; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G09330 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G09330
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBeta-galactosidase
Genome locationClcChr08:20780926..20781282
RNA-Seq ExpressionClc08G09330
SyntenyClc08G09330
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0048046 - apoplast (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
InterPro domainsIPR001944 - Glycoside hydrolase, family 35
IPR017853 - Glycoside hydrolase superfamily
IPR019801 - Glycoside hydrolase, family 35, conserved site
IPR031330 - Glycoside hydrolase 35, catalytic domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045403.1 beta-galactosidase-like [Cucumis melo var. makuwa]2.1e-6394.07Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWC QMAESLNV VPWIMCQQ DAPQPIINTCNG+YC+NFTPNNP++PKMFTENWVGWFKK
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WGDKDPHRTAEDVAFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

XP_008447673.1 PREDICTED: beta-galactosidase 15-like [Cucumis melo]7.9e-6392.37Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        MCKQANLFASQGGPIILAQIENEYGNVMTPYG AGKTYINWC QMAESLN+ +PWIMCQQ+DAPQPIINTCNG YC+NFTPNNPN+PKMFTENWVGWFKK
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WGDKDPHRTAEDVAFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

XP_008459141.1 PREDICTED: beta-galactosidase 15-like [Cucumis melo]2.1e-6394.07Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWC QMAESLNV VPWIMCQQ DAPQPII+TCNG+YC+NFTPNNPN+PKMFTENWVGWFKK
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WGDKDPHRTAEDVAFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

XP_008464891.1 PREDICTED: beta-galactosidase-like [Cucumis melo]2.1e-6394.07Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWC QMAESLNV VPWIMCQQ DAPQPIINTCNG+YC+NFTPNNP++PKMFTENWVGWFKK
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WGDKDPHRTAEDVAFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

XP_011652808.2 beta-galactosidase-like [Cucumis sativus]7.9e-6392.37Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        MCKQANLFASQGGPIILAQIENEYGNVMTPYG AGKTYINWC QMAESLN+ +PWIMCQQ+DAPQPIINTCNG YC+NFTPNNPN+PKMFTENWVGWFKK
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WGDKDPHRTAEDVAFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

TrEMBL top hitse value%identityAlignment
A0A0A0LDH9 Beta-galactosidase3.8e-6392.37Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        MCKQANLFASQGGPIILAQIENEYGNVMTPYG AGKTYINWC QMAESLN+ +PWIMCQQ+DAPQPIINTCNG YC+NFTPNNPN+PKMFTENWVGWFKK
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WGDKDPHRTAEDVAFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

A0A1S3C8Z9 Beta-galactosidase1.0e-6394.07Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWC QMAESLNV VPWIMCQQ DAPQPII+TCNG+YC+NFTPNNPN+PKMFTENWVGWFKK
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WGDKDPHRTAEDVAFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

A0A1S3CP45 Beta-galactosidase1.0e-6394.07Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWC QMAESLNV VPWIMCQQ DAPQPIINTCNG+YC+NFTPNNP++PKMFTENWVGWFKK
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WGDKDPHRTAEDVAFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

A0A5A7TPD9 Beta-galactosidase1.0e-6394.07Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWC QMAESLNV VPWIMCQQ DAPQPIINTCNG+YC+NFTPNNP++PKMFTENWVGWFKK
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WGDKDPHRTAEDVAFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

A0A5D3DA46 Beta-galactosidase3.8e-6392.37Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        MCKQANLFASQGGPIILAQIENEYGNVMTPYG AGKTYINWC QMAESLN+ +PWIMCQQ+DAPQPIINTCNG YC+NFTPNNPN+PKMFTENWVGWFKK
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WGDKDPHRTAEDVAFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

SwissProt top hitse value%identityAlignment
P49676 Beta-galactosidase3.3e-4869.49Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        M K+ +LFASQGGPIILAQIENEYGNV++ YG  GK YI+WC  MA SL++ VPWIMCQQ  APQP+I TCNG YC+ + P+NP++PKM+TENW GWFK 
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WG K P+RTAED+AFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

Q10NX8 Beta-galactosidase 68.0e-4263.79Show/hide
Query:  KQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKKWG
        K A L+ASQGGPIIL+QIENEYGN+ + YG AGK Y+ W   MA SL+  VPW+MCQQ+DAP P+INTCNG YC+ FTPN+ + PKM+TENW GWF  +G
Subjt:  KQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKKWG

Query:  DKDPHRTAEDVAFSVA
           P+R AED+AF+VA
Subjt:  DKDPHRTAEDVAFSVA

Q9C6W4 Beta-galactosidase 152.0e-5375.42Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        M K+  LFASQGGPIILAQIENEYGNV+  YG AGK YI WC  MA SL+V VPWIMCQQ+DAPQP++NTCNG+YC+NF+PNNPN PKM+TENW GW+K 
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WG KDPHRT EDVAF+VA
Subjt:  WGDKDPHRTAEDVAFSVA

