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Clc08G10150 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G10150
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAnkyrin repeat-containing protein
Genome locationClcChr08:21571874..21573884
RNA-Seq ExpressionClc08G10150
SyntenyClc08G10150
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026961 - PGG domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064719.1 ankyrin repeat-containing protein-like [Cucumis melo var. makuwa]8.8e-5783.22Show/hide
Query:  MVATTFIAAMAFQAGTNPPGGVWQDDDNPNYEAGKSIMATKSPQ-FINFMSGFTVCFACSAMQFMVLLDKSSGKTWSVFRSFLYFTMGSAISSIIVAYWS
        MVATTFIAAMAFQAGTNPPGGVWQDD++PNYEAGKSIMATKSP  FI+FMSG TVCFACSAMQF+VLL KSS K+WSV +SF+YFTMGS IS+I+VAYWS
Subjt:  MVATTFIAAMAFQAGTNPPGGVWQDDDNPNYEAGKSIMATKSPQ-FINFMSGFTVCFACSAMQFMVLLDKSSGKTWSVFRSFLYFTMGSAISSIIVAYWS

Query:  VIKALTPDAQMSHVIVMLKTTLLLTLVLLPISMYIEKRRLTSR
         IKALTP+AQMSHVIVMLKTTL+L++V+LPISMYIEK+RL SR
Subjt:  VIKALTPDAQMSHVIVMLKTTLLLTLVLLPISMYIEKRRLTSR

XP_008445596.1 PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo]4.8e-7179.57Show/hide
Query:  MSKQSKGGEEASVVISID-SETGNYNEDDEKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTIT
        MS+Q+ G E  SV I+ID +ETG  +E ++    +NW+ EDTDFLMVVTTFIATVAFQIGTNPPGGVWQ+DD+QGKYFAGKSIMATKSPSDFSG+LVTIT
Subjt:  MSKQSKGGEEASVVISID-SETGNYNEDDEKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTIT

Query:  ACFVFSALQFAVLFLKKWP-AAKSWSCSRFILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQ
        ACFVFSA+QFAVLFLKKWP  AK+WS SRFIL+STMGLAISSMGIAYGCSVRAYTP SEE TR VISFITMLGFP+GLAAI+LYL+
Subjt:  ACFVFSALQFAVLFLKKWP-AAKSWSCSRFILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQ

XP_011657373.1 uncharacterized protein LOC105435852 [Cucumis sativus]7.0e-7077.3Show/hide
Query:  MSKQSKGGEEASVVISIDSETGNYNEDDEKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTITA
        MS+Q+  G E SV I+ID+     +E ++    +NWM EDTDFLMVVTTFIATVAFQIGTNPPGGVWQ+DD+QGKYFAGKSIMATKSPSDF GFLVTITA
Subjt:  MSKQSKGGEEASVVISIDSETGNYNEDDEKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTITA

Query:  CFVFSALQFAVLFLKKWP-AAKSWSCSRFILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQ
        CFVFSA+QFAVLFLKKWP  AK+WS SRFIL+STMGLA+SSMG AYGCSVRAYTP SEENT  VISFITMLGFP+ LAAI++YLQ
Subjt:  CFVFSALQFAVLFLKKWP-AAKSWSCSRFILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQ

XP_016899921.1 PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo]2.7e-6678.38Show/hide
Query:  SRKVEDESKLI----KTISEKDKEDEKKKK----EEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDDNPNYEAGKSIMATKSPQ-FINFMSGFTVCFA
        SRKVEDES L     +TI+EKDKE++KKKK    E  DRDFLMVATTFIAAMAFQAGTNPPGGVWQDD++PNYEAGKSIMATKSP  FI+FMSG TVCFA
Subjt:  SRKVEDESKLI----KTISEKDKEDEKKKK----EEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDDNPNYEAGKSIMATKSPQ-FINFMSGFTVCFA

Query:  CSAMQFMVLLDKSSGKTWSVFRSFLYFTMGSAISSIIVAYWSVIKALTPDAQMSHVIVMLKTTLLLTLVLLPISMYIEKRRLTSR
        CSAMQF+VLL KSS K+WSV +SF+YFTMGS IS+I+VAYWS IKALTP+AQMSHVIVMLKTTL+L++V+LPISMYIEK+RL SR
Subjt:  CSAMQFMVLLDKSSGKTWSVFRSFLYFTMGSAISSIIVAYWSVIKALTPDAQMSHVIVMLKTTLLLTLVLLPISMYIEKRRLTSR

