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Clc08G10370 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G10370
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProteasome subunit beta
Genome locationClcChr08:21717058..21717572
RNA-Seq ExpressionClc08G10370
SyntenyClc08G10370
Gene Ontology termsGO:0010498 - proteasomal protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0019774 - proteasome core complex, beta-subunit complex (cellular component)
GO:0004298 - threonine-type endopeptidase activity (molecular function)
InterPro domainsIPR001353 - Proteasome, subunit alpha/beta
IPR029055 - Nucleophile aminohydrolases, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647235.1 hypothetical protein Csa_018934 [Cucumis sativus]1.7e-2897.14Show/hide
Query:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        ME +EGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Subjt:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
XP_004144192.1 proteasome subunit beta type-5 [Cucumis sativus]1.7e-2897.14Show/hide
Query:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        ME +EGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Subjt:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
XP_008445492.1 PREDICTED: proteasome subunit beta type-5 [Cucumis melo]1.0e-2898.57Show/hide
Query:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        ME LEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Subjt:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
XP_022961789.1 proteasome subunit beta type-5-like [Cucurbita moschata]2.3e-2897.14Show/hide
Query:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        ME +EGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Subjt:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
XP_038883961.1 proteasome subunit beta type-5 isoform X1 [Benincasa hispida]1.0e-2898.57Show/hide
Query:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        ME LEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Subjt:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
TrEMBL top hitse value%identityAlignment
A0A0A0KDM0 Proteasome subunit beta8.3e-2997.14Show/hide
Query:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        ME +EGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Subjt:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
A0A1S3BCV3 Proteasome subunit beta4.9e-2998.57Show/hide
Query:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        ME LEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Subjt:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
A0A5A7VGZ1 Proteasome subunit beta4.9e-2998.57Show/hide
Query:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        ME LEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Subjt:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
A0A6J1HF19 Proteasome subunit beta1.1e-2897.14Show/hide
Query:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        ME +EGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Subjt:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
A0A6J1KAW4 Proteasome subunit beta1.1e-2897.14Show/hide
Query:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        ME +EGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Subjt:  MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
SwissProt top hitse value%identityAlignment
O23717 Proteasome subunit beta type-5-A1.4e-2071.01Show/hide
Query:  EVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        ++L+  ++ PSF++P + +FDGFQK A  M+K AKGTTTLAFIFK GVMVAADSRASMGGYISSQSVKK
Subjt:  EVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
O24361 Proteasome subunit beta type-55.4e-2580.88Show/hide
Query:  VLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        V +G    PSF++PN +DFDGFQK+A+QMVKPAKGTTTLAFIFK GVMVAADSRASMGGYISSQSVKK
Subjt:  VLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
P28074 Proteasome subunit beta type-51.5e-0650Show/hide
Query:  AAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        AAP + +P        ++  I+M+    GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK
Subjt:  AAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Q5R8S2 Proteasome subunit beta type-51.5e-0650Show/hide
Query:  AAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        AAP + +P        ++  I+M+    GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK
Subjt:  AAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Q9LIP2 Proteasome subunit beta type-5-B9.8e-2782.61Show/hide
Query:  EVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        E+L+GF++APSF++P ++DFDGFQK A++MVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Subjt:  EVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Arabidopsis top hitse value%identityAlignment
AT1G13060.1 20S proteasome beta subunit E19.8e-2271.01Show/hide
Query:  EVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        ++L+  ++ PSF++P + +FDGFQK A  M+K AKGTTTLAFIFK GVMVAADSRASMGGYISSQSVKK
Subjt:  EVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
AT1G13060.2 20S proteasome beta subunit E11.2e-1964.29Show/hide
Query:  EVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKN
        ++L+  ++ PSF++P + +FDGFQK A  M+K AKGTTTLAFIFK GVMVAADSRASMGGYIS  S+K +
Subjt:  EVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKN
AT3G26340.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein7.0e-2882.61Show/hide
Query:  EVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
        E+L+GF++APSF++P ++DFDGFQK A++MVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK
Subjt:  EVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTTCTGGAAGGGTTTGCAGCTGCTCCATCCTTTGAGATCCCTAATTCCAGTGACTTTGATGGCTTTCAGAAAGATGCCATTCAAATGGTAAAGCCAGCAAAAGG
AACAACCACACTGGCTTTCATTTTTAAGGAAGGAGTCATGGTTGCTGCTGACTCCCGTGCCAGCATGGGAGGCTATATATCCTCACAATCTGTGAAAAAAAATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTTCTGGAAGGGTTTGCAGCTGCTCCATCCTTTGAGATCCCTAATTCCAGTGACTTTGATGGCTTTCAGAAAGATGCCATTCAAATGGTAAAGCCAGCAAAAGG
AACAACCACACTGGCTTTCATTTTTAAGGAAGGAGTCATGGTTGCTGCTGACTCCCGTGCCAGCATGGGAGGCTATATATCCTCACAATCTGTGAAAAAAAATTATTGA
Protein sequenceShow/hide protein sequence
MEVLEGFAAAPSFEIPNSSDFDGFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKNY