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Clc08G09090 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G09090
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCLAVATA3/ESR (CLE)-related protein 25-like
Genome locationClcChr08:20517182..20518359
RNA-Seq ExpressionClc08G09090
SyntenyClc08G09090
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030012.1 CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperma]8.2e-3271.15Show/hide
Query:  MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGG-GRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRP
        MS YSPSCK  ++AVM FIWLLL NGSHQRG+ VA G+   T T   +F GIS E EVVGG G   +V  EWHLNY+SKRRVPNGPDPIHNRRAGNSGRP
Subjt:  MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGG-GRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA

XP_004146759.1 uncharacterized protein LOC101209880 [Cucumis sativus]4.1e-3173.58Show/hide
Query:  MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEV-VGGGRNKLV--HPEWHLNYISKRRVPNGPDPIHNRRAGNSG
        M+CY  SCK GSL +MAFIWLLLANGS QR EPV VG  K T     E SGIS E  V VGGGR   V  HPEWHLNY+SKRRVPNGPDPIHNRRAGNSG
Subjt:  MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEV-VGGGRNKLV--HPEWHLNYISKRRVPNGPDPIHNRRAGNSG

Query:  RPPGKA
        RPPGKA
Subjt:  RPPGKA

XP_008464794.1 PREDICTED: uncharacterized protein LOC103502597 [Cucumis melo]9.1e-3172.28Show/hide
Query:  CYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGGGRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGK
        C+  SCK GSL VMAFIWLLLANGS QR EPV VG  K T  M  EFSG+  +  VV GG     HPEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGK
Subjt:  CYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGGGRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGK

Query:  A
        A
Subjt:  A

XP_022999782.1 uncharacterized protein LOC111494028 [Cucurbita maxima]5.3e-3171.15Show/hide
Query:  MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGG-GRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRP
        MS YSPSCK  ++AVM FIWLLL NGSHQRG+ VA G+  GT     +F GIS E EVVGG G   +V  EWHLNY+SKRRVPNGPDPIHNRRAGNSGRP
Subjt:  MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGG-GRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA

XP_038886261.1 uncharacterized protein LOC120076488 [Benincasa hispida]1.5e-3879.63Show/hide
Query:  MSCYSPSCKLG-SLAVMAFIWLLLANGSHQRGEPVAVGIEKG----TATMTGEFSGISGEKEVVGGGRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGN
        MSCYSPSCKLG SLAVM FI+LLL NGSHQR +PVA  +EK     TATMT EFSGIS E +VV GGR K+VHPEWHLNY+SKRRVPNGPDPIHNRRAGN
Subjt:  MSCYSPSCKLG-SLAVMAFIWLLLANGSHQRGEPVAVGIEKG----TATMTGEFSGISGEKEVVGGGRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGN

Query:  SGRPPGKA
        SGRPPGKA
Subjt:  SGRPPGKA

TrEMBL top hitse value%identityAlignment
A0A0A0KJ25 Uncharacterized protein2.0e-3173.58Show/hide
Query:  MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEV-VGGGRNKLV--HPEWHLNYISKRRVPNGPDPIHNRRAGNSG
        M+CY  SCK GSL +MAFIWLLLANGS QR EPV VG  K T     E SGIS E  V VGGGR   V  HPEWHLNY+SKRRVPNGPDPIHNRRAGNSG
Subjt:  MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEV-VGGGRNKLV--HPEWHLNYISKRRVPNGPDPIHNRRAGNSG

Query:  RPPGKA
        RPPGKA
Subjt:  RPPGKA

A0A1S3CMA2 uncharacterized protein LOC1035025974.4e-3172.28Show/hide
Query:  CYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGGGRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGK
        C+  SCK GSL VMAFIWLLLANGS QR EPV VG  K T  M  EFSG+  +  VV GG     HPEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGK
Subjt:  CYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGGGRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGK

Query:  A
        A
Subjt:  A

A0A5A7TRB3 Clavata3/esr-related 26, putative isoform 14.4e-3172.28Show/hide
Query:  CYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGGGRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGK
        C+  SCK GSL VMAFIWLLLANGS QR EPV VG  K T  M  EFSG+  +  VV GG     HPEWHLNY+SKRRVPNGPDPIHNRRAGNSGRPPGK
Subjt:  CYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGGGRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGK

Query:  A
        A
Subjt:  A

A0A6J1G3Y8 uncharacterized protein LOC1114505634.4e-3171.15Show/hide
Query:  MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGG-GRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRP
        MS YSPSCK  ++AVM FIWLLL NGSHQRG+ VA G+   T T   +F GIS E EVVGG G   +V  EWHLNY+SKRRVPNGPDPIHNRRAGNSGRP
Subjt:  MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGG-GRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA

A0A6J1KBR7 uncharacterized protein LOC1114940282.6e-3171.15Show/hide
Query:  MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGG-GRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRP
        MS YSPSCK  ++AVM FIWLLL NGSHQRG+ VA G+  GT     +F GIS E EVVGG G   +V  EWHLNY+SKRRVPNGPDPIHNRRAGNSGRP
Subjt:  MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGG-GRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRP

Query:  PGKA
        PGKA
Subjt:  PGKA

SwissProt top hitse value%identityAlignment
Q8LFL4 CLAVATA3/ESR (CLE)-related protein 252.6e-0468.97Show/hide
Query:  HLNYISKRRVPNGPDPIHNRRAGNSGRPP
        +L ++SKR+VPNGPDPIHNR+A  S RPP
Subjt:  HLNYISKRRVPNGPDPIHNRRAGNSGRPP

Arabidopsis top hitse value%identityAlignment
AT1G69970.2 CLAVATA3/ESR-RELATED 266.7e-0858Show/hide
Query:  EKEVVGGGRNKLVHPEWHLNYI-SKRRVPNGPDPIHNRRAGNSGRPPGKA
        ++E+  G RN        L+Y+ SKR+VP GPDPIHNRRAGNS RPPG+A
Subjt:  EKEVVGGGRNKLVHPEWHLNYI-SKRRVPNGPDPIHNRRAGNSGRPPGKA

AT3G28455.1 CLAVATA3/ESR-RELATED 251.8e-0568.97Show/hide
Query:  HLNYISKRRVPNGPDPIHNRRAGNSGRPP
        +L ++SKR+VPNGPDPIHNR+A  S RPP
Subjt:  HLNYISKRRVPNGPDPIHNRRAGNSGRPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTTATTCTCCTTCTTGTAAGCTTGGCTCACTGGCTGTTATGGCTTTTATTTGGCTTTTGTTGGCCAACGGTTCGCATCAAAGGGGAGAACCGGTTGCGGTAGG
GATTGAGAAGGGGACGGCGACGATGACAGGTGAATTCAGTGGAATTTCTGGAGAGAAGGAGGTGGTCGGTGGTGGTCGCAACAAGCTTGTTCATCCAGAGTGGCACCTCA
ACTACATAAGCAAGAGAAGAGTTCCAAATGGCCCAGATCCTATCCATAACCGGAGAGCTGGAAACTCTGGAAGACCACCAGGCAAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGTTATTCTCCTTCTTGTAAGCTTGGCTCACTGGCTGTTATGGCTTTTATTTGGCTTTTGTTGGCCAACGGTTCGCATCAAAGGGGAGAACCGGTTGCGGTAGG
GATTGAGAAGGGGACGGCGACGATGACAGGTGAATTCAGTGGAATTTCTGGAGAGAAGGAGGTGGTCGGTGGTGGTCGCAACAAGCTTGTTCATCCAGAGTGGCACCTCA
ACTACATAAGCAAGAGAAGAGTTCCAAATGGCCCAGATCCTATCCATAACCGGAGAGCTGGAAACTCTGGAAGACCACCAGGCAAGGCTTAG
Protein sequenceShow/hide protein sequence
MSCYSPSCKLGSLAVMAFIWLLLANGSHQRGEPVAVGIEKGTATMTGEFSGISGEKEVVGGGRNKLVHPEWHLNYISKRRVPNGPDPIHNRRAGNSGRPPGKA