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Clc08G08410 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G08410
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:19898871..19899137
RNA-Seq ExpressionClc08G08410
SyntenyClc08G08410
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN46065.1 hypothetical protein Csa_005338 [Cucumis sativus]1.2e-1269.05Show/hide
Query:  MALTFLYSTSSFSSSSSLTRRFANYHFRLRNFPIPPHTWPLSSPSSSSYSLTCFFYDSLFI-DRVCFV-LIPALILLFIFFAAA
        MALTFLYST+SFSSSSSLTRRF NYHFRLRN PI  H W LSS          F   SLFI  R+ FV LIPAL LLFIFFAAA
Subjt:  MALTFLYSTSSFSSSSSLTRRFANYHFRLRNFPIPPHTWPLSSPSSSSYSLTCFFYDSLFI-DRVCFV-LIPALILLFIFFAAA
TrEMBL top hitse value%identityAlignment
A0A0A0K8L2 Uncharacterized protein6.0e-1369.05Show/hide
Query:  MALTFLYSTSSFSSSSSLTRRFANYHFRLRNFPIPPHTWPLSSPSSSSYSLTCFFYDSLFI-DRVCFV-LIPALILLFIFFAAA
        MALTFLYST+SFSSSSSLTRRF NYHFRLRN PI  H W LSS          F   SLFI  R+ FV LIPAL LLFIFFAAA
Subjt:  MALTFLYSTSSFSSSSSLTRRFANYHFRLRNFPIPPHTWPLSSPSSSSYSLTCFFYDSLFI-DRVCFV-LIPALILLFIFFAAA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGACCTTTCTCTATTCTACTTCTTCCTTCTCATCTTCTTCCTCTCTTACACGACGCTTCGCCAACTACCATTTTCGCTTAAGAAATTTCCCCATCCCTCCTCA
CACTTGGCCTCTTTCATCTCCTTCCTCTTCTTCATACAGTCTAACTTGTTTCTTCTATGATTCTCTGTTCATCGACAGAGTGTGTTTCGTGTTAATCCCAGCTCTTATTC
TGCTTTTCATCTTCTTTGCTGCTGCATTTCAGCTTTTATTGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTGACCTTTCTCTATTCTACTTCTTCCTTCTCATCTTCTTCCTCTCTTACACGACGCTTCGCCAACTACCATTTTCGCTTAAGAAATTTCCCCATCCCTCCTCA
CACTTGGCCTCTTTCATCTCCTTCCTCTTCTTCATACAGTCTAACTTGTTTCTTCTATGATTCTCTGTTCATCGACAGAGTGTGTTTCGTGTTAATCCCAGCTCTTATTC
TGCTTTTCATCTTCTTTGCTGCTGCATTTCAGCTTTTATTGGACTGA
Protein sequenceShow/hide protein sequence
MALTFLYSTSSFSSSSSLTRRFANYHFRLRNFPIPPHTWPLSSPSSSSYSLTCFFYDSLFIDRVCFVLIPALILLFIFFAAAFQLLLD