XP_038884181.1 uncharacterized protein LOC120075089 [Benincasa hispida]9.9e-2446.06Show/hide
Query:  SEKDKEDEKKKKEEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDDNPN---YEAGKSIMATKSP-QFINFMSGFTVCFACSAMQFMVLLDKSSGKTWS
        S KD+E+  +   E D DF+MV  TFIA +AFQAGTNPPGGVWQ+D   N   Y AGKSIM TKSP ++I FM G TVC A S +Q +V+L     K+WS
Subjt:  SEKDKEDEKKKKEEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDDNPN---YEAGKSIMATKSP-QFINFMSGFTVCFACSAMQFMVLLDKSSGKTWS

Query:  VFRSFLYFTMGSAISSIIVAYWSVIKALTPDAQMSHVIVMLKTTLLLTLVLLPISM--YIEKRRL
        + R+ LY  M   I+ ++VA+WS + ALTP   M+ +     + + ++L++LP  +  Y+ K+ L
Subjt:  VFRSFLYFTMGSAISSIIVAYWSVIKALTPDAQMSHVIVMLKTTLLLTLVLLPISM--YIEKRRL

TrEMBL top hitse value%identityAlignment
A0A0A0KGU1 PGG domain-containing protein3.4e-7077.3Show/hide
Query:  MSKQSKGGEEASVVISIDSETGNYNEDDEKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTITA
        MS+Q+  G E SV I+ID+     +E ++    +NWM EDTDFLMVVTTFIATVAFQIGTNPPGGVWQ+DD+QGKYFAGKSIMATKSPSDF GFLVTITA
Subjt:  MSKQSKGGEEASVVISIDSETGNYNEDDEKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTITA

Query:  CFVFSALQFAVLFLKKWP-AAKSWSCSRFILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQ
        CFVFSA+QFAVLFLKKWP  AK+WS SRFIL+STMGLA+SSMG AYGCSVRAYTP SEENT  VISFITMLGFP+ LAAI++YLQ
Subjt:  CFVFSALQFAVLFLKKWP-AAKSWSCSRFILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQ

A0A1S3BD33 uncharacterized protein LOC1034885762.3e-7179.57Show/hide
Query:  MSKQSKGGEEASVVISID-SETGNYNEDDEKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTIT
        MS+Q+ G E  SV I+ID +ETG  +E ++    +NW+ EDTDFLMVVTTFIATVAFQIGTNPPGGVWQ+DD+QGKYFAGKSIMATKSPSDFSG+LVTIT
Subjt:  MSKQSKGGEEASVVISID-SETGNYNEDDEKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTIT

Query:  ACFVFSALQFAVLFLKKWP-AAKSWSCSRFILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQ
        ACFVFSA+QFAVLFLKKWP  AK+WS SRFIL+STMGLAISSMGIAYGCSVRAYTP SEE TR VISFITMLGFP+GLAAI+LYL+
Subjt:  ACFVFSALQFAVLFLKKWP-AAKSWSCSRFILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQ

A0A1S4DVA8 uncharacterized protein LOC1079907051.3e-6678.38Show/hide
Query:  SRKVEDESKLI----KTISEKDKEDEKKKK----EEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDDNPNYEAGKSIMATKSPQ-FINFMSGFTVCFA
        SRKVEDES L     +TI+EKDKE++KKKK    E  DRDFLMVATTFIAAMAFQAGTNPPGGVWQDD++PNYEAGKSIMATKSP  FI+FMSG TVCFA
Subjt:  SRKVEDESKLI----KTISEKDKEDEKKKK----EEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDDNPNYEAGKSIMATKSPQ-FINFMSGFTVCFA

Query:  CSAMQFMVLLDKSSGKTWSVFRSFLYFTMGSAISSIIVAYWSVIKALTPDAQMSHVIVMLKTTLLLTLVLLPISMYIEKRRLTSR
        CSAMQF+VLL KSS K+WSV +SF+YFTMGS IS+I+VAYWS IKALTP+AQMSHVIVMLKTTL+L++V+LPISMYIEK+RL SR
Subjt:  CSAMQFMVLLDKSSGKTWSVFRSFLYFTMGSAISSIIVAYWSVIKALTPDAQMSHVIVMLKTTLLLTLVLLPISMYIEKRRLTSR

A0A5A7VAU9 Ankyrin repeat-containing protein2.3e-7179.57Show/hide
Query:  MSKQSKGGEEASVVISID-SETGNYNEDDEKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTIT
        MS+Q+ G E  SV I+ID +ETG  +E ++    +NW+ EDTDFLMVVTTFIATVAFQIGTNPPGGVWQ+DD+QGKYFAGKSIMATKSPSDFSG+LVTIT
Subjt:  MSKQSKGGEEASVVISID-SETGNYNEDDEKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTIT

Query:  ACFVFSALQFAVLFLKKWP-AAKSWSCSRFILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQ
        ACFVFSA+QFAVLFLKKWP  AK+WS SRFIL+STMGLAISSMGIAYGCSVRAYTP SEE TR VISFITMLGFP+GLAAI+LYL+
Subjt:  ACFVFSALQFAVLFLKKWP-AAKSWSCSRFILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQ

A0A5D3BRK9 Ankyrin repeat-containing protein-like4.3e-5783.22Show/hide
Query:  MVATTFIAAMAFQAGTNPPGGVWQDDDNPNYEAGKSIMATKSPQ-FINFMSGFTVCFACSAMQFMVLLDKSSGKTWSVFRSFLYFTMGSAISSIIVAYWS
        MVATTFIAAMAFQAGTNPPGGVWQDD++PNYEAGKSIMATKSP  FI+FMSG TVCFACSAMQF+VLL KSS K+WSV +SF+YFTMGS IS+I+VAYWS
Subjt:  MVATTFIAAMAFQAGTNPPGGVWQDDDNPNYEAGKSIMATKSPQ-FINFMSGFTVCFACSAMQFMVLLDKSSGKTWSVFRSFLYFTMGSAISSIIVAYWS

Query:  VIKALTPDAQMSHVIVMLKTTLLLTLVLLPISMYIEKRRLTSR
         IKALTP+AQMSHVIVMLKTTL+L++V+LPISMYIEK+RL SR
Subjt:  VIKALTPDAQMSHVIVMLKTTLLLTLVLLPISMYIEKRRLTSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34050.1 Ankyrin repeat family protein9.3e-0428.48Show/hide
Query:  EKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTITACFVFSALQFAVLFLKKWPAAKSWSCSRF
        E K  +  +    + + +V   IA+VAF  G NPPGGV+Q+   +GK  AG++ +A +  S  +   +  + C V   L  +++  +  P       +  
Subjt:  EKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTITACFVFSALQFAVLFLKKWPAAKSWSCSRF

Query:  ILFSTMGLAISSMGIAYGCSVRAYTPKSEENT---RNVISFIT-MLGFPLGLAAITLY
        IL+    +A++SM +AY  +     P  E        V+S  T MLG   GL A   Y
Subjt:  ILFSTMGLAISSMGIAYGCSVRAYTPKSEENT---RNVISFIT-MLGFPLGLAAITLY

AT3G13950.1 unknown protein8.4e-0546.34Show/hide
Query:  KKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDD
        K+  +W+ +    LMV  T IA ++FQ+  NPPGGVWQ D+
Subjt:  KKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDD

AT4G13266.1 unknown protein4.2e-0458.82Show/hide
Query:  EGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDD
        E  R  L+VA T IAAM+F    NPPGGVWQ +D
Subjt:  EGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDD

AT5G50140.1 Ankyrin repeat family protein5.4e-0427.62Show/hide
Query:  EKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTITACFVFSALQFAVLFLKKWP-AAKSWSCSR
        EK+  S  +    + + VV   IA+V F  G NPPGGV+QD    GK  AG ++        F  F V+  +  +F++L   +L L   P   KS     
Subjt:  EKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTITACFVFSALQFAVLFLKKWP-AAKSWSCSR

Query:  FILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQ-----SRKVEDESKLIKTISEKDK
         I    + LA+ +M  AY        P S  N   + + + +    LG   I L+ +     SRK +    ++  I   +K
Subjt:  FILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQ-----SRKVEDESKLIKTISEKDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAACAGAGCAAGGGAGGTGAAGAAGCATCAGTAGTAATATCAATAGATTCTGAAACTGGGAATTACAATGAAGATGATGAGAAGAAGAAGGTGAGCAATTGGAT
GACAGAAGACACAGATTTTCTGATGGTAGTAACAACATTCATCGCAACCGTTGCTTTCCAAATAGGGACAAACCCACCCGGCGGCGTATGGCAAGATGACGATGAACAGG
GGAAGTACTTTGCAGGCAAATCCATAATGGCTACAAAATCCCCTTCTGATTTCAGTGGCTTCTTGGTAACCATTACGGCTTGTTTTGTATTCTCAGCCTTGCAATTTGCT
GTTCTGTTTCTTAAGAAATGGCCTGCAGCCAAGAGTTGGTCATGTTCCAGGTTCATTCTCTTCTCAACTATGGGATTGGCTATTTCTTCTATGGGTATTGCTTATGGCTG
TTCCGTAAGAGCTTATACACCCAAATCAGAGGAAAATACTCGAAACGTTATCTCTTTTATTACTATGCTCGGATTCCCTCTTGGTTTGGCCGCCATTACACTTTACCTCC
AGTCAAGAAAGGTAGAAGATGAATCAAAACTGATCAAAACCATAAGTGAAAAGGACAAAGAAGATGAGAAGAAGAAGAAAGAAGAAGGGGATAGGGATTTTCTAATGGTA
GCAACAACGTTCATTGCAGCCATGGCTTTCCAAGCTGGGACGAACCCTCCCGGCGGCGTATGGCAAGACGATGACAACCCAAACTACGAAGCAGGCAAATCCATAATGGC
TACAAAATCTCCTCAATTCATCAATTTCATGAGCGGCTTTACAGTATGTTTTGCATGCTCAGCGATGCAATTTATGGTCTTGTTGGATAAGTCATCTGGCAAAACTTGGT
CGGTTTTTAGGAGTTTTCTTTACTTCACGATGGGCTCTGCAATATCATCCATCATTGTTGCTTATTGGTCCGTCATAAAAGCTTTAACGCCTGACGCTCAAATGTCTCAT
GTCATTGTTATGCTCAAAACCACCCTTCTACTTACACTTGTTTTGCTGCCAATTTCAATGTATATAGAGAAGAGACGACTTACGTCTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAACAGAGCAAGGGAGGTGAAGAAGCATCAGTAGTAATATCAATAGATTCTGAAACTGGGAATTACAATGAAGATGATGAGAAGAAGAAGGTGAGCAATTGGAT
GACAGAAGACACAGATTTTCTGATGGTAGTAACAACATTCATCGCAACCGTTGCTTTCCAAATAGGGACAAACCCACCCGGCGGCGTATGGCAAGATGACGATGAACAGG
GGAAGTACTTTGCAGGCAAATCCATAATGGCTACAAAATCCCCTTCTGATTTCAGTGGCTTCTTGGTAACCATTACGGCTTGTTTTGTATTCTCAGCCTTGCAATTTGCT
GTTCTGTTTCTTAAGAAATGGCCTGCAGCCAAGAGTTGGTCATGTTCCAGGTTCATTCTCTTCTCAACTATGGGATTGGCTATTTCTTCTATGGGTATTGCTTATGGCTG
TTCCGTAAGAGCTTATACACCCAAATCAGAGGAAAATACTCGAAACGTTATCTCTTTTATTACTATGCTCGGATTCCCTCTTGGTTTGGCCGCCATTACACTTTACCTCC
AGTCAAGAAAGGTAGAAGATGAATCAAAACTGATCAAAACCATAAGTGAAAAGGACAAAGAAGATGAGAAGAAGAAGAAAGAAGAAGGGGATAGGGATTTTCTAATGGTA
GCAACAACGTTCATTGCAGCCATGGCTTTCCAAGCTGGGACGAACCCTCCCGGCGGCGTATGGCAAGACGATGACAACCCAAACTACGAAGCAGGCAAATCCATAATGGC
TACAAAATCTCCTCAATTCATCAATTTCATGAGCGGCTTTACAGTATGTTTTGCATGCTCAGCGATGCAATTTATGGTCTTGTTGGATAAGTCATCTGGCAAAACTTGGT
CGGTTTTTAGGAGTTTTCTTTACTTCACGATGGGCTCTGCAATATCATCCATCATTGTTGCTTATTGGTCCGTCATAAAAGCTTTAACGCCTGACGCTCAAATGTCTCAT
GTCATTGTTATGCTCAAAACCACCCTTCTACTTACACTTGTTTTGCTGCCAATTTCAATGTATATAGAGAAGAGACGACTTACGTCTCGTTAG
Protein sequenceShow/hide protein sequence
MSKQSKGGEEASVVISIDSETGNYNEDDEKKKVSNWMTEDTDFLMVVTTFIATVAFQIGTNPPGGVWQDDDEQGKYFAGKSIMATKSPSDFSGFLVTITACFVFSALQFA
VLFLKKWPAAKSWSCSRFILFSTMGLAISSMGIAYGCSVRAYTPKSEENTRNVISFITMLGFPLGLAAITLYLQSRKVEDESKLIKTISEKDKEDEKKKKEEGDRDFLMV
ATTFIAAMAFQAGTNPPGGVWQDDDNPNYEAGKSIMATKSPQFINFMSGFTVCFACSAMQFMVLLDKSSGKTWSVFRSFLYFTMGSAISSIIVAYWSVIKALTPDAQMSH
VIVMLKTTLLLTLVLLPISMYIEKRRLTSR