Q9SCV4 Beta-galactosidase 86.1e-4263.56Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        + KQ  L+ASQGGPIIL+QIENEYGN+ + YG A K+YI W   MA SL+  VPW MCQQ DAP P+INTCNG YC+ FTPN+ N PKM+TENW GWF  
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        +GD  P+R  ED+AF+VA
Subjt:  WGDKDPHRTAEDVAFSVA

Q9SCV5 Beta-galactosidase 71.3e-4767.8Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        M K+  LFASQGGPIILAQIENEYGNV++ YG  GK YI+WC  MA SL++ VPW+MCQQ +APQP++ TCNG YC+ + P NP+ PKM+TENW GWFK 
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WG K P+RTAED+AFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

Arabidopsis top hitse value%identityAlignment
AT1G31740.1 beta-galactosidase 151.4e-5475.42Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        M K+  LFASQGGPIILAQIENEYGNV+  YG AGK YI WC  MA SL+V VPWIMCQQ+DAPQP++NTCNG+YC+NF+PNNPN PKM+TENW GW+K 
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WG KDPHRT EDVAF+VA
Subjt:  WGDKDPHRTAEDVAFSVA

AT2G28470.1 beta-galactosidase 84.3e-4363.56Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        + KQ  L+ASQGGPIIL+QIENEYGN+ + YG A K+YI W   MA SL+  VPW MCQQ DAP P+INTCNG YC+ FTPN+ N PKM+TENW GWF  
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        +GD  P+R  ED+AF+VA
Subjt:  WGDKDPHRTAEDVAFSVA

AT2G28470.2 beta-galactosidase 84.3e-4363.56Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        + KQ  L+ASQGGPIIL+QIENEYGN+ + YG A K+YI W   MA SL+  VPW MCQQ DAP P+INTCNG YC+ FTPN+ N PKM+TENW GWF  
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        +GD  P+R  ED+AF+VA
Subjt:  WGDKDPHRTAEDVAFSVA

AT5G20710.1 beta-galactosidase 79.0e-4967.8Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        M K+  LFASQGGPIILAQIENEYGNV++ YG  GK YI+WC  MA SL++ VPW+MCQQ +APQP++ TCNG YC+ + P NP+ PKM+TENW GWFK 
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        WG K P+RTAED+AFSVA
Subjt:  WGDKDPHRTAEDVAFSVA

AT5G63810.1 beta-galactosidase 102.1e-4261.86Show/hide
Query:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK
        + KQ  LFA QGGPIIL+Q+ENEYG     YG  GK Y  W   MA S N+ VPW+MCQQ DAP  +I+TCNG YC+ FTPN P+ PK++TENW GWFK 
Subjt:  MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKK

Query:  WGDKDPHRTAEDVAFSVA
        +G +DPHR AEDVA+SVA
Subjt:  WGDKDPHRTAEDVAFSVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAAACAAGCAAACCTCTTTGCCTCACAAGGAGGGCCAATAATCTTAGCTCAAATTGAGAATGAATATGGAAACGTGATGACACCTTATGGAAATGCAGGAAAAAC
ATATATAAATTGGTGTACTCAAATGGCTGAATCTCTTAATGTTAGTGTTCCATGGATCATGTGCCAACAGAATGATGCCCCACAACCAATCATTAATACATGCAATGGAC
ACTATTGTAACAACTTTACTCCTAACAATCCTAATAACCCAAAAATGTTTACTGAAAATTGGGTGGGATGGTTCAAGAAATGGGGCGATAAAGACCCTCATAGAACTGCT
GAAGACGTAGCATTTTCTGTGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTAAACAAGCAAACCTCTTTGCCTCACAAGGAGGGCCAATAATCTTAGCTCAAATTGAGAATGAATATGGAAACGTGATGACACCTTATGGAAATGCAGGAAAAAC
ATATATAAATTGGTGTACTCAAATGGCTGAATCTCTTAATGTTAGTGTTCCATGGATCATGTGCCAACAGAATGATGCCCCACAACCAATCATTAATACATGCAATGGAC
ACTATTGTAACAACTTTACTCCTAACAATCCTAATAACCCAAAAATGTTTACTGAAAATTGGGTGGGATGGTTCAAGAAATGGGGCGATAAAGACCCTCATAGAACTGCT
GAAGACGTAGCATTTTCTGTGGCTTGA
Protein sequenceShow/hide protein sequence
MCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKTYINWCTQMAESLNVSVPWIMCQQNDAPQPIINTCNGHYCNNFTPNNPNNPKMFTENWVGWFKKWGDKDPHRTA
EDVAFSVA