; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G08840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G08840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionsingle-stranded DNA-binding protein WHY1, chloroplastic-like
Genome locationClcChr08:20285549..20289654
RNA-Seq ExpressionClc08G08840
SyntenyClc08G08840
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006952 - defense response (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
InterPro domainsIPR009044 - ssDNA-binding transcriptional regulator
IPR013742 - Whirly transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456468.1 PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis melo]1.2e-12973.89Show/hide
Query:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK
        MLRLQWLSSSL+P+FN ELSPET+SN +L SLN  RPLLTLTTTRKPSPKCQYSWNT  Q QQS+FEP SQTDSF+ Q+RAG AAAALPPRFFVGHSIYK
Subjt:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK

Query:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG
        GKAALTVEPRPPEFTPLDSGAFKISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CEFFHDPYKGKSDEGKVRKILKVEPLPDGSG
Subjt:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG

Query:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL
        HFFNLS                                                              VQNKLINVDESIYIPITKAEYTVLVEAFKFIL
Subjt:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL

Query:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
        PHLMGWHTIANT+T+PEDSSR N ANPRYGGDFEWNR
Subjt:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

XP_011657483.1 single-stranded DNA-binding protein WHY1, chloroplastic [Cucumis sativus]6.0e-12471.09Show/hide
Query:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAG--VAAAALPPRFFVGHSI
        MLRLQ LSSS +P+FN ELSPET+SN +L +LN  RPL TLTTTRKP+ KCQYSWNT QQ QQSAFEP   TDS + Q+RAG   AAAALPPRFFVGHSI
Subjt:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAG--VAAAALPPRFFVGHSI

Query:  YKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDG
        YKGKAALTVEPRPPEFTPLDSGAFKISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CEFFHDPYKGKSDEGKVRKILKVEPLPDG
Subjt:  YKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDG

Query:  SGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKF
        SGHFFNL+                                                              VQNKLINVDESIYIPITKAEYTVLVEAFKF
Subjt:  SGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKF

Query:  ILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
        ILPHLMGWHTIANT+T+PEDSSR N ANPRYGGDFEWNR
Subjt:  ILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

XP_023546045.1 single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita pepo subsp. pepo]4.3e-12271.81Show/hide
Query:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK
        MLRLQ LSSSL+P    ELSPET SN +L  LNSFRPLLTL+TT K SPKCQYSWNT  QQ Q+AFE GSQTDSF+SQTRAG AAAALPPRFFVGHSIYK
Subjt:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK

Query:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG
        GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCE FHDPYKGKSDEGKVRKILKVEPLPDGSG
Subjt:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG

Query:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL
         FFNLS                                                              VQNKL NVDESIYIPITKAEYTVLVEAFKFIL
Subjt:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL

Query:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
        PHLMGWH IAN++TR ED+ R N+ANPRYGGDFEW+R
Subjt:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

XP_038884310.1 single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X1 [Benincasa hispida]5.8e-13576.56Show/hide
Query:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK
        MLRLQWLSSSL+PSFN EL PE++SN +L SLNSFRPLLTL    KPSPKCQYSWNTQQQQQQS FEPGSQTDSF+SQTRA VAAAALPPRFFVGHSIYK
Subjt:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK

Query:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG
        GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG
Subjt:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG

Query:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL
        HFFNLS                                                              VQNKLINVDESIYIPITKAEYTVLVEAFKF+L
Subjt:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL

Query:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
        PHLMGWHTIANTITRPEDS RVNNANPRYGGDFEWNR
Subjt:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

XP_038884311.1 single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X2 [Benincasa hispida]5.4e-13376.26Show/hide
Query:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK
        MLRLQWLSSSL+PSFN EL PE++SN +L SLNSFRPLLTL    KPSPKCQYSWNTQQQQQQS FEPGSQTDSF+SQTRA  AAAALPPRFFVGHSIYK
Subjt:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK

Query:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG
        GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG
Subjt:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG

Query:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL
        HFFNLS                                                              VQNKLINVDESIYIPITKAEYTVLVEAFKF+L
Subjt:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL

Query:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
        PHLMGWHTIANTITRPEDS RVNNANPRYGGDFEWNR
Subjt:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

