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Clc08G09930 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G09930
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNADH dehydrogenase subunit 7
Genome locationClcChr08:21283588..21284947
RNA-Seq ExpressionClc08G09930
SyntenyClc08G09930
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051287 - NAD binding (molecular function)
InterPro domainsIPR001135 - NADH-quinone oxidoreductase, subunit D
IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H
IPR029014 - [NiFe]-hydrogenase, large subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8362771.1 hypothetical protein BUALT_BualtUnG0042100 [Buddleja alternifolia]2.6e-5889.47Show/hide
Query:  VSRPMMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSA
        +  PMMGNYHVRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSN PYRRKIRAPG A
Subjt:  VSRPMMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSA

Query:  HSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR
        HSQGLDSMSKHHMPAD+VTIIGTQDIVSGEVDR
Subjt:  HSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR

QVJ97872.1 hypothetical protein [Apium graveolens]1.9e-5690.7Show/hide
Query:  MMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQG
        MMGNYHVRFGERWDR     +RCKLFLSIAGQMTT  SSVYSTSIHHFE YTEGFSVPA STYTAVEAPKGEFGVFLVSNGSN PYRRKIRAPGSAHSQG
Subjt:  MMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQG

Query:  LDSMSKHHMPADMVTIIGTQDIVSGEVDR
        LDSMSKHHMPAD+VTIIGTQDIVSGEVDR
Subjt:  LDSMSKHHMPADMVTIIGTQDIVSGEVDR

XP_016435338.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like [Nicotiana tabacum]7.5e-5883.8Show/hide
Query:  VNSRWGLNLVSRPMMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYR
        +N  + L+ +  P MGNYHVRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPA STYTAVEAPKGEFGVFLVSNGSN PYR
Subjt:  VNSRWGLNLVSRPMMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYR

Query:  RKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR
        RKIRAPG AHSQGLDSMSKHHMPAD+VTIIGTQDIVSGEVDR
Subjt:  RKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR

XP_018628934.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like [Nicotiana tomentosiformis]6.4e-5787.22Show/hide
Query:  VSRPMMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSA
        +  PMMGNYHVRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVP+ ST+TAVEAPKGEFGVFLVSNGSN PYRRKIRAPG A
Subjt:  VSRPMMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSA

Query:  HSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR
        HSQGLDSMSKHHMPAD+VTIIGTQDIVSGEVDR
Subjt:  HSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR

XP_022897754.1 uncharacterized protein LOC111411454 [Olea europaea var. sylvestris]7.1e-5690.62Show/hide
Query:  MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGL
        MGNYHVRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSN PYRRKIRAPG AHSQGL
Subjt:  MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGL

Query:  DSMSKHHMPADMVTIIGTQDIVSGEVDR
        DSMSKHHMPAD+VTIIGTQDIV GEVDR
Subjt:  DSMSKHHMPADMVTIIGTQDIVSGEVDR

TrEMBL top hitse value%identityAlignment
A0A151UDY3 NADH-ubiquinone oxidoreductase 49 kDa subunit4.9e-5589.84Show/hide
Query:  MGNYHVRFGERWD--RQDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGL
        MGNYHVRFGER D      +RCKLFLSIAG+MTTG SSVYSTSIHHFELYTEGFSVPA STYTAVEAPKGEFGVFLVSNGSN PYRRKIRAPGSAHSQGL
Subjt:  MGNYHVRFGERWD--RQDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGL

Query:  DSMSKHHMPADMVTIIGTQDIVSGEVDR
        DSMSKHHMPAD+VTIIGTQDIVSGEVDR
Subjt:  DSMSKHHMPADMVTIIGTQDIVSGEVDR

A0A1S3X6J4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like3.7e-5883.8Show/hide
Query:  VNSRWGLNLVSRPMMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYR
        +N  + L+ +  P MGNYHVRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPA STYTAVEAPKGEFGVFLVSNGSN PYR
Subjt:  VNSRWGLNLVSRPMMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYR

Query:  RKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR
        RKIRAPG AHSQGLDSMSKHHMPAD+VTIIGTQDIVSGEVDR
Subjt:  RKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR

A0A2G2Y7L1 Complex1_49kDa domain-containing protein2.9e-5589.06Show/hide
Query:  MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGL
        MGNYHVRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPA STYT VEAPKGEFGVFLVSNGSN PY RKIRAPG AHSQGL
Subjt:  MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGL

