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Clc08G08470 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G08470
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:19942307..19943462
RNA-Seq ExpressionClc08G08470
SyntenyClc08G08470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602236.1 hypothetical protein SDJN03_07469, partial [Cucurbita argyrosperma subsp. sororia]9.1e-1971.26Show/hide
Query:  YSSSY-TNCGQHFLRLIFVKFSSVSVSDLPLSPFSLLVTQFGTSSELLISRLIVSVCFSLSRRFKAYFFVNLFCREGPIQDLYLTAN
        YSSSY  NCGQHF R  F+  S     DLPLS FSLLV QFGTSSELLISR I+ VCFSLSRRFKA FF NLFC    IQDLYL AN
Subjt:  YSSSY-TNCGQHFLRLIFVKFSSVSVSDLPLSPFSLLVTQFGTSSELLISRLIVSVCFSLSRRFKAYFFVNLFCREGPIQDLYLTAN
TrEMBL top hitse value%identityAlignment
A0A0A0KCH0 Uncharacterized protein5.9e-1658.89Show/hide
Query:  MPGSYSSSYTNCGQHFLRLIFVKFSSVSVSDLPLSPFSLLVTQFGTSSELLISRLIVSVCFSLSRRFKAYFFVNLFCREGPIQDLYLTAN
        +PG  S            ++F K  S  + DLPL  FSLLV QFGTSSE LISR IVSV F LSRRFK YFF NLFCR G  QDLYL AN
Subjt:  MPGSYSSSYTNCGQHFLRLIFVKFSSVSVSDLPLSPFSLLVTQFGTSSELLISRLIVSVCFSLSRRFKAYFFVNLFCREGPIQDLYLTAN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGGATCTTATTCATCCTCTTACACAAATTGCGGTCAGCATTTCTTGAGGTTAATTTTTGTAAAATTTTCTTCTGTCTCTGTTTCAGATCTTCCATTATCGCCATT
TTCTCTGCTGGTAACTCAATTCGGCACCTCGAGTGAGCTGTTGATTTCTCGTTTGATCGTTTCTGTGTGCTTTTCCTTAAGTCGGCGATTTAAAGCATATTTCTTTGTGA
ATCTATTCTGTCGCGAGGGCCCGATTCAGGATCTTTATTTGACTGCAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGGATCTTATTCATCCTCTTACACAAATTGCGGTCAGCATTTCTTGAGGTTAATTTTTGTAAAATTTTCTTCTGTCTCTGTTTCAGATCTTCCATTATCGCCATT
TTCTCTGCTGGTAACTCAATTCGGCACCTCGAGTGAGCTGTTGATTTCTCGTTTGATCGTTTCTGTGTGCTTTTCCTTAAGTCGGCGATTTAAAGCATATTTCTTTGTGA
ATCTATTCTGTCGCGAGGGCCCGATTCAGGATCTTTATTTGACTGCAAATTAA
Protein sequenceShow/hide protein sequence
MPGSYSSSYTNCGQHFLRLIFVKFSSVSVSDLPLSPFSLLVTQFGTSSELLISRLIVSVCFSLSRRFKAYFFVNLFCREGPIQDLYLTAN