TrEMBL top hitse value%identityAlignment
A0A0A0KG25 WHY12.9e-12471.09Show/hide
Query:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAG--VAAAALPPRFFVGHSI
        MLRLQ LSSS +P+FN ELSPET+SN +L +LN  RPL TLTTTRKP+ KCQYSWNT QQ QQSAFEP   TDS + Q+RAG   AAAALPPRFFVGHSI
Subjt:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAG--VAAAALPPRFFVGHSI

Query:  YKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDG
        YKGKAALTVEPRPPEFTPLDSGAFKISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CEFFHDPYKGKSDEGKVRKILKVEPLPDG
Subjt:  YKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDG

Query:  SGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKF
        SGHFFNL+                                                              VQNKLINVDESIYIPITKAEYTVLVEAFKF
Subjt:  SGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKF

Query:  ILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
        ILPHLMGWHTIANT+T+PEDSSR N ANPRYGGDFEWNR
Subjt:  ILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

A0A1S3C3B0 single-stranded DNA-binding protein WHY1, chloroplastic-like6.1e-13073.89Show/hide
Query:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK
        MLRLQWLSSSL+P+FN ELSPET+SN +L SLN  RPLLTLTTTRKPSPKCQYSWNT  Q QQS+FEP SQTDSF+ Q+RAG AAAALPPRFFVGHSIYK
Subjt:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK

Query:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG
        GKAALTVEPRPPEFTPLDSGAFKISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CEFFHDPYKGKSDEGKVRKILKVEPLPDGSG
Subjt:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG

Query:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL
        HFFNLS                                                              VQNKLINVDESIYIPITKAEYTVLVEAFKFIL
Subjt:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL

Query:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
        PHLMGWHTIANT+T+PEDSSR N ANPRYGGDFEWNR
Subjt:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

A0A5D3BP35 Single-stranded DNA-binding protein WHY16.1e-13073.89Show/hide
Query:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK
        MLRLQWLSSSL+P+FN ELSPET+SN +L SLN  RPLLTLTTTRKPSPKCQYSWNT  Q QQS+FEP SQTDSF+ Q+RAG AAAALPPRFFVGHSIYK
Subjt:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK

Query:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG
        GKAALTVEPRPPEFTPLDSGAFKISREG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CEFFHDPYKGKSDEGKVRKILKVEPLPDGSG
Subjt:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG

Query:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL
        HFFNLS                                                              VQNKLINVDESIYIPITKAEYTVLVEAFKFIL
Subjt:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL

Query:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
        PHLMGWHTIANT+T+PEDSSR N ANPRYGGDFEWNR
Subjt:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

A0A6J1DD66 single-stranded DNA-binding protein WHY1, chloroplastic-like5.7e-12069.79Show/hide
Query:  MLRLQWLSSSLVPS-FNSELSPETVSNC---KLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGH
        MLRLQWLSSSL+P   N ELSPET   C   +L +LNS RPLLTLT TRKPSPKCQYSW+TQQQQ   + EPGSQ  SF+ QTRAG AA ALPPRFFVGH
Subjt:  MLRLQWLSSSLVPS-FNSELSPETVSNC---KLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGH

Query:  SIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLP
        SIYKGKA LTVEPRPPEFTPLDSGAFK+SREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALG R+SCEFFHDPYKGKS+EGKVRKILKVEPLP
Subjt:  SIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLP

Query:  DGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAF
        DGSGHFFNLS                                                              VQNKLIN+DESIYIPITKAEYTVLVEAF
Subjt:  DGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAF

Query:  KFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
        KFILPHLMGWH I+NT+TR EDS RVNNANPRYGGDFEW+R
Subjt:  KFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

A0A6J1G4J7 single-stranded DNA-binding protein WHY1, chloroplastic-like3.9e-12171.22Show/hide
Query:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK
        MLRLQ LSSSL+P    ELSPET SN +L  LNSFRPLLTL+TT K SPKCQYSWNT  QQ Q+AFE G QTDSF+SQTRAG AAAALPPRFFVGHSIYK
Subjt:  MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYK

Query:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG
        GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCE FHDPYKGKSDEGKVRK+LKVEPLPDGSG
Subjt:  GKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSG

Query:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL
         FFNLS                                                              VQNKL NVDESIYIPITKAEYTVLVEAFKFIL
Subjt:  HFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFIL

Query:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
        PHLMGWH IAN+ TR ED+ R N+ANPRYGGDFEW+R
Subjt:  PHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

