; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G10490 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G10490
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionclp protease adapter protein ClpF, chloroplastic
Genome locationClcChr08:21808250..21812294
RNA-Seq ExpressionClc08G10490
SyntenyClc08G10490
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009840 - chloroplastic endopeptidase Clp complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR001943 - UVR domain
IPR011722 - Hemimethylated DNA-binding domain
IPR036623 - Hemimethylated DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064751.1 UvrB/uvrC motif-containing protein isoform 1 [Cucumis melo var. makuwa]3.5e-16582.41Show/hide
Query:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLS  A+TALGDP VYGSALS RRN K+FKQTSLTQLTSRQCFWHQ  RSFSLTSQP RSKRG+FKI+AGWLFKGGGQE G RIERSENANNDILIF
Subjt:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLNIIRLR                                  ADL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL

Query:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
        QKA+ESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
Subjt:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD

Query:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD
        PDLLVAY         VAEENLL PEEPDTERFDHPY+SFLFYGVD+AGDFIPIKQLREKYNRPRHE+PFDPQDDEQ+GDD
Subjt:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD

KAG7029563.1 Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-15579.63Show/hide
Query:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTS-LTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILI
        MVQDLS  ALTALGDPKVYGS LS R+N   FKQTS  T LTSRQ FWHQ  RSFSL SQP RSKRGNFK+KAGWLF+GGGQ L ARIERSENANNDILI
Subjt:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTS-LTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILI

Query:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSAD
        FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVE E+IKQQESKRGLTSKSEVQDKGL+IIRLR                                  AD
Subjt:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSAD

Query:  LQKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT
        LQKA+ESENY  AAQLRD+ISKLETESLAASAKVLAYESAEYSFRLGQK RHKIFGY GVICGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT
Subjt:  LQKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT

Query:  DPDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQRGDD
        +PDLLVAY         VAEENLLVPEEPDTERFDHPYNSFLFYGVD+AGDFIP+KQLREKYNRPRHEVP+DPQ DDEQRGDD
Subjt:  DPDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQRGDD

XP_004144184.1 clp protease adapter protein ClpF, chloroplastic isoform X1 [Cucumis sativus]4.8e-16281.89Show/hide
Query:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLS  A+TALGDP VYGSALS RRNFK+FKQTSLTQLTSRQCFWHQ  RSFSLTSQP RSKRG+FKI+AGWLFKGGGQE G RIERSENANNDILIF
Subjt:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAE+IKQQESK+GLTSKSEVQDKGLNIIRLR                                  ADL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL

Query:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
        QKAVESENYALAAQLRDEISKLET+SLAASAKVLAYESAEYSFRLGQKVRHKIFGY GVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
Subjt:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD

Query:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD
        PDLLVAY         VAEENLL PEEPDTERFDHPY+SFLFYGVD+AGDFIPIKQLREKYNRPR+EVPF  +DDEQ+GDD
Subjt:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD

XP_008445473.1 PREDICTED: uncharacterized protein LOC103488481 [Cucumis melo]2.7e-16582.68Show/hide
Query:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLS  A+TALGDP VYGSALS RRN K+FKQTSLTQLTSRQCFWHQ  RSFSLTSQP RSKRG+FKI+AGWLFKGGGQE G RIERSENANNDILIF
Subjt:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLNIIRLR                                  ADL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL

Query:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
        QKA+ESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
Subjt:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD

Query:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD
        PDLLVAY         VAEENLL PEEPDTERFDHPY+SFLFYGVD+AGDFIPIKQLREKYNRPRHEVPFDPQDDEQ+GDD
Subjt:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD

XP_038886599.1 clp protease adapter protein ClpF, chloroplastic [Benincasa hispida]4.5e-16884.51Show/hide
Query:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLS  ALTALGDPKVYGSALS RRNFKHFKQTSLTQLTSRQCFW+Q  RSFSLTSQP   KRGNFK+KAGWLFKGGGQELG RIERSENANNDILIF
Subjt:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL
        FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLR                                  ADL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL

Query:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
        QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
Subjt:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD

Query:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD
        PDLLVAY         VAEENLLVPEEPD E FDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPR+EVPFDPQDDEQRGDD
Subjt:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD

TrEMBL top hitse value%identityAlignment
A0A0A0KD67 YccV-like domain-containing protein2.3e-16281.89Show/hide
Query:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLS  A+TALGDP VYGSALS RRNFK+FKQTSLTQLTSRQCFWHQ  RSFSLTSQP RSKRG+FKI+AGWLFKGGGQE G RIERSENANNDILIF
Subjt:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAE+IKQQESK+GLTSKSEVQDKGLNIIRLR                                  ADL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL

Query:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
        QKAVESENYALAAQLRDEISKLET+SLAASAKVLAYESAEYSFRLGQKVRHKIFGY GVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
Subjt:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD

Query:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD
        PDLLVAY         VAEENLL PEEPDTERFDHPY+SFLFYGVD+AGDFIPIKQLREKYNRPR+EVPF  +DDEQ+GDD
Subjt:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD

A0A1S3BCC1 uncharacterized protein LOC1034884811.3e-16582.68Show/hide
Query:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLS  A+TALGDP VYGSALS RRN K+FKQTSLTQLTSRQCFWHQ  RSFSLTSQP RSKRG+FKI+AGWLFKGGGQE G RIERSENANNDILIF
Subjt:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLNIIRLR                                  ADL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL

Query:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
        QKA+ESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
Subjt:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD

Query:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD
        PDLLVAY         VAEENLL PEEPDTERFDHPY+SFLFYGVD+AGDFIPIKQLREKYNRPRHEVPFDPQDDEQ+GDD
Subjt:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD

A0A5A7VGB7 UvrB/uvrC motif-containing protein isoform 11.7e-16582.41Show/hide
Query:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLS  A+TALGDP VYGSALS RRN K+FKQTSLTQLTSRQCFWHQ  RSFSLTSQP RSKRG+FKI+AGWLFKGGGQE G RIERSENANNDILIF
Subjt:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLNIIRLR                                  ADL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL

Query:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
        QKA+ESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGY GV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
Subjt:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD

Query:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD
        PDLLVAY         VAEENLL PEEPDTERFDHPY+SFLFYGVD+AGDFIPIKQLREKYNRPRHE+PFDPQDDEQ+GDD
Subjt:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD

A0A6J1HFJ3 clp protease adapter protein ClpF, chloroplastic1.0e-15479.37Show/hide
Query:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTS-LTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILI
        MVQDLS  ALTALGDPKVYGS LS R+N   FKQTS  T LTSRQ FWHQ  RSFSL SQP R KRGNFK+KAGWLF+GGGQ L ARIERSENANNDILI
Subjt:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTS-LTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILI

Query:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSAD
        FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVE E+IKQQESKRGLTSKSEVQDKGL+IIRLR                                  AD
Subjt:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSAD

Query:  LQKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT
        LQKA+ESENY  AAQLRD+ISKLETESLAASAKVLAYESAEYSFRLGQK RHKIFGY GVICGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT
Subjt:  LQKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT

Query:  DPDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQRGDD
        +PDLLVAY         VAEENLLVPEEPDTERFDHPYNSFLFYGVD+AGDFIP+KQLREKYNRPRHEVP+DPQ DDEQRGDD
Subjt:  DPDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQRGDD

A0A6J1KAU5 clp protease adapter protein ClpF, chloroplastic isoform X24.7e-15578.8Show/hide
Query:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLS  +LT+LGDPKVYGS LS R N   FKQTS T LTSRQ FWHQ  RSFSL SQP RSKRGNFK+KAGWLF+GGGQ L ARIERSENANNDILIF
Subjt:  MVQDLS--ALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL
        FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAE+IKQQESKRGLTSKSEVQDKGL+IIRLR                                  ADL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADL

Query:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD
        QKA+ESENY  AAQLRD+ISKLETESLAASAKVLAYESAEY+FRLGQK +HKIFGY GVICGMDPVCCE+SSWMEIAQVEKLSRGSNQPFYQVLVDVRT+
Subjt:  QKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTD

Query:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQRGDD
        PDLLVAY         VAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIP++QLREKYNRPRHEVP+D Q DDEQRGDD
Subjt:  PDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQRGDD

SwissProt top hitse value%identityAlignment
O94952 F-box only protein 217.0e-0731.93Show/hide
Query:  FRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLF
        + +G  ++HK +GY  VI G DP C     W+    V  L  G +QPFY VLV            E  S  Y   A+ENL    EP  +   HP +   +
Subjt:  FRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLF

Query:  YGVDTAGDFIPIKQLREKY
        +   T   +IP  +L  +Y
Subjt:  YGVDTAGDFIPIKQLREKY

Q5R5S1 F-box only protein 217.0e-0731.93Show/hide
Query:  FRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLF
        + +G  ++HK +GY  VI G DP C     W+    V  L  G +QPFY VLV            E  S  Y   A+ENL    EP  +   HP +   +
Subjt:  FRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLF

Query:  YGVDTAGDFIPIKQLREKY
        +   T   +IP  +L  +Y
Subjt:  YGVDTAGDFIPIKQLREKY

Q67Y99 Clp protease adapter protein ClpF, chloroplastic2.7e-10758.98Show/hide
Query:  QDLSALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQE-LGARIERSENANNDILIFFFQ
        Q LS LT  G  KV  S L  R N    K +SL       C + + + SF    +  + +R   +++A W F+GGG++ L    ERSE+AN DILIFFFQ
Subjt:  QDLSALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQE-LGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADLQKA
        LDLATRVQYA+N+EQY+IAQ+LR KLTEVE E I+ QE KRG ++KSE QDKG++IIRLR                                  ADLQ A
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADLQKA

Query:  VESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDL
        ++SE+Y LAA+LRDEISKLE ESLA SAK LA+E AEY+FRLGQK+RHK FGY  V+CGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDL
Subjt:  VESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDL

Query:  LVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE
        LVAY         VAE+NLL PE+PD ERFDHPY SFL+YG DTAGDFIP+KQLREKYNRPRHEVPFD QD++
Subjt:  LVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE

Q8VDH1 F-box only protein 211.2e-0629.71Show/hide
Query:  ESLAASAKVLAYES-AEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYEFSSIFYDAVAEENLL
        E +    K+ + E   +  + +G  ++HK +GY  VI G DP C     W+    V  L  G +QPFY VLV            E  S  Y   A+ENL 
Subjt:  ESLAASAKVLAYES-AEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYEFSSIFYDAVAEENLL

Query:  VPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKY
           EP  +   HP +   ++   T   +IP  +L  +Y
Subjt:  VPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKY

Arabidopsis top hitse value%identityAlignment
AT2G03390.1 uvrB/uvrC motif-containing protein1.9e-10858.98Show/hide
Query:  QDLSALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQE-LGARIERSENANNDILIFFFQ
        Q LS LT  G  KV  S L  R N    K +SL       C + + + SF    +  + +R   +++A W F+GGG++ L    ERSE+AN DILIFFFQ
Subjt:  QDLSALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQE-LGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADLQKA
        LDLATRVQYA+N+EQY+IAQ+LR KLTEVE E I+ QE KRG ++KSE QDKG++IIRLR                                  ADLQ A
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADLQKA

Query:  VESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDL
        ++SE+Y LAA+LRDEISKLE ESLA SAK LA+E AEY+FRLGQK+RHK FGY  V+CGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDL
Subjt:  VESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDL

Query:  LVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE
        LVAY         VAE+NLL PE+PD ERFDHPY SFL+YG DTAGDFIP+KQLREKYNRPRHEVPFD QD++
Subjt:  LVAYEFSSIFYDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE

AT2G03390.2 uvrB/uvrC motif-containing protein9.8e-8964.64Show/hide
Query:  LNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADLQKAVESENYALAA
        +N+EQY+IAQ+LR KLTEVE E I+ QE KRG ++KSE QDKG++IIRLR                                  ADLQ A++SE+Y LAA
Subjt:  LNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADLQKAVESENYALAA

Query:  QLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYEFSSIF
        +LRDEISKLE ESLA SAK LA+E AEY+FRLGQK+RHK FGY  V+CGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAY      
Subjt:  QLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYEFSSIF

Query:  YDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE
           VAE+NLL PE+PD ERFDHPY SFL+YG DTAGDFIP+KQLREKYNRPRHEVPFD QD++
Subjt:  YDAVAEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGGATTTATCAGCTTTGACAGCCTTGGGAGATCCAAAGGTTTATGGATCAGCTCTTTCAGGGAGGAGGAATTTCAAGCATTTCAAGCAGACTAGTCTA
ACCCAATTAACTTCCAGGCAATGCTTTTGGCATCAATCCACGCGAAGCTTTTCCTTAACTAGCCAACCCTTTAGATCAAAACGAGGAAATTTTAAGATTAAAGCT
GGCTGGTTGTTTAAAGGAGGTGGACAAGAGTTGGGTGCTCGTATAGAGCGCAGTGAAAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCA
ACACGAGTACAATATGCATTGAACATTGAGCAGTATGAAATTGCCCAAGAATTGAGAACGAAGCTAACCGAGGTTGAAGCAGAAATCATCAAGCAGCAAGAATCA
AAAAGGGGGTTAACTTCAAAGAGCGAAGTTCAAGACAAAGGTTTAAATATCATTCGTTTACGGTATAGTCTCACTTATATTATACCCATGTTGTACGTTGGCATA
TTTGAACTGCTTGATCTCACTCTCAGGTATTTGTTGCCTTTTCCCATCTCTTTTTACAGCGCAGATTTGCAGAAGGCTGTTGAAAGTGAAAATTATGCTTTGGCT
GCACAACTGCGGGATGAAATTTCCAAATTGGAAACTGAGTCCCTAGCTGCATCAGCAAAAGTTCTGGCTTACGAGAGTGCTGAATATAGTTTTAGATTGGGACAG
AAAGTGAGGCACAAAATTTTTGGATACACAGGTGTGATTTGTGGAATGGATCCTGTGTGCTGTGAATCAAGTTCTTGGATGGAGATAGCACAAGTTGAAAAATTA
TCTCGAGGTTCTAATCAGCCATTCTATCAGGTTTTAGTAGACGTTCGTACAGACCCAGATTTGCTGGTTGCATATGAATTTTCTTCTATATTTTATGATGCAGTT
GCCGAGGAAAATCTTCTTGTTCCCGAAGAACCAGATACGGAGAGGTTTGATCATCCGTATAATTCCTTCTTATTCTATGGAGTGGATACAGCCGGGGATTTCATT
CCTATAAAGCAACTGCGGGAGAAGTACAATCGTCCTCGACACGAAGTTCCTTTTGATCCTCAAGATGATGAGCAACGTGGTGATGATTGA
mRNA sequenceShow/hide mRNA sequence
CTGAAACTCAATTTTCGCCCGTTGTGGTTGTAAACAAAATTGGTTCTCATCGCTTTTCCTTTTCCGGCAGCTCTCAGTAGTCAACCTTTGAGCGGAAGCTGATCA
CACTTTGCAGATGCGAAGATCTTCTATTGAGAGGTAGAGGAAGAAGGATACGATTTTCTTCTTCAATCAGGGACCGGTATCTGCCTGTTTAGCAGAAATGGTGCA
GGATTTATCAGCTTTGACAGCCTTGGGAGATCCAAAGGTTTATGGATCAGCTCTTTCAGGGAGGAGGAATTTCAAGCATTTCAAGCAGACTAGTCTAACCCAATT
AACTTCCAGGCAATGCTTTTGGCATCAATCCACGCGAAGCTTTTCCTTAACTAGCCAACCCTTTAGATCAAAACGAGGAAATTTTAAGATTAAAGCTGGCTGGTT
GTTTAAAGGAGGTGGACAAGAGTTGGGTGCTCGTATAGAGCGCAGTGAAAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGT
ACAATATGCATTGAACATTGAGCAGTATGAAATTGCCCAAGAATTGAGAACGAAGCTAACCGAGGTTGAAGCAGAAATCATCAAGCAGCAAGAATCAAAAAGGGG
GTTAACTTCAAAGAGCGAAGTTCAAGACAAAGGTTTAAATATCATTCGTTTACGGTATAGTCTCACTTATATTATACCCATGTTGTACGTTGGCATATTTGAACT
GCTTGATCTCACTCTCAGGTATTTGTTGCCTTTTCCCATCTCTTTTTACAGCGCAGATTTGCAGAAGGCTGTTGAAAGTGAAAATTATGCTTTGGCTGCACAACT
GCGGGATGAAATTTCCAAATTGGAAACTGAGTCCCTAGCTGCATCAGCAAAAGTTCTGGCTTACGAGAGTGCTGAATATAGTTTTAGATTGGGACAGAAAGTGAG
GCACAAAATTTTTGGATACACAGGTGTGATTTGTGGAATGGATCCTGTGTGCTGTGAATCAAGTTCTTGGATGGAGATAGCACAAGTTGAAAAATTATCTCGAGG
TTCTAATCAGCCATTCTATCAGGTTTTAGTAGACGTTCGTACAGACCCAGATTTGCTGGTTGCATATGAATTTTCTTCTATATTTTATGATGCAGTTGCCGAGGA
AAATCTTCTTGTTCCCGAAGAACCAGATACGGAGAGGTTTGATCATCCGTATAATTCCTTCTTATTCTATGGAGTGGATACAGCCGGGGATTTCATTCCTATAAA
GCAACTGCGGGAGAAGTACAATCGTCCTCGACACGAAGTTCCTTTTGATCCTCAAGATGATGAGCAACGTGGTGATGATTGATTGACGCACATCTTTAGAAATCC
GTCAACACCTTCCTTAAAATGGTTTGTTCATCTCATTTCTTCCAGTCCTTTAATTCTCCCCTTGTGTGGTAGGTTTCCTCCATATTCATTGATTTTCAGGAGACT
TCATGAAACTTGATAATTGAAAATTCTGAATCAATGTTGTACATGTTATAGAACATAGCATCTCGTAATCTTCTTTTACGTTGCGTTGGTACCGAATTTCAATAG
CTTGAACAGCTGAAGATCAATATTAATCAATCAACTGCC
Protein sequenceShow/hide protein sequence
MVQDLSALTALGDPKVYGSALSGRRNFKHFKQTSLTQLTSRQCFWHQSTRSFSLTSQPFRSKRGNFKIKAGWLFKGGGQELGARIERSENANNDILIFFFQLDLA
TRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRYSLTYIIPMLYVGIFELLDLTLRYLLPFPISFYSADLQKAVESENYALA
AQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYTGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYEFSSIFYDAV
AEENLLVPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQRGDD