; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G11310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G11310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionWW domain-containing protein
Genome locationClcChr08:22610366..22611581
RNA-Seq ExpressionClc08G11310
SyntenyClc08G11310
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001202 - WW domain
IPR036020 - WW domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652131.1 hypothetical protein Csa_021889 [Cucumis sativus]6.3e-9283.81Show/hide
Query:  MVPFQPHPSSLNDN-TSTIREPADNLAKKRKWEES-IPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEK--DDDDKE
        MVPFQ HPSSLND  TS I+EPADNLAKKRKWEES IPT PL+S+ DIELHLETPLPFYWQRCLDIQSGKIHFYN TTQKRTWKDPRDK+EK  DDDD+E
Subjt:  MVPFQPHPSSLNDN-TSTIREPADNLAKKRKWEES-IPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEK--DDDDKE

Query:  DDHSYNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNN-KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPA
        DD+ Y+    DMSLDLELNLTCES +KNNN+QT+QG RRAIN+GM+FG SENYN+NNN KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQT+PA
Subjt:  DDHSYNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNN-KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPA

Query:  MFKRRCHLSW
        M KRRCHLSW
Subjt:  MFKRRCHLSW

XP_004152643.1 uncharacterized protein LOC101203360 [Cucumis sativus]6.3e-9283.81Show/hide
Query:  MVPFQPHPSSLNDN-TSTIREPADNLAKKRKWEES-IPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEK--DDDDKE
        MVPFQ HPSSLND  TS I+EPADNLAKKRKWEES IPT PL+S+ DIELHLETPLPFYWQRCLDIQSGKIHFYN TTQKRTWKDPRDK+EK  DDDD+E
Subjt:  MVPFQPHPSSLNDN-TSTIREPADNLAKKRKWEES-IPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEK--DDDDKE

Query:  DDHSYNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNN-KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPA
        DD+ Y+    DMSLDLELNLTCES +KNNN+QT+QG RRAIN+GM+FG SENYN+NNN KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQT+PA
Subjt:  DDHSYNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNN-KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPA

Query:  MFKRRCHLSW
        M KRRCHLSW
Subjt:  MFKRRCHLSW

XP_008444823.1 PREDICTED: uncharacterized protein LOC103488058 [Cucumis melo]1.8e-9183.1Show/hide
Query:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEES-IPT-SPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDK-VEKDDDDKE-
        MVPFQ HPSSLND TS I+EPADNLAKKRKWEES +PT  PL+S+ DIELHLETPLPFYWQRCLDIQSGKIHFYN TTQKRTW+DPRDK V+KDDDD + 
Subjt:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEES-IPT-SPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDK-VEKDDDDKE-

Query:  ---DDHSYNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNN-KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQT
           DD  Y+    DMSLDLELNLTCES DKNNNNQT+QG RRAINNGM+FG SENYNNNNN KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQT
Subjt:  ---DDHSYNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNN-KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQT

Query:  TPAMFKRRCHLSW
        +PAM KRRCHLSW
Subjt:  TPAMFKRRCHLSW

XP_023002678.1 uncharacterized protein LOC111496462 [Cucurbita maxima]1.2e-7473.66Show/hide
Query:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHS
        MVPFQ HPSSLND  S +R+P++NLAKKRKWE+ +    ++SIFDIELHLETPLPF WQRCLDIQSGKIHFYNTTTQKRT KDPRDK++ DDD + D+  
Subjt:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHS

Query:  YNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPAMFKRR
            + DMSLDLELNLTCES DK NNNQT QGGRRAI  G +FGSSENY     + EMVAAVCMRCHLLVM+CKSSPECPNCKF+NS PEQT+PAM KRR
Subjt:  YNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPAMFKRR

Query:  CHLSW
        C+LSW
Subjt:  CHLSW

XP_038885611.1 sodium/hydrogen exchanger 1-like [Benincasa hispida]1.2e-9887.92Show/hide
Query:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHS
        MVPFQPHPSSLND TS I+E ADNLAKKRKWEES PT+PL+S+FDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDK+EKDD+ ++DD  
Subjt:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHS

Query:  YNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENY-NNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNS-PPEQTTPAMFK
         N ED DMSLDLELNLTCES DKNNNNQ IQGGR+AINNGMIFGSSENY NNNNNKAEMVAAVCMRCHLLVM+CKSSPECPNCKFMNS PPEQT+PAMFK
Subjt:  YNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENY-NNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNS-PPEQTTPAMFK

Query:  RRCHLSW
        RRCHLSW
Subjt:  RRCHLSW

TrEMBL top hitse value%identityAlignment
A0A0A0LNT8 WW domain-containing protein3.0e-9283.81Show/hide
Query:  MVPFQPHPSSLNDN-TSTIREPADNLAKKRKWEES-IPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEK--DDDDKE
        MVPFQ HPSSLND  TS I+EPADNLAKKRKWEES IPT PL+S+ DIELHLETPLPFYWQRCLDIQSGKIHFYN TTQKRTWKDPRDK+EK  DDDD+E
Subjt:  MVPFQPHPSSLNDN-TSTIREPADNLAKKRKWEES-IPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEK--DDDDKE

