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Clc08G11090 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G11090
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:22370245..22376138
RNA-Seq ExpressionClc08G11090
SyntenyClc08G11090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585278.1 hypothetical protein SDJN03_18011, partial [Cucurbita argyrosperma subsp. sororia]6.4e-0776.09Show/hide
Query:  VCQNLFSEWLSSITIQYNTVQRSLAMHEIPARDKKHERQLQLTKFL
        VCQNLFSE L+S      T+QRSLAMHEIPARDKKHE QLQLTK L
Subjt:  VCQNLFSEWLSSITIQYNTVQRSLAMHEIPARDKKHERQLQLTKFL
KAG7029608.1 hypothetical protein SDJN02_07948, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-1644.44Show/hide
Query:  MKTRKTTTPLEELGCTRSQPRNQSPSAQPEVQASLSRFRNAAFRILLPYSVTSSDFGAVSCARAPMELEGSPGNSAENPRILHKFLVFLPYDIEACALLK
        MKTRKTTTPLEEL CTR+           ++  +L++    A  I L  S+ S       C  A + +                                
Subjt:  MKTRKTTTPLEELGCTRSQPRNQSPSAQPEVQASLSRFRNAAFRILLPYSVTSSDFGAVSCARAPMELEGSPGNSAENPRILHKFLVFLPYDIEACALLK

Query:  GLGSCLRSGVCQNLFSEWLSSITIQYNTVQRSLAMHEIPARDKKHERQLQLTK
        GL SCLRSGV QNLFS  L+SITIQY+TVQRSLAMHE+PARDKKHE+QLQL+K
Subjt:  GLGSCLRSGVCQNLFSEWLSSITIQYNTVQRSLAMHEIPARDKKHERQLQLTK
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACGAGGAAGACGACGACTCCATTAGAAGAGCTCGGTTGCACAAGAAGTCAGCCACGCAATCAATCCCCGTCGGCCCAACCCGAGGTTCAAGCAAGCCTTTCCAG
ATTTCGAAACGCCGCGTTCCGCATTCTCCTTCCCTATTCCGTTACGTCCTCCGATTTCGGCGCTGTTTCTTGTGCTCGTGCTCCCATGGAACTGGAAGGCTCTCCTGGAA
ACTCTGCTGAAAATCCTCGTATTCTTCACAAATTTCTGGTATTTCTGCCATATGACATAGAGGCGTGTGCTTTGCTTAAAGGGCTAGGGAGCTGTTTGCGATCAGGCGTT
TGCCAGAACTTGTTCTCTGAATGGCTGTCCTCTATTACAATACAATACAATACAGTACAGCGAAGCCTGGCTATGCATGAAATTCCTGCAAGAGACAAAAAGCATGAGAG
ACAGTTGCAACTTACAAAATTTCTTTTTTCTTTTGGCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACGAGGAAGACGACGACTCCATTAGAAGAGCTCGGTTGCACAAGAAGTCAGCCACGCAATCAATCCCCGTCGGCCCAACCCGAGGTTCAAGCAAGCCTTTCCAG
ATTTCGAAACGCCGCGTTCCGCATTCTCCTTCCCTATTCCGTTACGTCCTCCGATTTCGGCGCTGTTTCTTGTGCTCGTGCTCCCATGGAACTGGAAGGCTCTCCTGGAA
ACTCTGCTGAAAATCCTCGTATTCTTCACAAATTTCTGGTATTTCTGCCATATGACATAGAGGCGTGTGCTTTGCTTAAAGGGCTAGGGAGCTGTTTGCGATCAGGCGTT
TGCCAGAACTTGTTCTCTGAATGGCTGTCCTCTATTACAATACAATACAATACAGTACAGCGAAGCCTGGCTATGCATGAAATTCCTGCAAGAGACAAAAAGCATGAGAG
ACAGTTGCAACTTACAAAATTTCTTTTTTCTTTTGGCCTTTGA
Protein sequenceShow/hide protein sequence
MKTRKTTTPLEELGCTRSQPRNQSPSAQPEVQASLSRFRNAAFRILLPYSVTSSDFGAVSCARAPMELEGSPGNSAENPRILHKFLVFLPYDIEACALLKGLGSCLRSGV
CQNLFSEWLSSITIQYNTVQRSLAMHEIPARDKKHERQLQLTKFLFSFGL