:19271764..19272147
RNA-Seq ExpressionClc08G07700
SyntenyClc08G07700
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456553.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo]1.7e-5591.2Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNI  S     SDHDSD+DRR+CRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLESSTTAPPKRTCCR
        VDNFFRSAYDLESS+TAPPKR CCR
Subjt:  VDNFFRSAYDLESSTTAPPKRTCCR

XP_011649858.1 cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus]2.2e-5591.2Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNI  S     SDHDSD+DRR+CRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLESSTTAPPKRTCCR
        VDNFFRSAYDLESS TAPPKR+CCR
Subjt:  VDNFFRSAYDLESSTTAPPKRTCCR

XP_022990487.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]1.5e-5184.38Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHD-SDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFP+NLPKIRLPLQVRSPPKPS S NIPS    S SDHD +D+D R CRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHD-SDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLESSTTAPPKRTCCRSA
        EVDNFFRSAYDLE+S+ APPKR+CCRSA
Subjt:  EVDNFFRSAYDLESSTTAPPKRTCCRSA

XP_023521119.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]3.9e-5285.16Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHD-SDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFP+NLPKIRLPLQVRSPPKPS S NIPS    S SDHD +D+D R CRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHD-SDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLESSTTAPPKRTCCRSA
        EVDNFFRSAYDLE+S+TAPPKR+CCRSA
Subjt:  EVDNFFRSAYDLESSTTAPPKRTCCRSA

XP_038884240.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]1.8e-5792.86Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPS    SASD DSD+DRR+CRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLESSTTAPPKRTCCRS
        VDNFFRSAYDLE+S+TAPPKRTCCRS
Subjt:  VDNFFRSAYDLESSTTAPPKRTCCRS

TrEMBL top hitse value%identityAlignment
A0A0A0LSQ6 Uncharacterized protein1.1e-5591.2Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNI  S     SDHDSD+DRR+CRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLESSTTAPPKRTCCR
        VDNFFRSAYDLESS TAPPKR+CCR
Subjt:  VDNFFRSAYDLESSTTAPPKRTCCR

A0A1S3C3L4 cyclin-dependent protein kinase inhibitor SMR1-like8.3e-5691.2Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNI  S     SDHDSD+DRR+CRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLESSTTAPPKRTCCR
        VDNFFRSAYDLESS+TAPPKR CCR
Subjt:  VDNFFRSAYDLESSTTAPPKRTCCR

A0A5A7UMQ0 Cyclin-dependent protein kinase inhibitor SMR1-like8.3e-5691.2Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
        MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNI  S     SDHDSD+DRR+CRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEE

Query:  VDNFFRSAYDLESSTTAPPKRTCCR
        VDNFFRSAYDLESS+TAPPKR CCR
Subjt:  VDNFFRSAYDLESSTTAPPKRTCCR

A0A6J1E540 cyclin-dependent protein kinase inhibitor SMR1-like1.6e-5184.38Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHD-SDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFP+NLPKIRLPLQVRSPPKPS S NIPS    S SDHD +D+D R CRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHD-SDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLESSTTAPPKRTCCRSA
        EVDNFFRSAYDLE+S+TAP KR+CCRSA
Subjt:  EVDNFFRSAYDLESSTTAPPKRTCCRSA

A0A6J1JIW3 cyclin-dependent protein kinase inhibitor SMR1-like7.3e-5284.38Show/hide
Query:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHD-SDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQE
        MSMDLEFP+NLPKIRLPLQVRSPPKPS S NIPS    S SDHD +D+D R CRTPTSAEHKIPKI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQE
Subjt:  MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHD-SDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQE

Query:  EVDNFFRSAYDLESSTTAPPKRTCCRSA
        EVDNFFRSAYDLE+S+ APPKR+CCRSA
Subjt:  EVDNFFRSAYDLESSTTAPPKRTCCRSA

SwissProt top hitse value%identityAlignment
Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR13.3e-0937.78Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKIL-SCPGAPKKPKRPPV-----------PCKRKL---T
        MDLE  ++L K   P  ++   K S              + D D D   C TPTS EHKIP ++ S P  P+KP+ PP             CKRKL   T
Subjt:  MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKIL-SCPGAPKKPKRPPV-----------PCKRKL---T

Query:  MELKFFEIVNQEEVDNFFRSAYDLESSTTAPPKRT
         E+    I+N+EE+D FF S Y+ E+STTA  +R+
Subjt:  MELKFFEIVNQEEVDNFFRSAYDLESSTTAPPKRT

Q9LZ78 Cyclin-dependent protein kinase inhibitor SIM1.2e-0639.8Show/hide
Query:  NIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IVNQEEVDNFFRSAYD--LESSTT
        N P +    A+ +  D D   C TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  +E IVN++E++ FF S Y+  + SSTT
Subjt:  NIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IVNQEEVDNFFRSAYD--LESSTT

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein8.6e-0541.82Show/hide
Query:  TPTSAEHKIPKILSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF
        TPTS++HKIP++ +CP  P K+P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  TPTSAEHKIPKILSCPGAP-KKPKRPPVPCKRKLTMELKFFEI--VNQEEVDNFF

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS2.3e-1037.78Show/hide
Query:  MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKIL-SCPGAPKKPKRPPV-----------PCKRKL---T
        MDLE  ++L K   P  ++   K S              + D D D   C TPTS EHKIP ++ S P  P+KP+ PP             CKRKL   T
Subjt:  MDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKIL-SCPGAPKKPKRPPV-----------PCKRKL---T

Query:  MELKFFEIVNQEEVDNFFRSAYDLESSTTAPPKRT
         E+    I+N+EE+D FF S Y+ E+STTA  +R+
Subjt:  MELKFFEIVNQEEVDNFFRSAYDLESSTTAPPKRT

AT5G02420.1 unknown protein9.5e-0438.2Show/hide
Query:  QVRSPPKPSLSDNIPSSASASASDHDSDI--DRRACRTPTSAEHKIP--KILSCPGAPKKPK-RPPVPCKRKLTMELKFFEIVNQEEVD
        ++R P +P L  +IP       SDH+     +   C+TPTS++HKIP  K   CP AP+KPK       KRKLT       +VN+  +D
Subjt:  QVRSPPKPSLSDNIPSSASASASDHDSDI--DRRACRTPTSAEHKIP--KILSCPGAPKKPK-RPPVPCKRKLTMELKFFEIVNQEEVD

AT5G04470.1 cyclin-dependent protein kinase inhibitors8.3e-0839.8Show/hide
Query:  NIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IVNQEEVDNFFRSAYD--LESSTT
        N P +    A+ +  D D   C TPTS++HKIP   +   P  P+KP+ P  P       CKRKL   L  +E IVN++E++ FF S Y+  + SSTT
Subjt:  NIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSC--PGAPKKPKRPPVP-------CKRKLTMELKFFE-IVNQEEVDNFFRSAYD--LESSTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTCCCTTTACAAGTCCGATCCCCTCCCAAACCCTCCCTTTCCGACAACATACCTTCTTCCGCCTC
CGCCTCCGCCTCCGATCACGACTCCGACATCGACCGCCGCGCCTGCCGGACACCCACCTCCGCCGAACACAAGATTCCCAAGATCCTCAGCTGTCCTGGCGCTCCCAAGA
AGCCTAAACGCCCCCCAGTCCCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTCGAGATCGTCAATCAAGAAGAGGTCGATAATTTCTTCCGATCCGCTTACGAT
CTTGAATCTTCTACCACAGCGCCGCCGAAGAGGACCTGCTGCCGGTCAGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATGGACCTTGAATTCCCCAAAAATCTCCCCAAAATCCGCCTCCCTTTACAAGTCCGATCCCCTCCCAAACCCTCCCTTTCCGACAACATACCTTCTTCCGCCTC
CGCCTCCGCCTCCGATCACGACTCCGACATCGACCGCCGCGCCTGCCGGACACCCACCTCCGCCGAACACAAGATTCCCAAGATCCTCAGCTGTCCTGGCGCTCCCAAGA
AGCCTAAACGCCCCCCAGTCCCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTCGAGATCGTCAATCAAGAAGAGGTCGATAATTTCTTCCGATCCGCTTACGAT
CTTGAATCTTCTACCACAGCGCCGCCGAAGAGGACCTGCTGCCGGTCAGCCTGA
Protein sequenceShow/hide protein sequence
MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIPSSASASASDHDSDIDRRACRTPTSAEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYD
LESSTTAPPKRTCCRSA