Query:  DDHSYNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNN-KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPA
        DD+ Y+    DMSLDLELNLTCES +KNNN+QT+QG RRAIN+GM+FG SENYN+NNN KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQT+PA
Subjt:  DDHSYNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNN-KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPA

Query:  MFKRRCHLSW
        M KRRCHLSW
Subjt:  MFKRRCHLSW

A0A1S3BAS4 uncharacterized protein LOC1034880588.9e-9283.1Show/hide
Query:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEES-IPT-SPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDK-VEKDDDDKE-
        MVPFQ HPSSLND TS I+EPADNLAKKRKWEES +PT  PL+S+ DIELHLETPLPFYWQRCLDIQSGKIHFYN TTQKRTW+DPRDK V+KDDDD + 
Subjt:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEES-IPT-SPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDK-VEKDDDDKE-

Query:  ---DDHSYNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNN-KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQT
           DD  Y+    DMSLDLELNLTCES DKNNNNQT+QG RRAINNGM+FG SENYNNNNN KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQT
Subjt:  ---DDHSYNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNN-KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQT

Query:  TPAMFKRRCHLSW
        +PAM KRRCHLSW
Subjt:  TPAMFKRRCHLSW

A0A5A7VAF4 WW domain-containing protein8.9e-9283.1Show/hide
Query:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEES-IPT-SPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDK-VEKDDDDKE-
        MVPFQ HPSSLND TS I+EPADNLAKKRKWEES +PT  PL+S+ DIELHLETPLPFYWQRCLDIQSGKIHFYN TTQKRTW+DPRDK V+KDDDD + 
Subjt:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEES-IPT-SPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDK-VEKDDDDKE-

Query:  ---DDHSYNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNN-KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQT
           DD  Y+    DMSLDLELNLTCES DKNNNNQT+QG RRAINNGM+FG SENYNNNNN KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQT
Subjt:  ---DDHSYNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNN-KAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQT

Query:  TPAMFKRRCHLSW
        +PAM KRRCHLSW
Subjt:  TPAMFKRRCHLSW

A0A6J1GKF5 uncharacterized protein LOC1114547304.6e-7272.2Show/hide
Query:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHS
        MVPFQ  PSSLND    +R  ++NLAKKRKWE+ +    ++SIFD+ELHLETPLPF WQRCLDIQSGKIHFYNTTTQKRT KDPRDK++ DDD + D+  
Subjt:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHS

Query:  YNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPAMFKRR
            D DMSLDLELNLTCES DK NNNQT QGGRRAI  G +FGSSENY     + EMVAAVCMRCHLLVM+CKSSPECPNCKF+NS PEQT+PAM KRR
Subjt:  YNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPAMFKRR

Query:  CHLSW
        C+LSW
Subjt:  CHLSW

A0A6J1KU99 uncharacterized protein LOC1114964625.8e-7573.66Show/hide
Query:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHS
        MVPFQ HPSSLND  S +R+P++NLAKKRKWE+ +    ++SIFDIELHLETPLPF WQRCLDIQSGKIHFYNTTTQKRT KDPRDK++ DDD + D+  
Subjt:  MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHS

Query:  YNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPAMFKRR
            + DMSLDLELNLTCES DK NNNQT QGGRRAI  G +FGSSENY     + EMVAAVCMRCHLLVM+CKSSPECPNCKF+NS PEQT+PAM KRR
Subjt:  YNGEDIDMSLDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPAMFKRR

Query:  CHLSW
        C+LSW
Subjt:  CHLSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22250.1 unknown protein5.4e-0954.55Show/hide
Query:  NNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTT
        ++N  K EM+  VCM+CH+LVMLCKS+  CPNCKFM+     +T
Subjt:  NNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTT

AT1G78170.1 unknown protein3.1e-1231.89Show/hide
Query:  SSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHSYNGEDIDMSLDLELNLT-CESPDKNN---------NNQTI
        S  FD ELHL TPLP  WQ           +  T+ + R +  P+D V              G+   MSLDLELNL+   SP +           +N+T+
Subjt:  SSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHSYNGEDIDMSLDLELNLT-CESPDKNN---------NNQTI

Query:  QGGR-RAINN----------------GMIFGSSENYNNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPAMFK
           + + + N                 + F   ++ + ++   EMV  VCM+CH+LVMLC S+P CPNCKFM+ P + ++  +FK
Subjt:  QGGR-RAINN----------------GMIFGSSENYNNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPAMFK

AT2G33510.1 CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202)5.6e-0624.28Show/hide
Query:  SLNDNTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHSYNGEDIDMS
        SLND     R   D   +    E   P S  +    +EL+    LP +W++CLD+++G+I++ N     R  +DPR  +  D D  +   +   E+    
Subjt:  SLNDNTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHSYNGEDIDMS

Query:  LDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNC
         D E + +  SP    N++  +               E       +  +V A C  C +  M+ K   +CP C
Subjt:  LDLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNC

AT4G08910.1 unknown protein1.2e-1133.6Show/hide
Query:  MSLDLELNLTCESPDKNNNN---------QTIQGGRRAINNGMIFGSSENYN-------------------NNNNKAEMVAAVCMRCHLLVMLCKSSPEC
        MSLDLELNL+    D N+++         +  +  ++ +  G + G     +                      ++ EMVA VCM+CH+LVMLCK+SP C
Subjt:  MSLDLELNLTCESPDKNNNN---------QTIQGGRRAINNGMIFGSSENYN-------------------NNNNKAEMVAAVCMRCHLLVMLCKSSPEC

Query:  PNCKFMNSPPEQTTPAMFKRRCHLS
        PNCKFM+SP + +   +F  +  LS
Subjt:  PNCKFMNSPPEQTTPAMFKRRCHLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCCTTTCAACCCCACCCTTCTTCTCTAAATGACAATACATCAACAATTAGAGAGCCTGCAGATAATTTAGCAAAGAAGAGGAAGTGGGAAGAGTCGATCCCGAC
ATCACCGTTGAGCTCCATATTCGATATCGAGCTCCACCTTGAAACTCCATTACCTTTTTACTGGCAAAGGTGTCTTGACATTCAGTCCGGAAAGATACACTTTTACAACA
CGACAACTCAAAAGAGAACATGGAAAGATCCGAGGGACAAGGTCGAGAAAGACGATGACGACAAGGAAGATGACCACAGCTACAACGGTGAGGATATCGACATGAGTTTG
GACCTTGAACTCAACTTGACTTGTGAATCGCCGGACAAGAACAACAATAATCAAACAATACAAGGCGGGCGTCGAGCTATAAATAATGGAATGATTTTCGGGTCGTCGGA
AAATTACAATAACAACAACAATAAGGCGGAGATGGTGGCGGCCGTTTGCATGAGGTGCCATTTGTTAGTGATGCTGTGTAAATCTTCGCCGGAGTGTCCTAACTGTAAAT
TTATGAACTCTCCGCCGGAGCAGACCACGCCGGCGATGTTCAAGCGCCGGTGTCATCTTTCTTGGTAA
mRNA sequenceShow/hide mRNA sequence
CCCCATTCCAAACACAACCATTGAATTTGAAGCTATGGTTCCCTTTCAACCCCACCCTTCTTCTCTAAATGACAATACATCAACAATTAGAGAGCCTGCAGATAATTTAG
CAAAGAAGAGGAAGTGGGAAGAGTCGATCCCGACATCACCGTTGAGCTCCATATTCGATATCGAGCTCCACCTTGAAACTCCATTACCTTTTTACTGGCAAAGGTGTCTT
GACATTCAGTCCGGAAAGATACACTTTTACAACACGACAACTCAAAAGAGAACATGGAAAGATCCGAGGGACAAGGTCGAGAAAGACGATGACGACAAGGAAGATGACCA
CAGCTACAACGGTGAGGATATCGACATGAGTTTGGACCTTGAACTCAACTTGACTTGTGAATCGCCGGACAAGAACAACAATAATCAAACAATACAAGGCGGGCGTCGAG
CTATAAATAATGGAATGATTTTCGGGTCGTCGGAAAATTACAATAACAACAACAATAAGGCGGAGATGGTGGCGGCCGTTTGCATGAGGTGCCATTTGTTAGTGATGCTG
TGTAAATCTTCGCCGGAGTGTCCTAACTGTAAATTTATGAACTCTCCGCCGGAGCAGACCACGCCGGCGATGTTCAAGCGCCGGTGTCATCTTTCTTGGTAATTAAAGTG
GTAATTATATTATATTAATTATAAAATTAGGAGGAAATGAAAAACTCATAATTATATAATTATTCTCTTTAATTGTAACTTGTATGTGTAGGATGACTCAATTACCTTTC
TTCTTTTATTGGTGTTATCGTTATCAAACTTTTTCCCTCTCTTATTAAAAATATATAAAAAAAAAATGGAAAAAAAATTGGGGGAGGTTTGTTTTGTGTGTATATATATA
TACAAATTGGTGTTTTATTTGTCACAAATATTGAAAAGTTGATTTCAAATTGAGTTGTCGGTTGAGGGAC
Protein sequenceShow/hide protein sequence
MVPFQPHPSSLNDNTSTIREPADNLAKKRKWEESIPTSPLSSIFDIELHLETPLPFYWQRCLDIQSGKIHFYNTTTQKRTWKDPRDKVEKDDDDKEDDHSYNGEDIDMSL
DLELNLTCESPDKNNNNQTIQGGRRAINNGMIFGSSENYNNNNNKAEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPPEQTTPAMFKRRCHLSW