; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G10320 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G10320
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description60S ribosomal protein L17
Genome locationClcChr08:21678647..21683190
RNA-Seq ExpressionClc08G10320
SyntenyClc08G10320
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005721 - Ribosomal protein L22/L17, eukaryotic/archaeal
IPR036394 - Ribosomal protein L22/L17 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF47481.1 protein with unknown function [Ricinus communis]8.3e-4242.19Show/hide
Query:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYV-ELAEPAMKTGRFWL----------ELHVYIYLLIRHPRVSTRVIADYVRVQG--FVEF
        +LEEVWV VLNITGPLSSWS AD+KLPAP  +  G PL+Y+  L+  +    RFWL          EL V   +L    +    +  D+    G  +++ 
Subjt:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYV-ELAEPAMKTGRFWL----------ELHVYIYLLIRHPRVSTRVIADYVRVQG--FVEF

Query:  VPSLLINLIQAFPF-LRSRPNPTFLTK-LEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLW
               +I    F +R +    F  K L+ A + +VKYSREP+NPT + +ARGSDLRVHFKNTRETA A+RK    + +         +    F     
Subjt:  VPSLLINLIQAFPF-LRSRPNPTFLTK-LEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLW

Query:  WCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH--PSKPSSETKASY-----------LPC-----------SWKNQPRR
                K+RHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVD A  ISH   ++   + + +Y            PC           + + +P  
Subjt:  WCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH--PSKPSSETKASY-----------LPC-----------SWKNQPRR

Query:  LRLATGKPKKGQAIRSGASS
            + KPKK QA+RSGASS
Subjt:  LRLATGKPKKGQAIRSGASS

KAG0488191.1 hypothetical protein HPP92_007002 [Vanilla planifolia]5.8e-4347.81Show/hide
Query:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYV-ELAEPAMKTGRFWLE------LHVYIYLLIRHPRVST----RVIADYVRVQGFVEFVP
        S++EVW TVLNITGPLS+WSFAD+KLPAP  S  G PL+Y+  L+  + +  +FWLE      L + + +L +H    T    R+   +  +  F  F+ 
Subjt:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYV-ELAEPAMKTGRFWLE------LHVYIYLLIRHPRVST----RVIADYVRVQGFVEFVP

Query:  SL--LINLIQAFPFLRSRPNPTFLTKLEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWC
        S     NL    PFL              AA+ MVKYSREP NPT + +A G DLRVHFKNTRETAHAIRK    + +         +    F       
Subjt:  SL--LINLIQAFPFLRSRPNPTFLTKLEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWC

Query:  WTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH
              K RHSNGQGRWPVKSA+FILDLLKNAESNA+VKGLDVD A  ISH
Subjt:  WTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH

KAG0489860.1 hypothetical protein HPP92_006723 [Vanilla planifolia]9.8e-4342.72Show/hide
Query:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYV-ELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQ-----GFVEFVPSLLIN
        S++EVW TVLNITGPLS+WSFAD+KLPAP  S  G PL+Y+  L+  + +  +FWLE +    L I    +   ++ +  R++     G          N
Subjt:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYV-ELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQ-----GFVEFVPSLLIN

Query:  LIQAFPFLRSRPNPTFLTKLEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGK
        L    PFL              AA+ MVKYSREP NPT + +A G DLRVHFKNTRETAHAIRK    + +         +    F             K
Subjt:  LIQAFPFLRSRPNPTFLTKLEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGK

Query:  DRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH--PSKPSSETKASY-----------LPC------SWKNQPRR----LRLATGKPKK
         RHSNGQGRWPVKSA+FILDLLKNAESNA+VKGLDVD A  ISH   ++   + + +Y            PC      S K +P +     ++AT KP+K
Subjt:  DRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH--PSKPSSETKASY-----------LPC------SWKNQPRR----LRLATGKPKK

Query:  GQAIRSGAS
         QA+R+G S
Subjt:  GQAIRSGAS

PNX91963.1 60S ribosomal protein l17-2-like [Trifolium pratense]3.9e-3945.23Show/hide
Query:  PSISLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQGFVEFVPSLLINLIQ
        P  SLEE+WV VLNITGPLSSWSFAD+ LP       G P   + L+ P+ +   FWLE +    L +    +  +++    R++               
Subjt:  PSISLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQGFVEFVPSLLINLIQ

Query:  AFPFLRSRPNPTFLTKLEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRH
         FP     P         + +  MVKYSREPDNPT + +ARG+DLRVHFKNTRETA AIRK    + +         +    F             K+RH
Subjt:  AFPFLRSRPNPTFLTKLEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRH

Query:  SNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH
        SNGQGRWP KSAKFILDLLKNAESNAEVKGLDVD A  +SH
Subjt:  SNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH

RXH72289.1 hypothetical protein DVH24_033827 [Malus domestica]8.4e-3443.29Show/hide
Query:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQGFVEFVPSLLINLIQAFP
        SLEEVWVTV+NITGPLSSWSFAD+ LPA   +  G P     L+  + +   FWLE                                            
Subjt:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQGFVEFVPSLLINLIQAFP

Query:  FLRSRPNPTFLTKLEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCHC-QGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNG
                             VKYSREPDN T + +ARGSDLRVHFKNTRETA +IRK    + +         +    F             K+RHSNG
Subjt:  FLRSRPNPTFLTKLEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCHC-QGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNG

Query:  QGRWPVKSAKFILDLLKNAESNAEVKGLDVD
        QGRWPVKSAKFILDLLKNAESNAEVKGLDVD
Subjt:  QGRWPVKSAKFILDLLKNAESNAEVKGLDVD

TrEMBL top hitse value%identityAlignment
A0A2K3MMB6 60S ribosomal protein l17-2-like1.9e-3945.23Show/hide
Query:  PSISLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQGFVEFVPSLLINLIQ
        P  SLEE+WV VLNITGPLSSWSFAD+ LP       G P   + L+ P+ +   FWLE +    L +    +  +++    R++               
Subjt:  PSISLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQGFVEFVPSLLINLIQ

Query:  AFPFLRSRPNPTFLTKLEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRH
         FP     P         + +  MVKYSREPDNPT + +ARG+DLRVHFKNTRETA AIRK    + +         +    F             K+RH
Subjt:  AFPFLRSRPNPTFLTKLEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRH

Query:  SNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH
        SNGQGRWP KSAKFILDLLKNAESNAEVKGLDVD A  +SH
Subjt:  SNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH

A0A2N9FGJ3 Uncharacterized protein3.3e-4444.87Show/hide
Query:  PSISLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQGFVEFVPSLLINLIQ
        P+ SL+EVWVTVLNITGPLSSWSFAD+ LPAP     G P     L+  + +   FWLE      L     RV   V+     + G  + + SL  + + 
Subjt:  PSISLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQGFVEFVPSLLINLIQ

Query:  AFP---FLRSRPNPTFLTKL--EVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCS
          P       R N T   +L     +  MVKYSREPDNPT + +ARGSDLRVHFKNTRETA AIRK    + +         +    F            
Subjt:  AFP---FLRSRPNPTFLTKL--EVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCS

Query:  GKDRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH--PSKPSSETKASY-----------LPC------SWKNQPRR----LRLATGKP
         K RHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVD +  ISH   ++   + + +Y            PC      S K +P +     +LAT K 
Subjt:  GKDRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH--PSKPSSETKASY-----------LPC------SWKNQPRR----LRLATGKP

Query:  KKGQAIRSGASS
        KK QA+RSGASS
Subjt:  KKGQAIRSGASS

A0A498HMW5 Peptidase_M28 domain-containing protein4.0e-3443.29Show/hide
Query:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQGFVEFVPSLLINLIQAFP
        SLEEVWVTV+NITGPLSSWSFAD+ LPA   +  G P     L+  + +   FWLE                                            
Subjt:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQGFVEFVPSLLINLIQAFP

Query:  FLRSRPNPTFLTKLEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCHC-QGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNG
                             VKYSREPDN T + +ARGSDLRVHFKNTRETA +IRK    + +         +    F             K+RHSNG
Subjt:  FLRSRPNPTFLTKLEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCHC-QGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNG

Query:  QGRWPVKSAKFILDLLKNAESNAEVKGLDVD
        QGRWPVKSAKFILDLLKNAESNAEVKGLDVD
Subjt:  QGRWPVKSAKFILDLLKNAESNAEVKGLDVD

A0A6J1BRY8 60S ribosomal protein L17-2-like2.0e-3353.26Show/hide
Query:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNPT + +ARGSDLRVHFKNTRETAHAIRK    + +         +    F             K+RHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDFAPRISH--PSKPSSETKASY-----------LPC------SWKNQPRR----LRLATGKPKKGQAIRSGASS
        SNAEVKGLDVD    +SH   ++   + + +Y            PC      S K +P +     +LATGKPKKGQAIRSGASS
Subjt:  SNAEVKGLDVDFAPRISH--PSKPSSETKASY-----------LPC------SWKNQPRR----LRLATGKPKKGQAIRSGASS