SwissProt top hitse value%identityAlignment
B2LXS7 Single-stranded DNA-binding protein WHY1, chloroplastic3.0e-6248.99Show/hide
Query:  RFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKIL
        R F  +SIYKGKAAL+ +PRPP F PLDSGA+K+++EGFVLLQFAPA   RQYDW+RKQVFSLSV E+G+L+ LGP +SCEFFHDP+KG+S+EGKVRK+L
Subjt:  RFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKIL

Query:  KVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYT
        K+EP PDG+G FFNLS                                                              VQN+LINVDESIYIPITK E+ 
Subjt:  KVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYT

Query:  VLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
        V+V  F +I+PHLMGW T  ++I +PE+S     + P+   ++EW R
Subjt:  VLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

Q66GR6 Single-stranded DNA-binding protein WHY3, chloroplastic9.4e-8056.03Show/hide
Query:  TQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVT
        T + +Q   FE     DS +SQ      A    PRF+VGHSIYKGKAALT+EPR PEF  L+SGAFK+++EGF+LLQFAPAAGVRQYDWSRKQVFSLSVT
Subjt:  TQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVT

Query:  ELGSLVALGPRESCEFFHDPYKGK-SDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLF
        E+G+LV+LGPRESCEFFHDP+KGK SDEGKVRK+LKVEPLPDGSG FFNLS                                                 
Subjt:  ELGSLVALGPRESCEFFHDPYKGK-SDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLF

Query:  PTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
                     VQNKL+NVDES+YIPITKAE+ VL+ AF F+LPHL+GW   AN+I +PEDS+R+NNA+P+YGGD+EW+R
Subjt:  PTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

Q8VYF7 Single-stranded DNA-binding protein WHY2, mitochondrial9.9e-3733.57Show/hide
Query:  QQQSAFEPGSQTDSFASQTRA--------GVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFS
        Q +S FE  S    FAS + +        G  AA    R F  +SI+KGKAAL+VEP  P FT +DSG  +I R G +++ F PA G R+YDW +KQ F+
Subjt:  QQQSAFEPGSQTDSFASQTRA--------GVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFS

Query:  LSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARG
        LS TE+GSL+++G ++S EFFHDP    S+ G+VRK L V+P  DGSG+F +LS                                              
Subjt:  LSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARG

Query:  SLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTI-TRPEDSSRVNNANPRYGGDFEWNR
                        V N ++  ++   +P+TKAE+ V+  AF F LPH+MGW+ +   + T    S  V++       + EW++
Subjt:  SLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTI-TRPEDSSRVNNANPRYGGDFEWNR

Q9LL85 Single-stranded DNA-binding protein WHY1, chloroplastic1.2e-7752.88Show/hide
Query:  RKPSPKCQYS--WNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQ
        R  S  C++S  +  QQQQQQ   +P                  A  P+ FVG+SIYKGKAALTVEPR PEF+PLDSGAFK+SREG V+LQFAPAAGVRQ
Subjt:  RKPSPKCQYS--WNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQ

Query:  YDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTI
        YDWSRKQVFSLSVTE+GS+++LG ++SCEFFHDP KG+SDEG+VRK+LKVEPLPDGSGHFFNLS                                    
Subjt:  YDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTI

Query:  DPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
                                  VQNKLIN+DE+IYIP+TKAE+ VLV AF F++P+L+GWHT  N+  +PED+SR NNANPR G + EWNR
Subjt:  DPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

Q9M9S3 Single-stranded DNA-binding protein WHY1, chloroplastic1.6e-8257.72Show/hide
Query:  QTDSFASQ-----TRAGVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALG
        QTD F  Q     + +   A  LP RF+VGHSIYKGKAALTV+PR PEF  LDSGAFK+S++GF+LLQFAP+AGVRQYDWS+KQVFSLSVTE+G+LV+LG
Subjt:  QTDSFASQ-----TRAGVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALG

Query:  PRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILM
        PRESCEFFHDP+KGKSDEGKVRK+LKVEPLPDGSGHFFNLS                                                           
Subjt:  PRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILM

Query:  HKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
           VQNKL+NVDESIYIPIT+AE+ VL+ AF F+LP+L+GWH  AN+I +PE++SRVNNA+P YGGD+EWNR
Subjt:  HKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

Arabidopsis top hitse value%identityAlignment
AT1G14410.1 ssDNA-binding transcriptional regulator1.1e-8357.72Show/hide
Query:  QTDSFASQ-----TRAGVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALG
        QTD F  Q     + +   A  LP RF+VGHSIYKGKAALTV+PR PEF  LDSGAFK+S++GF+LLQFAP+AGVRQYDWS+KQVFSLSVTE+G+LV+LG
Subjt:  QTDSFASQ-----TRAGVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALG

Query:  PRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILM
        PRESCEFFHDP+KGKSDEGKVRK+LKVEPLPDGSGHFFNLS                                                           
Subjt:  PRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILM

Query:  HKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
           VQNKL+NVDESIYIPIT+AE+ VL+ AF F+LP+L+GWH  AN+I +PE++SRVNNA+P YGGD+EWNR
Subjt:  HKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

AT1G71260.1 WHIRLY 27.0e-3833.57Show/hide
Query:  QQQSAFEPGSQTDSFASQTRA--------GVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFS
        Q +S FE  S    FAS + +        G  AA    R F  +SI+KGKAAL+VEP  P FT +DSG  +I R G +++ F PA G R+YDW +KQ F+
Subjt:  QQQSAFEPGSQTDSFASQTRA--------GVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFS

Query:  LSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARG
        LS TE+GSL+++G ++S EFFHDP    S+ G+VRK L V+P  DGSG+F +LS                                              
Subjt:  LSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARG

Query:  SLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTI-TRPEDSSRVNNANPRYGGDFEWNR
                        V N ++  ++   +P+TKAE+ V+  AF F LPH+MGW+ +   + T    S  V++       + EW++
Subjt:  SLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTI-TRPEDSSRVNNANPRYGGDFEWNR

AT2G02740.1 ssDNA-binding transcriptional regulator6.7e-8156.03Show/hide
Query:  TQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVT
        T + +Q   FE     DS +SQ      A    PRF+VGHSIYKGKAALT+EPR PEF  L+SGAFK+++EGF+LLQFAPAAGVRQYDWSRKQVFSLSVT
Subjt:  TQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVT

Query:  ELGSLVALGPRESCEFFHDPYKGK-SDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLF
        E+G+LV+LGPRESCEFFHDP+KGK SDEGKVRK+LKVEPLPDGSG FFNLS                                                 
Subjt:  ELGSLVALGPRESCEFFHDPYKGK-SDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLF

Query:  PTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
                     VQNKL+NVDES+YIPITKAE+ VL+ AF F+LPHL+GW   AN+I +PEDS+R+NNA+P+YGGD+EW+R
Subjt:  PTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR

AT2G02740.2 ssDNA-binding transcriptional regulator7.9e-8255.87Show/hide
Query:  TQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVT
        T + +Q   FE     DS +SQ      A    PRF+VGHSIYKGKAALT+EPR PEF  L+SGAFK+++EGF+LLQFAPAAGVRQYDWSRKQVFSLSVT
Subjt:  TQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVT

Query:  ELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFP
        E+G+LV+LGPRESCEFFHDP+KGK DEGKVRK+LKVEPLPDGSG FFNLS                                                  
Subjt:  ELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCIETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFP

Query:  TYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR
                    VQNKL+NVDES+YIPITKAE+ VL+ AF F+LPHL+GW   AN+I +PEDS+R+NNA+P+YGGD+EW+R
Subjt:  TYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITRPEDSSRVNNANPRYGGDFEWNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCGTCTTCAATGGCTTTCTTCTTCCTTAGTTCCGTCATTCAACTCTGAACTCTCGCCGGAAACTGTTTCGAACTGCAAACTGGGTAGCCTCAACTCCTTT
CGCCCTCTCCTCACTCTCACTACTACACGCAAACCTTCTCCAAAATGCCAATACTCCTGGAACACGCAGCAGCAGCAGCAGCAGTCGGCCTTCGAACCGGGCTCT
CAAACCGATTCATTTGCCTCACAAACTCGCGCCGGAGTAGCTGCTGCTGCATTGCCACCAAGGTTTTTTGTTGGTCATTCGATATACAAAGGAAAGGCTGCTCTT
ACAGTTGAGCCTAGGCCACCAGAGTTTACACCTCTAGATTCAGGGGCTTTCAAAATATCCAGGGAAGGATTTGTGTTGCTTCAATTTGCTCCTGCAGCTGGTGTT
CGTCAATATGATTGGAGCAGAAAACAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTTGTTGCCCTTGGTCCACGAGAGTCTTGCGAATTCTTTCACGAT
CCCTATAAGGGAAAAAGTGATGAAGGGAAAGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCAGATGGTTCTGGCCATTTCTTCAATCTCAGTAAGTCTTGTATT
GAAACCTTTATGATCCATTTGAGATTGAATGTAAATGCTGAATTCTGCTTCATGGATGTTCAGTTGAAGAGAGGGTACATGTTACCTCCAACCATTGATCCTGTG
AACTGCATTGATGCTAGAGGAAGTCTTTTTCCCACTTACATTTTCTGTTCTATTTTGATGCACAAAGGCGTTCAGAACAAGCTAATCAACGTGGATGAGAGCATT
TATATTCCTATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTATCTTGCCGCACCTCATGGGTTGGCATACGATTGCAAACACCATCACGAGG
CCTGAAGATAGCAGCCGAGTAAATAACGCCAATCCCAGATATGGAGGTGACTTTGAATGGAACAGATAG
mRNA sequenceShow/hide mRNA sequence
AAAAGATCGATCCACCTTTTTACACCAATCGAGAATGTATTTTGCTTCGAAAGGGAAATAAACTTTGTACGGCCAGGGGTTTGGAGTTGGACTCTAATCTAACTC
CGCCGGTTCGCTCTCTAATCCTCACCGCGATAGAATAGTCGCGAAGACAAAGCCCAAACGATGCTGCGTCTTCAATGGCTTTCTTCTTCCTTAGTTCCGTCATTC
AACTCTGAACTCTCGCCGGAAACTGTTTCGAACTGCAAACTGGGTAGCCTCAACTCCTTTCGCCCTCTCCTCACTCTCACTACTACACGCAAACCTTCTCCAAAA
TGCCAATACTCCTGGAACACGCAGCAGCAGCAGCAGCAGTCGGCCTTCGAACCGGGCTCTCAAACCGATTCATTTGCCTCACAAACTCGCGCCGGAGTAGCTGCT
GCTGCATTGCCACCAAGGTTTTTTGTTGGTCATTCGATATACAAAGGAAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCAGAGTTTACACCTCTAGATTCAGGG
GCTTTCAAAATATCCAGGGAAGGATTTGTGTTGCTTCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTATTCTCATTATCAGTG
ACAGAATTGGGAAGTCTTGTTGCCCTTGGTCCACGAGAGTCTTGCGAATTCTTTCACGATCCCTATAAGGGAAAAAGTGATGAAGGGAAAGTCAGAAAGATACTA
AAAGTGGAGCCTCTTCCAGATGGTTCTGGCCATTTCTTCAATCTCAGTAAGTCTTGTATTGAAACCTTTATGATCCATTTGAGATTGAATGTAAATGCTGAATTC
TGCTTCATGGATGTTCAGTTGAAGAGAGGGTACATGTTACCTCCAACCATTGATCCTGTGAACTGCATTGATGCTAGAGGAAGTCTTTTTCCCACTTACATTTTC
TGTTCTATTTTGATGCACAAAGGCGTTCAGAACAAGCTAATCAACGTGGATGAGAGCATTTATATTCCTATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCT
TTCAAGTTTATCTTGCCGCACCTCATGGGTTGGCATACGATTGCAAACACCATCACGAGGCCTGAAGATAGCAGCCGAGTAAATAACGCCAATCCCAGATATGGA
GGTGACTTTGAATGGAACAGATAGTCTCTACTTTTTCTTAGGCTGAAGATGATTGTTGTGCTTATTTCAGTTATCCTGATCAAACTACTTATCGGCTAATCACCT
TTTTGAATCTATGGGTCGACGTTTTTTTTAATATATCTCTAAACCCTAGAATATATATAATTTTGTATATTAGTTTTAAATATTAGTCTGAAAGTTACTTATGAA
TATACATTATCAATGATATTTAACATTCGTTGGTTTTTCCAATTTTGACTAGATCTATTACTTATACCTTATCGAGGGGGG
Protein sequenceShow/hide protein sequence
MLRLQWLSSSLVPSFNSELSPETVSNCKLGSLNSFRPLLTLTTTRKPSPKCQYSWNTQQQQQQSAFEPGSQTDSFASQTRAGVAAAALPPRFFVGHSIYKGKAAL
TVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSKSCI
ETFMIHLRLNVNAEFCFMDVQLKRGYMLPPTIDPVNCIDARGSLFPTYIFCSILMHKGVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTITR
PEDSSRVNNANPRYGGDFEWNR