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Clc08G07820 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G07820
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionExocyst complex component Sec6
Genome locationClcChr08:19387036..19387626
RNA-Seq ExpressionClc08G07820
SyntenyClc08G07820
Gene Ontology termsGO:0006887 - exocytosis (biological process)
GO:0000145 - exocyst (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031669.1 exocyst complex component SEC6 [Cucumis melo var. makuwa]7.2e-0680.95Show/hide
Query:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        +MVEDLGIEAKEA VREVAKLLP+ E L+S ISSIK DYITR
Subjt:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
XP_004140937.1 exocyst complex component SEC6 [Cucumis sativus]7.2e-0680.95Show/hide
Query:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        +MVEDLGIEAKEA VREVAKLLP+ E L+S ISSIK DYITR
Subjt:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
XP_022962419.1 exocyst complex component SEC6 [Cucurbita moschata]7.2e-0680.95Show/hide
Query:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        +MVEDLGIEAKEA VREVAKLLP+ E L+S ISSIK DYITR
Subjt:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
XP_022990251.1 exocyst complex component SEC6 [Cucurbita maxima]7.2e-0680.95Show/hide
Query:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        +MVEDLGIEAKEA VREVAKLLP+ E L+S ISSIK DYITR
Subjt:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
XP_023540057.1 exocyst complex component SEC6 [Cucurbita pepo subsp. pepo]7.2e-0680.95Show/hide
Query:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        +MVEDLGIEAKEA VREVAKLLP+ E L+S ISSIK DYITR
Subjt:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
TrEMBL top hitse value%identityAlignment
A0A0A0K9G1 Exocyst complex component Sec61.1e-0769.09Show/hide
Query:  FHRQTIFFYK-CEVMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        FH   +F    C++MVEDLGIEAKEA VREVAKLLP+ E L+S ISSIK DYITR
Subjt:  FHRQTIFFYK-CEVMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
A0A251TEZ8 Exocyst complex component Sec61.9e-0764.41Show/hide
Query:  HASFHRQTI--FFYKCEVMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        H+ F+R  +  F  KC++MVEDLGIEAKE+ VREVAKLLP+ E L S ISSIK DYI R
Subjt:  HASFHRQTI--FFYKCEVMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
A0A5A7SQX3 Exocyst complex component Sec63.5e-0680.95Show/hide
Query:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        +MVEDLGIEAKEA VREVAKLLP+ E L+S ISSIK DYITR
Subjt:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
A0A5D3BZV5 Exocyst complex component Sec63.5e-0680.95Show/hide
Query:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        +MVEDLGIEAKEA VREVAKLLP+ E L+S ISSIK DYITR
Subjt:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
A0A6J1JMF6 Exocyst complex component Sec63.5e-0680.95Show/hide
Query:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        +MVEDLGIEAKEA VREVAKLLP+ E L+S ISSIK DYITR
Subjt:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
SwissProt top hitse value%identityAlignment
Q94AI6 Exocyst complex component SEC64.7e-0876.19Show/hide
Query:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        +MVEDLG+EAKEA VREVAKLLP+ E L+S ISSIK DYI R
Subjt:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
Arabidopsis top hitse value%identityAlignment
AT1G71820.1 SEC63.3e-0976.19Show/hide
Query:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        +MVEDLG+EAKEA VREVAKLLP+ E L+S ISSIK DYI R
Subjt:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
AT1G71820.2 SEC63.3e-0976.19Show/hide
Query:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR
        +MVEDLG+EAKEA VREVAKLLP+ E L+S ISSIK DYI R
Subjt:  VMVEDLGIEAKEAVVREVAKLLPVSEFLRSIISSIKVDYITR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCATCTTCTTCAGTTTCCTTCTCTTCGAACCCAAGTTCGTTTGAATCACTCCTCCATTTTAGAGGCTAATGGAAATAGATTTTACCCTCAATATAATATA
GAATACATCAACTCCATAAGGCATCTGAAGCTGCTGCAAGTGTGGTTCCGCCGCCGCCCTTCAACGATCCAAGACGGACAGTGCTTCCGCCCTTCCGCCGCCCAC
GCTTCTTTTCACCGTCAAACCATTTTTTTCTATAAATGCGAGGTGATGGTTGAGGATCTTGGTATTGAAGCAAAGGAAGCAGTCGTACGTGAGGTTGCCAAGCTT
CTACCAGTTTCGGAGTTTCTGCGTTCAATTATTAGTTCGATCAAGGTTGATTACATTACTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCATCTTCTTCAGTTTCCTTCTCTTCGAACCCAAGTTCGTTTGAATCACTCCTCCATTTTAGAGGCTAATGGAAATAGATTTTACCCTCAATATAATATA
GAATACATCAACTCCATAAGGCATCTGAAGCTGCTGCAAGTGTGGTTCCGCCGCCGCCCTTCAACGATCCAAGACGGACAGTGCTTCCGCCCTTCCGCCGCCCAC
GCTTCTTTTCACCGTCAAACCATTTTTTTCTATAAATGCGAGGTGATGGTTGAGGATCTTGGTATTGAAGCAAAGGAAGCAGTCGTACGTGAGGTTGCCAAGCTT
CTACCAGTTTCGGAGTTTCTGCGTTCAATTATTAGTTCGATCAAGGTTGATTACATTACTCGTTAG
Protein sequenceShow/hide protein sequence
MVHLLQFPSLRTQVRLNHSSILEANGNRFYPQYNIEYINSIRHLKLLQVWFRRRPSTIQDGQCFRPSAAHASFHRQTIFFYKCEVMVEDLGIEAKEAVVREVAKL
LPVSEFLRSIISSIKVDYITR