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Clc08G07830 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G07830
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionExocyst complex component Sec6
Genome locationClcChr08:19387349..19393023
RNA-Seq ExpressionClc08G07830
SyntenyClc08G07830
Gene Ontology termsGO:0006887 - exocytosis (biological process)
GO:0000145 - exocyst (cellular component)
InterPro domainsIPR010326 - Exocyst complex component EXOC3/Sec6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KZM99469.1 hypothetical protein DCAR_013169 [Daucus carota subsp. sativus]3.9e-3569.5Show/hide
Query:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ---------------------------DVEGMMPISVEAVEAR
        MMVEDL IEAKEAAVREVAKLL + ELLQS I+SIKADY+TRQQANDA LSTMVAEQ                           DVEGMM ISVEA EAR
Subjt:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ---------------------------DVEGMMPISVEAVEAR

Query:  DSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR
        DSLSDD ELI+TYERLTALDGKRR ALAAA+SHKE+VG+LR
Subjt:  DSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR

KZM99469.1 hypothetical protein DCAR_013169 [Daucus carota subsp. sativus]3.6e-1261.64Show/hide
Query:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK
        C  +NNNLRCYDLAMELS+S  E+LP NYAEQ               E VH TVSVIFEDPGVQELLV LY +
Subjt:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK

KZM99469.1 hypothetical protein DCAR_013169 [Daucus carota subsp. sativus]8.8e-3560.34Show/hide
Query:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-------------------------------------------
        MMVEDLGIEAKEAAVREVAKLLP+ ELLQS ISSIKADYITRQQANDA LSTMVAEQ                                           
Subjt:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-------------------------------------------

Query:  -----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR
                         DVEGMM ISVEA EARDSLSDD ELINTYERLTALDGKRR ALAAAASHKE+VGRLR
Subjt:  -----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR

OMP01169.1 hypothetical protein COLO4_12104 [Corchorus olitorius]4.8e-4140.16Show/hide
Query:  MVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ--------------------------------------------
        MVEDLG+EAKEAAVREVAKLLP+ ELLQS IS+IKADYITRQQANDA LSTMVAEQ                                            
Subjt:  MVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ--------------------------------------------

Query:  ----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRL---------------RYLSQ--------
                        DVEGMM ISVEA EARDSLSDD E++NTYERLTALDGKRR ALAA ASHKE+V +L                 L Q        
Subjt:  ----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRL---------------RYLSQ--------

Query:  ---GFIIFSILKP---------------NLMLLLL--------DKCLQ----------------------------------------------------
           G  + S+  P               NL    L        DKC +                                                    
Subjt:  ---GFIIFSILKP---------------NLMLLLL--------DKCLQ----------------------------------------------------

Query:  ------VNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK
              +NNNLRCYDLAMELSN I EALPQNY +Q               E VH TV+VIFEDPGVQELLV LY +
Subjt:  ------VNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK

PKU76265.1 hypothetical protein MA16_Dca015585 [Dendrobium catenatum]4.6e-3681.42Show/hide
Query:  MVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQDVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALA
        ++EDLGIEAK+AAVREVAKLLP+ ELL SI+ SIKADY +RQQANDA LSTMVAEQDV GMM ISVEA  ARDSL DD ELI+TYERLTALDGKRR ALA
Subjt:  MVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQDVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALA

Query:  AAASHKEKVGRLR
        AA SHKE+VGRLR
Subjt:  AAASHKEKVGRLR

XP_004140937.1 exocyst complex component SEC6 [Cucumis sativus]5.0e-1467.12Show/hide
Query:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK
        C  +NNNLRCYDLAMELS S  EALPQNYAEQ               E VH TVSVIFEDPGVQELLV LYQK
Subjt:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK

XP_004140937.1 exocyst complex component SEC6 [Cucumis sativus]8.8e-3560.34Show/hide
Query:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-------------------------------------------
        MMVEDLGIEAKEAAVREVAKLLP+ ELLQS ISSIKADYITRQQANDA LSTMVAEQ                                           
Subjt:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-------------------------------------------

Query:  -----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR
                         DVEGMM ISVEA EARDSLSDD ELINTYERLTALDGKRR ALAAAASHKE+VGRLR
Subjt:  -----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR

TrEMBL top hitse value%identityAlignment
A0A0A0K9G1 Exocyst complex component Sec61.0e-3660.8Show/hide
Query:  CKMMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-----------------------------------------
        CKMMVEDLGIEAKEAAVREVAKLLP+ ELLQS ISSIKADYITRQQANDA LSTMVAEQ                                         
Subjt:  CKMMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-----------------------------------------

Query:  -------------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR
                           DVEGMM ISVEA EARDSLSDD ELINTYERLTALDGKRR ALAAAASHKE+VGRLR
Subjt:  -------------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR

A0A0A0K9G1 Exocyst complex component Sec62.4e-1467.12Show/hide
Query:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK
        C  +NNNLRCYDLAMELS S  EALPQNYAEQ               E VH TVSVIFEDPGVQELLV LYQK
Subjt:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK

A0A0A0K9G1 Exocyst complex component Sec62.2e-3681.42Show/hide
Query:  MVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQDVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALA
        ++EDLGIEAK+AAVREVAKLLP+ ELL SI+ SIKADY +RQQANDA LSTMVAEQDV GMM ISVEA  ARDSL DD ELI+TYERLTALDGKRR ALA
Subjt:  MVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQDVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALA

Query:  AAASHKEKVGRLR
        AA SHKE+VGRLR
Subjt:  AAASHKEKVGRLR

A0A165Z0L4 Exocyst complex component Sec61.9e-3569.5Show/hide
Query:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ---------------------------DVEGMMPISVEAVEAR
        MMVEDL IEAKEAAVREVAKLL + ELLQS I+SIKADY+TRQQANDA LSTMVAEQ                           DVEGMM ISVEA EAR
Subjt:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ---------------------------DVEGMMPISVEAVEAR

Query:  DSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR
        DSLSDD ELI+TYERLTALDGKRR ALAAA+SHKE+VG+LR
Subjt:  DSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR

A0A165Z0L4 Exocyst complex component Sec61.7e-1261.64Show/hide
Query:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK
        C  +NNNLRCYDLAMELS+S  E+LP NYAEQ               E VH TVSVIFEDPGVQELLV LY +
Subjt:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK

A0A165Z0L4 Exocyst complex component Sec64.2e-3560.34Show/hide
Query:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-------------------------------------------
        MMVEDLGIEAKEAAVREVAKLLP+ ELLQS ISSIKADYITRQQANDA LSTMVAEQ                                           
Subjt:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-------------------------------------------

Query:  -----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR
                         DVEGMM ISVEA EARDSLSDD ELINTYERLTALDGKRR ALAAAASHKE+VGRLR
Subjt:  -----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR

A0A1R3K251 Uncharacterized protein2.3e-4140.16Show/hide
Query:  MVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ--------------------------------------------
        MVEDLG+EAKEAAVREVAKLLP+ ELLQS IS+IKADYITRQQANDA LSTMVAEQ                                            
Subjt:  MVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ--------------------------------------------

Query:  ----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRL---------------RYLSQ--------
                        DVEGMM ISVEA EARDSLSDD E++NTYERLTALDGKRR ALAA ASHKE+V +L                 L Q        
Subjt:  ----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRL---------------RYLSQ--------

Query:  ---GFIIFSILKP---------------NLMLLLL--------DKCLQ----------------------------------------------------
           G  + S+  P               NL    L        DKC +                                                    
Subjt:  ---GFIIFSILKP---------------NLMLLLL--------DKCLQ----------------------------------------------------

Query:  ------VNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK
              +NNNLRCYDLAMELSN I EALPQNY +Q               E VH TV+VIFEDPGVQELLV LY +
Subjt:  ------VNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK

A0A5D3BZV5 Exocyst complex component Sec61.4e-1467.12Show/hide
Query:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK
        C  +NNNLRCYDLAMELS S  EALPQNYAEQ               E VH TVSVIFEDPGVQELLV LYQK
Subjt:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK

SwissProt top hitse value%identityAlignment
Q94AI6 Exocyst complex component SEC67.2e-3255.17Show/hide
Query:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-------------------------------------------
        MMVEDLG+EAKEAAVREVAKLLP+ ELLQS ISSIKADYI RQQANDA LSTMVAEQ                                           
Subjt:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-------------------------------------------

Query:  -----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR
                         DVEGMM ISVEA  ARDSLSDD E++NTYERLTALDGKRR ALAAA    E+VGRLR
Subjt:  -----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR

Q94AI6 Exocyst complex component SEC65.0e-1767.12Show/hide
Query:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK
        C  +NNNLRCYDLAMELSNS  EALPQNYAEQ               E VH TV VIFEDPGVQELLV LYQK
Subjt:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK

Arabidopsis top hitse value%identityAlignment
AT1G71820.1 SEC65.1e-3355.17Show/hide
Query:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-------------------------------------------
        MMVEDLG+EAKEAAVREVAKLLP+ ELLQS ISSIKADYI RQQANDA LSTMVAEQ                                           
Subjt:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-------------------------------------------

Query:  -----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR
                         DVEGMM ISVEA  ARDSLSDD E++NTYERLTALDGKRR ALAAA    E+VGRLR
Subjt:  -----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR

AT1G71820.1 SEC63.6e-1867.12Show/hide
Query:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK
        C  +NNNLRCYDLAMELSNS  EALPQNYAEQ               E VH TV VIFEDPGVQELLV LYQK
Subjt:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK

AT1G71820.2 SEC65.1e-3355.17Show/hide
Query:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-------------------------------------------
        MMVEDLG+EAKEAAVREVAKLLP+ ELLQS ISSIKADYI RQQANDA LSTMVAEQ                                           
Subjt:  MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ-------------------------------------------

Query:  -----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR
                         DVEGMM ISVEA  ARDSLSDD E++NTYERLTALDGKRR ALAAA    E+VGRLR
Subjt:  -----------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR

AT1G71820.2 SEC63.6e-1867.12Show/hide
Query:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK
        C  +NNNLRCYDLAMELSNS  EALPQNYAEQ               E VH TV VIFEDPGVQELLV LYQK
Subjt:  CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFEDPGVQELLVLLYQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTATACTCCCACTTGCAAGATGATGGTTGAGGATCTCGGTATCGAAGCAAAGGAAGCAGCTGTACGCGAGGTTGCCAAGCTTCTACCGATTTTGGAGCTTCTGCA
GTCAATTATTAGTTCGATCAAGGCTGATTACATTACTCGTCAGCAGGCAAATGATGCACATCTCAGTACAATGGTTGCAGAGCAGGATGTTGAGGGCATGATGCCCATAT
CTGTTGAAGCAGTTGAGGCGCGTGATTCTTTGAGTGATGATTCAGAGCTTATAAACACTTATGAGAGGCTAACCGCACTTGATGGAAAACGGAGGTCTGCTTTAGCAGCT
GCAGCATCTCACAAAGAAAAGGTTGGAAGACTAAGGTATTTGTCCCAAGGATTTATTATATTTTCAATACTCAAACCGAACCTCATGCTTTTACTACTTGATAAATGTCT
ACAGGTTAACAACAACTTGCGTTGCTATGATCTTGCTATGGAGCTAAGTAATAGCATAACAGAAGCGCTCCCTCAGAATTATGCTGAACAGGAAGTTGTGCATTGTACGG
TCAGTGTCATTTTTGAGGATCCTGGAGTGCAGGAGTTACTTGTCCTGCTTTATCAGAAGGGTAACATTCCTTCTCTCTTTGTTGTAATCCTCTGTAAGTTGCGCAGTTTC
TGTGTTGTAGTCAGTTTGAAGCATATATTGTTTAAGATCATACACCAAGCCAAGAATGTGAAGGCTGTTAGGAATTTTGTGCCTTCCCCAGACTGGGAATGGTAG
mRNA sequenceShow/hide mRNA sequence
CAAAATTGTCAATTGAGGCATCTATATACAACTTTATAGAAAAAAATGGTTTGACGGTGAAAAGAAGCGTGGGCGGCGGAAGGGCGGAAGCACTGTCCGTCTTGGATCGT
TGAAGGGCGGCGGCGGAACCACACTTGCAGCAGCTTCAGATGCCTTATGGAGTTGATGTATTCTATATTATATTGAGGGTAAAATCTATTTCCATTAGCCTCTAAAATGG
AGGAGTGATTCAAACGAACTTGGGTTCGAAGAGAAGGAAACTGAAGAAGATGAACCATAGCCAACAAGCGATAAGAGCAGGCATGAGGATGACAAAACGCTCTCCGAGTT
TCAAGCATCTATAATGGAGTATACTCCCACTTGCAAGATGATGGTTGAGGATCTCGGTATCGAAGCAAAGGAAGCAGCTGTACGCGAGGTTGCCAAGCTTCTACCGATTT
TGGAGCTTCTGCAGTCAATTATTAGTTCGATCAAGGCTGATTACATTACTCGTCAGCAGGCAAATGATGCACATCTCAGTACAATGGTTGCAGAGCAGGATGTTGAGGGC
ATGATGCCCATATCTGTTGAAGCAGTTGAGGCGCGTGATTCTTTGAGTGATGATTCAGAGCTTATAAACACTTATGAGAGGCTAACCGCACTTGATGGAAAACGGAGGTC
TGCTTTAGCAGCTGCAGCATCTCACAAAGAAAAGGTTGGAAGACTAAGGTATTTGTCCCAAGGATTTATTATATTTTCAATACTCAAACCGAACCTCATGCTTTTACTAC
TTGATAAATGTCTACAGGTTAACAACAACTTGCGTTGCTATGATCTTGCTATGGAGCTAAGTAATAGCATAACAGAAGCGCTCCCTCAGAATTATGCTGAACAGGAAGTT
GTGCATTGTACGGTCAGTGTCATTTTTGAGGATCCTGGAGTGCAGGAGTTACTTGTCCTGCTTTATCAGAAGGGTAACATTCCTTCTCTCTTTGTTGTAATCCTCTGTAA
GTTGCGCAGTTTCTGTGTTGTAGTCAGTTTGAAGCATATATTGTTTAAGATCATACACCAAGCCAAGAATGTGAAGGCTGTTAGGAATTTTGTGCCTTCCCCAGACTGGG
AATGGTAG
Protein sequenceShow/hide protein sequence
MEYTPTCKMMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQDVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAA
AASHKEKVGRLRYLSQGFIIFSILKPNLMLLLLDKCLQVNNNLRCYDLAMELSNSITEALPQNYAEQEVVHCTVSVIFEDPGVQELLVLLYQKGNIPSLFVVILCKLRSF
CVVVSLKHILFKIIHQAKNVKAVRNFVPSPDWEW