; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G09420 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G09420
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionincreased DNA methylation 3-like
Genome locationClcChr08:20827154..20827737
RNA-Seq ExpressionClc08G09420
SyntenyClc08G09420
Gene Ontology termsGO:1901537 - positive regulation of DNA demethylation (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR039321 - Increased DNA methylation 2/3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144249.1 increased DNA methylation 3 [Cucumis sativus]6.6e-7297.22Show/hide
Query:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT
        MEG+GDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVM+GPGFLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADS  PL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL

XP_008464810.1 PREDICTED: increased DNA methylation 3 isoform X1 [Cucumis melo]8.1e-7093.92Show/hide
Query:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRS----KVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPP
        MEG+GDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDR+    KVKFEIKSDGKVQIEGVM+GPGFLKESSAMYQMKVQQLCPP
Subjt:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRS----KVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPP

Query:  GPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL
        GPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADS  PL
Subjt:  GPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL

XP_008464812.1 PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo]6.6e-7297.22Show/hide
Query:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT
        MEG+GDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVM+GPGFLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADS  PL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL

XP_022951227.1 increased DNA methylation 3-like [Cucurbita moschata]3.4e-6893.01Show/hide
Query:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT
        MEGHGD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+V IEGVMTGPG LK+SSAMYQMKVQQLCPPG FT
Subjt:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSP
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADSH P
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSP

XP_038884247.1 increased DNA methylation 3 [Benincasa hispida]5.6e-7195.83Show/hide
Query:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT
        MEGHGDQT+ KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPG LKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL
        VSFKLPGPVDPRLS PSFRPDGILEVVVMKSRA PTVADSH PL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL

TrEMBL top hitse value%identityAlignment
A0A0A0KDF2 SHSP domain-containing protein3.2e-7297.22Show/hide
Query:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT
        MEG+GDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVM+GPGFLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADS  PL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL

A0A1S3CMB7 increased DNA methylation 3 isoform X13.9e-7093.92Show/hide
Query:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRS----KVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPP
        MEG+GDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDR+    KVKFEIKSDGKVQIEGVM+GPGFLKESSAMYQMKVQQLCPP
Subjt:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRS----KVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPP

Query:  GPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL
        GPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADS  PL
Subjt:  GPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL

A0A1S3CMV5 increased DNA methylation 3 isoform X23.2e-7297.22Show/hide
Query:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT
        MEG+GDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVM+GPGFLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADS  PL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL

A0A5D3CM92 Increased DNA methylation 3 isoform X23.2e-7297.22Show/hide
Query:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT
        MEG+GDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVM+GPGFLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADS  PL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL

A0A6J1GI33 increased DNA methylation 3-like1.7e-6893.01Show/hide
Query:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT
        MEGHGD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+V IEGVMTGPG LK+SSAMYQMKVQQLCPPG FT
Subjt:  MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSP
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADSH P
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSHSP

SwissProt top hitse value%identityAlignment
Q84K79 Alpha-crystallin domain-containing protein 22.35.9e-2347.93Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEG-VMTGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV
        K  V LTG+A  G  G  IGLVDI  SE +Y FRVALPGV +D  +   EI+ DGK+ I+G   TG   + + + +++M  Q LCPPG FT++F+LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEG-VMTGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMK
             + +F  DG+LE VV K
Subjt:  DPRLSSPSFRPDGILEVVVMK

Q8RWL4 Increased DNA methylation 22.7e-2344.85Show/hide
Query:  GHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGV-MTGPGFLKESSAMYQMKVQQLCPPGPFTV
        G       KP V       E   G  +GL+DIG  + AYLFRV+LPGV++D      E++ +GKV + GV  TG   +K  S +++M+ + LCPPG F+V
Subjt:  GHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGV-MTGPGFLKESSAMYQMKVQQLCPPGPFTV

Query:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTV
        SF+LPGPV P   S +F  DGILE VVMK+  + TV
Subjt:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTV

Q9SYQ0 Increased DNA methylation 32.7e-3153.66Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMT-GPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV
        +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +   EI+SDGKV +EG  T G   +K  S +++M +++LCPPGPF + F LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMT-GPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMKSR
        DPRL SP+FR DGI E V+++ +
Subjt:  DPRLSSPSFRPDGILEVVVMKSR