B9RMF8 Peptidase_M28 domain-containing protein4.0e-4242.19Show/hide
Query:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYV-ELAEPAMKTGRFWL----------ELHVYIYLLIRHPRVSTRVIADYVRVQG--FVEF
        +LEEVWV VLNITGPLSSWS AD+KLPAP  +  G PL+Y+  L+  +    RFWL          EL V   +L    +    +  D+    G  +++ 
Subjt:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYV-ELAEPAMKTGRFWL----------ELHVYIYLLIRHPRVSTRVIADYVRVQG--FVEF

Query:  VPSLLINLIQAFPF-LRSRPNPTFLTK-LEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLW
               +I    F +R +    F  K L+ A + +VKYSREP+NPT + +ARGSDLRVHFKNTRETA A+RK    + +         +    F     
Subjt:  VPSLLINLIQAFPF-LRSRPNPTFLTK-LEVAAVAMVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLW

Query:  WCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH--PSKPSSETKASY-----------LPC-----------SWKNQPRR
                K+RHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVD A  ISH   ++   + + +Y            PC           + + +P  
Subjt:  WCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDFAPRISH--PSKPSSETKASY-----------LPC-----------SWKNQPRR

Query:  LRLATGKPKKGQAIRSGASS
            + KPKK QA+RSGASS
Subjt:  LRLATGKPKKGQAIRSGASS

SwissProt top hitse value%identityAlignment
O48557 60S ribosomal protein L174.3e-2557.66Show/hide
Query:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EP NPT + +A G DLRVHFKNTRETA A+RK    + +         +    F             K RHSNGQGRWPVKSA+FILDLLKNAE
Subjt:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVD
        SNA+VKGLDVD
Subjt:  SNAEVKGLDVD

P35266 60S ribosomal protein L17-15.3e-2352.71Show/hide
Query:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH------------CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSA
        MVKYS +P NPT + +A G DLRVHFKNTRETA A+RK                 Q +P    C   G +              K+R  NGQGRWP KSA
Subjt:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH------------CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSA

Query:  KFILDLLKNAESNAEVKGLDVDFAPRISH
        KF+LDLLKNAESNAEVKGLDVD A  ISH
Subjt:  KFILDLLKNAESNAEVKGLDVDFAPRISH

P35267 60S ribosomal protein L17-21.2e-2251.64Show/hide
Query:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH------------CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSA
        MVKYSR+P NPT + +A G DLRVHFKNTRETA A+R+                 Q +P    C   G +              K+R  NGQGRWP KSA
Subjt:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH------------CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSA

Query:  KFILDLLKNAESNAEVKGLDVD
        +F+LDLLKNAESNAEVKGLDVD
Subjt:  KFILDLLKNAESNAEVKGLDVD

P51413 60S ribosomal protein L17-21.2e-2760.17Show/hide
Query:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN T + +ARGSDLRVHFKNTRETAHAIRK    + +         +    F             K+RHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDFAPRISH
        SNAEVKGLDVD A  ISH
Subjt:  SNAEVKGLDVDFAPRISH

Q93VI3 60S ribosomal protein L17-14.6e-2759.32Show/hide
Query:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCHC-QGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN T + +ARG+DLRVHFKNTRETAHAIRK    + +         +    F             K+RHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCHC-QGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDFAPRISH
        SNAEVKGLDVD A  ISH
Subjt:  SNAEVKGLDVDFAPRISH

Arabidopsis top hitse value%identityAlignment
AT1G27400.1 Ribosomal protein L22p/L17e family protein3.3e-2859.32Show/hide
Query:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCHC-QGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN T + +ARG+DLRVHFKNTRETAHAIRK    + +         +    F             K+RHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCHC-QGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDFAPRISH
        SNAEVKGLDVD A  ISH
Subjt:  SNAEVKGLDVDFAPRISH

AT1G67420.1 Zn-dependent exopeptidases superfamily protein4.8e-1157.14Show/hide
Query:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLE
        SLEE+WVTVLNITGPLS WSFAD K PAP     G P   + L+  + +   FWLE
Subjt:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLE

AT1G67420.2 Zn-dependent exopeptidases superfamily protein4.8e-1157.14Show/hide
Query:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLE
        SLEE+WVTVLNITGPLS WSFAD K PAP     G P   + L+  + +   FWLE
Subjt:  SLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLE

AT1G67430.1 Ribosomal protein L22p/L17e family protein8.6e-2960.17Show/hide
Query:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN T + +ARGSDLRVHFKNTRETAHAIRK    + +         +    F             K+RHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDFAPRISH
        SNAEVKGLDVD A  ISH
Subjt:  SNAEVKGLDVDFAPRISH

AT1G67430.2 Ribosomal protein L22p/L17e family protein1.3e-2457.14Show/hide
Query:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN T + +ARGSDLRVHFKNTRETAHAIRK    + +         +    F             K+RHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNPT-NLQARGSDLRVHFKNTRETAHAIRKCH-CQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEV
        SNAE+
Subjt:  SNAEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGCTGATCCATCTATTTCCTTGGAGGAGGTTTGGGTCACAGTTCTCAACATCACTGGGCCTTTATCAAGTTGGTCATTTGCTGACAGTAAGCTTCCAGCACCGAG
AAACTCGACGGTGGGCCGCCCTCTTACATATGTAGAGTTAGCGGAGCCAGCAATGAAAACTGGAAGATTCTGGCTAGAGCTTCATGTCTACATATACCTTCTGATTCGTC
ATCCGCGCGTCTCCACAAGAGTTATAGCTGATTACGTTCGGGTTCAGGGTTTTGTAGAGTTTGTCCCCTCTCTTCTTATAAACCTAATTCAAGCATTTCCCTTCCTCCGT
TCACGGCCAAATCCAACTTTTCTCACCAAACTCGAAGTTGCAGCCGTCGCCATGGTGAAGTATTCCAGGGAACCAGACAATCCTACCAACCTGCAAGCCCGTGGCTCGGA
CCTCAGAGTTCACTTTAAGAACACAAGGGAAACTGCACATGCTATCAGAAAGTGCCACTGCCAAGGCCAAGAGGTACCTAGAGGATGTGCTTGCCCACAAACAGGCCATT
CCTTTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAAAGACAGGCATTCCAATGGTCAAGGACGTTGGCCTGTCAAATCTGCAAAGTTTATTCTAGATTTG
CTTAAGAATGCTGAGAGCAATGCTGAAGTTAAGGGTCTGGATGTTGATTTTGCTCCACGTATCTCACATCCAAGTAAACCAAGCTCAGAAACAAAGGCGTCGTACCTACC
GTGCTCATGGAAGAATCAACCCCGGAGACTCAGGCTGGCGACTGGCAAACCTAAGAAAGGTCAAGCAATCCGTAGTGGCGCTTCCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCGCTGATCCATCTATTTCCTTGGAGGAGGTTTGGGTCACAGTTCTCAACATCACTGGGCCTTTATCAAGTTGGTCATTTGCTGACAGTAAGCTTCCAGCACCGAG
AAACTCGACGGTGGGCCGCCCTCTTACATATGTAGAGTTAGCGGAGCCAGCAATGAAAACTGGAAGATTCTGGCTAGAGCTTCATGTCTACATATACCTTCTGATTCGTC
ATCCGCGCGTCTCCACAAGAGTTATAGCTGATTACGTTCGGGTTCAGGGTTTTGTAGAGTTTGTCCCCTCTCTTCTTATAAACCTAATTCAAGCATTTCCCTTCCTCCGT
TCACGGCCAAATCCAACTTTTCTCACCAAACTCGAAGTTGCAGCCGTCGCCATGGTGAAGTATTCCAGGGAACCAGACAATCCTACCAACCTGCAAGCCCGTGGCTCGGA
CCTCAGAGTTCACTTTAAGAACACAAGGGAAACTGCACATGCTATCAGAAAGTGCCACTGCCAAGGCCAAGAGGTACCTAGAGGATGTGCTTGCCCACAAACAGGCCATT
CCTTTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAAAGACAGGCATTCCAATGGTCAAGGACGTTGGCCTGTCAAATCTGCAAAGTTTATTCTAGATTTG
CTTAAGAATGCTGAGAGCAATGCTGAAGTTAAGGGTCTGGATGTTGATTTTGCTCCACGTATCTCACATCCAAGTAAACCAAGCTCAGAAACAAAGGCGTCGTACCTACC
GTGCTCATGGAAGAATCAACCCCGGAGACTCAGGCTGGCGACTGGCAAACCTAAGAAAGGTCAAGCAATCCGTAGTGGCGCTTCCTCTTGA
Protein sequenceShow/hide protein sequence
MTADPSISLEEVWVTVLNITGPLSSWSFADSKLPAPRNSTVGRPLTYVELAEPAMKTGRFWLELHVYIYLLIRHPRVSTRVIADYVRVQGFVEFVPSLLINLIQAFPFLR
SRPNPTFLTKLEVAAVAMVKYSREPDNPTNLQARGSDLRVHFKNTRETAHAIRKCHCQGQEVPRGCACPQTGHSFPSLLWWCWTNCSGKDRHSNGQGRWPVKSAKFILDL
LKNAESNAEVKGLDVDFAPRISHPSKPSSETKASYLPCSWKNQPRRLRLATGKPKKGQAIRSGASS