; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G08220 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G08220
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAMMECR1 domain-containing protein
Genome locationClcChr08:19712964..19717070
RNA-Seq ExpressionClc08G08220
SyntenyClc08G08220
Gene Ontology termsNA
InterPro domainsIPR002733 - AMMECR1 domain
IPR023473 - AMMECR1
IPR027485 - AMMECR1, N-terminal
IPR036071 - AMMECR1 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646635.1 hypothetical protein Csa_004840 [Cucumis sativus]6.4e-6299.12Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
        VDYEIATNYLDWE
Subjt:  VDYEIATNYLDWE

KAG6578821.1 Vesicle-associated membrane protein 727, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6097.35Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELP+LECTVSIL
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
        VDYEIA NYLDWE
Subjt:  VDYEIATNYLDWE

XP_004140906.1 uncharacterized protein At2g38710 [Cucumis sativus]6.4e-6299.12Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
        VDYEIATNYLDWE
Subjt:  VDYEIATNYLDWE

XP_008456604.1 PREDICTED: uncharacterized protein At2g38710 [Cucumis melo]6.4e-6299.12Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
        VDYEIATNYLDWE
Subjt:  VDYEIATNYLDWE

XP_038884933.1 uncharacterized protein At2g38710 [Benincasa hispida]8.4e-6298.23Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKV+NGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
        VDYEIATNYLDWE
Subjt:  VDYEIATNYLDWE

TrEMBL top hitse value%identityAlignment
A0A0A0KCF5 AMMECR1 domain-containing protein3.1e-6299.12Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
        VDYEIATNYLDWE
Subjt:  VDYEIATNYLDWE

A0A1S3C3L7 uncharacterized protein At2g387103.1e-6299.12Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
        VDYEIATNYLDWE
Subjt:  VDYEIATNYLDWE

A0A6J1BWN8 uncharacterized protein At2g387101.1e-5994.69Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREMVV+CFDTLLAHYNGE+APPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELP+LECTVSIL
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
        VDYE A N+LDWE
Subjt:  VDYEIATNYLDWE

A0A6J1FGH3 uncharacterized protein At2g38710-like5.9e-6197.35Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELP+LECTVSIL
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
        VDYEIA NYLDWE
Subjt:  VDYEIATNYLDWE

A0A6J1JVT1 uncharacterized protein At2g38710-like5.9e-6197.35Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELP+LECTVSIL
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
        VDYEIA NYLDWE
Subjt:  VDYEIATNYLDWE

SwissProt top hitse value%identityAlignment
Q5RDQ3 AMMECR1-like protein5.0e-2550.93Show/hide
Query:  EMVVFCFDTLLAHYNGEEAPP-PAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEI
        EM  +CFD L  H  G   P  P F    +PLFVTWK    G + RLRGCIGT  A  L +G ++Y L SAL+D RFPP+  +ELP L C+VS+L ++E 
Subjt:  EMVVFCFDTLLAHYNGEEAPP-PAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEI

Query:  ATNYLDWE
        A++YLDWE
Subjt:  ATNYLDWE

Q6DCA0 AMMECR1-like protein5.0e-2550.93Show/hide
Query:  EMVVFCFDTLLAHYNGEEAPP-PAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEI
        EM  +CFD L  H  G   P  P F    +PLFVTWK    G + RLRGCIGT  A  L +G ++Y L SAL+D RFPP+  +ELP L C+VS+L ++E 
Subjt:  EMVVFCFDTLLAHYNGEEAPP-PAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEI

Query:  ATNYLDWE
        A++YLDWE
Subjt:  ATNYLDWE

Q8JZZ6 AMMECR1-like protein5.0e-2550.93Show/hide
Query:  EMVVFCFDTLLAHYNGEEAPP-PAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEI
        EM  +CFD L  H  G   P  P F    +PLFVTWK    G + RLRGCIGT  A  L +G ++Y L SAL+D RFPP+  +ELP L C+VS+L ++E 
Subjt:  EMVVFCFDTLLAHYNGEEAPP-PAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEI

Query:  ATNYLDWE
        A++YLDWE
Subjt:  ATNYLDWE

Q9Y4X0 AMME syndrome candidate gene 1 protein1.9e-2450.93Show/hide
Query:  EMVVFCFDTLLAHYNGEEAP-PPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEI
        EM  FCFD L  H  G + P  P F    +PLFVTWK    G + RLRGCIGT  A  L +G ++Y L SAL+D RFPP+   ELP L C+VS+L ++E 
Subjt:  EMVVFCFDTLLAHYNGEEAP-PPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEI

Query:  ATNYLDWE
          +YLDWE
Subjt:  ATNYLDWE

Q9ZVJ2 Uncharacterized protein At2g387104.8e-5280.53Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREM V+CFDTL++HYN EE PPPAF+   HPLFVTWKK+VNGGEPRLRGCIGTLEAR LI+GFKDYAL SALRDRRFPPIQ KELP L+CTVS+L
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
         DYE A +YLDWE
Subjt:  VDYEIATNYLDWE

Arabidopsis top hitse value%identityAlignment
AT2G38710.1 AMMECR1 family3.4e-5380.53Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREM V+CFDTL++HYN EE PPPAF+   HPLFVTWKK+VNGGEPRLRGCIGTLEAR LI+GFKDYAL SALRDRRFPPIQ KELP L+CTVS+L
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
         DYE A +YLDWE
Subjt:  VDYEIATNYLDWE

AT2G38710.2 AMMECR1 family3.4e-5380.53Show/hide
Query:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL
        MVSANREM V+CFDTL++HYN EE PPPAF+   HPLFVTWKK+VNGGEPRLRGCIGTLEAR LI+GFKDYAL SALRDRRFPPIQ KELP L+CTVS+L
Subjt:  MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSIL

Query:  VDYEIATNYLDWE
         DYE A +YLDWE
Subjt:  VDYEIATNYLDWE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atggtgtccgccaacagagagatggtggttttttgtttcgatacccttctcgctcactacaacggcgaggaagcccctccccccgctttcgatggcggtcaacacccctt
gttcgttacctggaaaaaagtggtcaatggtggtgaacctcgtttgcgagggtgcataggaactctagaagctcgctgcttgataaatggcttcaaggattatgctttaa
atagtgcattgagggatcggaggttccccccaatacagcctaaagaattaccatatttggaatgcacagtttccattctagttgattatgaaatagctacaaattatctt
gattgggagaattga
mRNA sequenceShow/hide mRNA sequence
cgcaaaactgagctctagagagagagggaaagaaaagaggagagagaaaaacgctcttctcttcttcttcttcttcttcttcttcttcttccttttcttccggtccttca
attattacagccaccaaattccttctctttccctcaatttctttgtaatttcttaccaaatcatcatcctccgtttgatttttcccaccttcttcacttcactgcttact
gattacagcaaccatggtgtccgccaacagagagatggtggttttttgtttcgatacccttctcgctcactacaacggcgaggaagcccctccccccgctttcgatggcg
gtcaacaccccttgttcgttacctggaaaaaagtggtcaatggtggtgaacctcgtttgcgagggtgcataggaactctagaagctcgctgcttgataaatggcttcaag
gattatgctttaaatagtgcattgagggatcggaggttccccccaatacagcctaaagaattaccatatttggaatgcacagtttccattctagttgattatgaaatagc
tacaaattatcttgattgggagaattga
Protein sequenceShow/hide protein sequence
MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYL
DWEN