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Clc08G08020 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G08020
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionalpha/beta-Hydrolases superfamily protein
Genome locationClcChr08:19522528..19522770
RNA-Seq ExpressionClc08G08020
SyntenyClc08G08020
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR029058 - Alpha/Beta hydrolase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022958610.1 uncharacterized protein LOC111459783 isoform X1 [Cucurbita moschata]4.3e-3687.5Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ
        M+GFGKWEFDPMLLENIFP+NEGSVHLWQGD+DKLVPVKLQRYI QKLPWIHYHEL+GAGH+F FT K+SEEIVRSLL Q
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ

XP_022958626.1 uncharacterized protein LOC111459783 isoform X2 [Cucurbita moschata]4.3e-3687.5Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ
        M+GFGKWEFDPMLLENIFP+NEGSVHLWQGD+DKLVPVKLQRYI QKLPWIHYHEL+GAGH+F FT K+SEEIVRSLL Q
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ

XP_022990400.1 uncharacterized protein LOC111487269 isoform X2 [Cucurbita maxima]5.6e-3686.25Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ
        M+GFGKWEFDPMLLENIFP+NEGS+HLWQGD+DKLVPVKLQRYIAQKLPWIHYHEL+GAGH+F  T K+SEEIVRSLL+Q
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ

XP_023517804.1 uncharacterized protein LOC111781448 isoform X1 [Cucurbita pepo subsp. pepo]4.3e-3687.5Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ
        M+GFGKWEFDPMLLENIFP+NEGSVHLWQGD+DKLVPVKLQRYIAQKLPWIHYHEL+GAGH+F  T K+SEEIVRSLL+Q
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ

XP_023517822.1 uncharacterized protein LOC111781448 isoform X2 [Cucurbita pepo subsp. pepo]4.3e-3687.5Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ
        M+GFGKWEFDPMLLENIFP+NEGSVHLWQGD+DKLVPVKLQRYIAQKLPWIHYHEL+GAGH+F  T K+SEEIVRSLL+Q
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ

TrEMBL top hitse value%identityAlignment
A0A1S3C2M4 uncharacterized protein LOC103495960 isoform X41.3e-3586.25Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ
        M+GFGKWEFDPMLLENIF +NEGSVHLW GD+DKLVPVKLQRYIAQKLPWIHYHEL GAGH+FAFT K+SEEI+RS+LLQ
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ

A0A6J1H2K8 uncharacterized protein LOC111459783 isoform X22.1e-3687.5Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ
        M+GFGKWEFDPMLLENIFP+NEGSVHLWQGD+DKLVPVKLQRYI QKLPWIHYHEL+GAGH+F FT K+SEEIVRSLL Q
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ

A0A6J1H3Z6 uncharacterized protein LOC111459783 isoform X12.1e-3687.5Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ
        M+GFGKWEFDPMLLENIFP+NEGSVHLWQGD+DKLVPVKLQRYI QKLPWIHYHEL+GAGH+F FT K+SEEIVRSLL Q
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ

A0A6J1JQ03 uncharacterized protein LOC111487269 isoform X22.7e-3686.25Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ
        M+GFGKWEFDPMLLENIFP+NEGS+HLWQGD+DKLVPVKLQRYIAQKLPWIHYHEL+GAGH+F  T K+SEEIVRSLL+Q
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ

A0A6J1JRY2 uncharacterized protein LOC111487269 isoform X12.7e-3686.25Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ
        M+GFGKWEFDPMLLENIFP+NEGS+HLWQGD+DKLVPVKLQRYIAQKLPWIHYHEL+GAGH+F  T K+SEEIVRSLL+Q
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G74280.1 alpha/beta-Hydrolases superfamily protein3.9e-2761.54Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLL
        ++GFG WEF P+ LEN F   EGSVHLWQGDED LVP KLQRY+A +LPW+HYHE+  +GH F +T  + ++IV+SLL
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLL

AT1G74290.1 alpha/beta-Hydrolases superfamily protein1.7e-2762.82Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLL
        ++GFG WEFDP+ L+N F  NEG VHLWQGDED LVPVKLQRY+A +LPW+HYHE+  +GH F FT  + + IV +LL
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLL

AT1G74300.1 alpha/beta-Hydrolases superfamily protein2.0e-2865.38Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLL
        ++GFG WEFDP+ LEN F   EGSVHLWQGDED LVPV LQRYIA KLPW+HYHE+AG GH F     + +EIV++ L
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLL

AT2G36290.1 alpha/beta-Hydrolases superfamily protein2.0e-3170.51Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLL
        ++GFG WEFDPM LEN+FP NEGSVHLWQGD+D LVPV LQRYIA+KLPWIHYHE+ GAGH+F F   +   IV++LL
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLL

AT3G54240.1 alpha/beta-Hydrolases superfamily protein3.5e-2862.82Show/hide
Query:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLL
        ++GFGKW FDPM +EN FP+ EGSVH+WQGD+D+LVP++LQR IAQKL WI YHE+ GAGHIF     ++E I++ LL
Subjt:  MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGGTTTGGGAAATGGGAATTTGATCCAATGCTTCTTGAAAACATATTTCCTAGGAATGAAGGATCTGTCCATCTATGGCAAGGCGATGAAGACAAGCTCGTTCC
CGTCAAGCTACAACGTTATATCGCTCAAAAACTTCCTTGGATTCACTACCATGAATTAGCTGGTGCAGGCCACATTTTTGCATTCACAACTAAAATTAGTGAAGAAATTG
TAAGGTCGCTGCTTTTGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGGTTTGGGAAATGGGAATTTGATCCAATGCTTCTTGAAAACATATTTCCTAGGAATGAAGGATCTGTCCATCTATGGCAAGGCGATGAAGACAAGCTCGTTCC
CGTCAAGCTACAACGTTATATCGCTCAAAAACTTCCTTGGATTCACTACCATGAATTAGCTGGTGCAGGCCACATTTTTGCATTCACAACTAAAATTAGTGAAGAAATTG
TAAGGTCGCTGCTTTTGCAATGA
Protein sequenceShow/hide protein sequence
MIGFGKWEFDPMLLENIFPRNEGSVHLWQGDEDKLVPVKLQRYIAQKLPWIHYHELAGAGHIFAFTTKISEEIVRSLLLQ