Query:  DSMSKHHMPADMVTIIGTQDIVSGEVDR
        DSMSKHHMPAD+VTIIGTQDIVSGEVDR
Subjt:  DSMSKHHMPADMVTIIGTQDIVSGEVDR

A0A6N2B279 Complex1_49kDa domain-containing protein8.7e-5284.5Show/hide
Query:  MMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQG
        MMGNYHVRFGERWDR     +RCKLFLSIAGQMTT  SSVYSTSIHHFE Y EGFSVP  STYT VEAPKGEFGVFLVSNGSN PYR  IRAPG AHSQG
Subjt:  MMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQG

Query:  LDSMSKHHMPADMVTIIGTQDIVSGEVDR
        L+SMSKHHMPAD+VTIIGTQDIVS EVDR
Subjt:  LDSMSKHHMPADMVTIIGTQDIVSGEVDR

D7TKS7 Complex1_49kDa domain-containing protein9.6e-5190Show/hide
Query:  GERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHM
        GERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGF VPA STYTAVEAPKGEFGVFLVSNGSN PYRRKIRAPGSAHSQGLDSMSKHHM
Subjt:  GERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHM

Query:  PADMVTIIGTQDIVSGEVDR
        PAD+VTIIGTQDIVSGEVDR
Subjt:  PADMVTIIGTQDIVSGEVDR

SwissProt top hitse value%identityAlignment
O21270 NADH-ubiquinone oxidoreductase 49 kDa subunit2.4e-3076.47Show/hide
Query:  IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR
        IHHF+LYTEG+SVP   TYTAVEAPKGEFGV+LVS+GS+ PYR KI+APG +H QGL+ MSK HM AD+VTIIGTQDIV GEVDR
Subjt:  IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR

P93306 NADH dehydrogenase [ubiquinone] iron-sulfur protein 22.4e-3875.45Show/hide
Query:  PARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGT
        P+RC++ LS+             +SIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSN PYR KIRAPG AH QGLD MSKHHM AD+VTIIGT
Subjt:  PARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGT

Query:  QDIVSGEVDR
        QDIV GEVDR
Subjt:  QDIVSGEVDR

Q36450 NADH dehydrogenase [ubiquinone] iron-sulfur protein 26.2e-3991.95Show/hide
Query:  TSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR
        +SIHHFE YTEGFSVPA STYTAVEAPKGEFGVFLVSNGSN PYRRKIRAP  AHSQGLDSMSKHHMPAD+VTIIGTQDIVSGEVDR
Subjt:  TSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR

Q37619 NADH-ubiquinone oxidoreductase 49 kDa subunit1.8e-3076.47Show/hide
Query:  IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR
        IHHF+ YT GF VPA  TYTAVEAPKGEFGV+LVSNG++ PYR KIRAPG AH QGLD M+++HM AD+VTIIGTQDIV GEVDR
Subjt:  IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR

Q9TC96 NADH dehydrogenase [ubiquinone] iron-sulfur protein 21.3e-3177.65Show/hide
Query:  IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR
        IHHF+L+TEG++VP S TYT+VEAPKGEFGV+LVSNG+N PYR KIRAPG  H QGLD MSK+HM AD+VTIIGTQDIV GEVDR
Subjt:  IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR

Arabidopsis top hitse value%identityAlignment
ATCG01110.1 NAD(P)H dehydrogenase subunit H3.0e-1246.67Show/hide
Query:  FSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR
        F +     Y  VEAPKGE G+FL+ + S  P+R KIR PG  + Q L  + K    AD++TI+G+ DI+ GEVDR
Subjt:  FSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGTQDIVSGEVDR

ATMG00510.1 NADH dehydrogenase subunit 71.1e-4380Show/hide
Query:  PARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGT
        P+RC++ LS+             +SIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSN PYRRKIRAPGSAHSQGLDSMSKHHMPAD+VTIIGT
Subjt:  PARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGT

Query:  QDIVSGEVDR
        QDIV GEVDR
Subjt:  QDIVSGEVDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGGGCTCGGAAAAATAACGAGAATCGGTGTCGTGGTGGTACTACGAGATGGCGATTTATCGGCAAGGGGAAAACATGTAGCGGCTTGCCTAGATCTCGTATTTC
CCACGTAGTCCGTCGATCAAACCAACGATTCTCTTCTCAAAGTAATAGAGAGATTCTTTTTCTTTTTCTGGCTTATCCGGGGGCAGCTGCTCTGGGGCATCCAATTCCTC
TTCTTTCTTTTCCTGCTGATCTCACATCGAGAGCAGCTCCTTCTTGTTCAGGGTCATCAGATGAGAGATCTTCCTCTGATTCCGAGAAAGGTAGATCCTTATCCGTTCAA
GTGATAGTCTTTGCCATCCGGATGTGGAAAATGATTTTGACGGGAGGAGATGGTGAAGTGTCCAATGACACATGTGTTTGGCCCCGCATTCTAAGGACAGGATCACTCAC
GGTGGCTCTTAGATGCCATGTGTTGGGCCTCCTCATTGTTGACAAAATCCATATCATCATTGGTGCCGTATTGATCCAGATAAATGTTTCACTTTCTGGGCTTTCCGGGA
GTAATTGGAGGGGTTGGGAGATTGTCGTAGAAATCATCCCACCGGAGCATGTGAACTCGAGGTGGGGGCTCAATCTCGTCTCCCGCCCTATGATGGGAAACTACCACGTT
AGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTACAGGATCATCATCGGTCTACTCTACCTCAATTCA
CCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGCAGTGGAAGCACCTAAAGGTGAATTTGGTGTCTTTCTGGTCAGTAATGGAAGCA
ATCATCCTTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATATGGTCACCATCATAGGTACT
CAAGATATTGTGTCTGGAGAGGTAGATAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGGGCTCGGAAAAATAACGAGAATCGGTGTCGTGGTGGTACTACGAGATGGCGATTTATCGGCAAGGGGAAAACATGTAGCGGCTTGCCTAGATCTCGTATTTC
CCACGTAGTCCGTCGATCAAACCAACGATTCTCTTCTCAAAGTAATAGAGAGATTCTTTTTCTTTTTCTGGCTTATCCGGGGGCAGCTGCTCTGGGGCATCCAATTCCTC
TTCTTTCTTTTCCTGCTGATCTCACATCGAGAGCAGCTCCTTCTTGTTCAGGGTCATCAGATGAGAGATCTTCCTCTGATTCCGAGAAAGGTAGATCCTTATCCGTTCAA
GTGATAGTCTTTGCCATCCGGATGTGGAAAATGATTTTGACGGGAGGAGATGGTGAAGTGTCCAATGACACATGTGTTTGGCCCCGCATTCTAAGGACAGGATCACTCAC
GGTGGCTCTTAGATGCCATGTGTTGGGCCTCCTCATTGTTGACAAAATCCATATCATCATTGGTGCCGTATTGATCCAGATAAATGTTTCACTTTCTGGGCTTTCCGGGA
GTAATTGGAGGGGTTGGGAGATTGTCGTAGAAATCATCCCACCGGAGCATGTGAACTCGAGGTGGGGGCTCAATCTCGTCTCCCGCCCTATGATGGGAAACTACCACGTT
AGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTACAGGATCATCATCGGTCTACTCTACCTCAATTCA
CCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGCAGTGGAAGCACCTAAAGGTGAATTTGGTGTCTTTCTGGTCAGTAATGGAAGCA
ATCATCCTTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATATGGTCACCATCATAGGTACT
CAAGATATTGTGTCTGGAGAGGTAGATAGATAG
Protein sequenceShow/hide protein sequence
MGGARKNNENRCRGGTTRWRFIGKGKTCSGLPRSRISHVVRRSNQRFSSQSNREILFLFLAYPGAAALGHPIPLLSFPADLTSRAAPSCSGSSDERSSSDSEKGRSLSVQ
VIVFAIRMWKMILTGGDGEVSNDTCVWPRILRTGSLTVALRCHVLGLLIVDKIHIIIGAVLIQINVSLSGLSGSNWRGWEIVVEIIPPEHVNSRWGLNLVSRPMMGNYHV
RFGERWDRQDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNHPYRRKIRAPGSAHSQGLDSMSKHHMPADMVTIIGT
QDIVSGEVDR