Arabidopsis top hitse value%identityAlignment
AT1G20870.1 HSP20-like chaperones superfamily protein1.9e-3253.66Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMT-GPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV
        +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +   EI+SDGKV +EG  T G   +K  S +++M +++LCPPGPF + F LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMT-GPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMKSR
        DPRL SP+FR DGI E V+++ +
Subjt:  DPRLSSPSFRPDGILEVVVMKSR

AT1G54840.1 HSP20-like chaperones superfamily protein1.9e-2444.85Show/hide
Query:  GHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGV-MTGPGFLKESSAMYQMKVQQLCPPGPFTV
        G       KP V       E   G  +GL+DIG  + AYLFRV+LPGV++D      E++ +GKV + GV  TG   +K  S +++M+ + LCPPG F+V
Subjt:  GHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGV-MTGPGFLKESSAMYQMKVQQLCPPGPFTV

Query:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTV
        SF+LPGPV P   S +F  DGILE VVMK+  + TV
Subjt:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTV

AT1G76440.1 HSP20-like chaperones superfamily protein3.3e-3761.54Show/hide
Query:  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRL
        V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +G+V I+GV+       ++  +Y+M+VQQLCPPGPF+++F LPG VDPRL
Subjt:  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRL

Query:  SSPSFRPDGILEVVVMK
         SP+FR DGI EVVV+K
Subjt:  SSPSFRPDGILEVVVMK

AT1G76440.2 HSP20-like chaperones superfamily protein3.3e-3761.54Show/hide
Query:  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRL
        V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +G+V I+GV+       ++  +Y+M+VQQLCPPGPF+++F LPG VDPRL
Subjt:  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRL

Query:  SSPSFRPDGILEVVVMK
         SP+FR DGI EVVV+K
Subjt:  SSPSFRPDGILEVVVMK

AT1G76440.3 HSP20-like chaperones superfamily protein3.3e-3761.54Show/hide
Query:  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRL
        V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +G+V I+GV+       ++  +Y+M+VQQLCPPGPF+++F LPG VDPRL
Subjt:  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRL

Query:  SSPSFRPDGILEVVVMK
         SP+FR DGI EVVV+K
Subjt:  SSPSFRPDGILEVVVMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCCATGGCGATCAGACAATGCTGAAGCCATCAGTTATTTTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAG
TGAAGGTGCATACCTCTTTCGCGTTGCACTGCCTGGTGTGCGAAAAGATCGAAGTAAGGTAAAATTTGAGATCAAAAGCGACGGTAAGGTTCAGATTGAAGGAGTGATGA
CAGGACCAGGCTTTTTAAAAGAATCATCAGCTATGTACCAGATGAAAGTCCAGCAACTGTGTCCTCCAGGACCTTTTACGGTTTCTTTTAAGCTGCCTGGACCAGTTGAT
CCGCGGTTGTCTTCTCCTAGTTTCCGGCCTGATGGCATTCTGGAAGTGGTGGTTATGAAGTCCAGAGCACAACCTACAGTGGCCGATTCCCACTCACCACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGCCATGGCGATCAGACAATGCTGAAGCCATCAGTTATTTTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAG
TGAAGGTGCATACCTCTTTCGCGTTGCACTGCCTGGTGTGCGAAAAGATCGAAGTAAGGTAAAATTTGAGATCAAAAGCGACGGTAAGGTTCAGATTGAAGGAGTGATGA
CAGGACCAGGCTTTTTAAAAGAATCATCAGCTATGTACCAGATGAAAGTCCAGCAACTGTGTCCTCCAGGACCTTTTACGGTTTCTTTTAAGCTGCCTGGACCAGTTGAT
CCGCGGTTGTCTTCTCCTAGTTTCCGGCCTGATGGCATTCTGGAAGTGGTGGTTATGAAGTCCAGAGCACAACCTACAGTGGCCGATTCCCACTCACCACTGTGA
Protein sequenceShow/hide protein sequence
MEGHGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMTGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVD
PRLSSPSFRPDGILEVVVMKSRAQPTVADSHSPL