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Clc08G11340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G11340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMultifunctional methyltransferase subunit TRM112-like protein
Genome locationClcChr08:22629634..22632505
RNA-Seq ExpressionClc08G11340
SyntenyClc08G11340
Gene Ontology termsGO:0018364 - peptidyl-glutamine methylation (biological process)
GO:0030488 - tRNA methylation (biological process)
GO:0070476 - rRNA (guanine-N7)-methylation (biological process)
GO:0008168 - methyltransferase activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR005651 - Trm112-like
IPR039127 - Multifunctional methyltransferase subunit Trm112


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065150.1 multifunctional methyltransferase subunit TRM112-like protein [Cucumis melo var. makuwa]1.2e-6673.26Show/hide
Query:  LFSSGCNHGAQPPFTPLPPF----------------------GRQKRRPASFER--------SEKMRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVD
        LFS G +HGAQPPF P PPF                       R  R    + R         EKMRLLTHNMLSSNIKGV+NGFPLRIEVEKVVEK VD
Subjt:  LFSSGCNHGAQPPFTPLPPF----------------------GRQKRRPASFER--------SEKMRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVD

Query:  FNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHEDEV
        FNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEA+ASMLDSHDFLQRFHHALLELHLEEGALICPET RRFPVNKGIPN+LLHEDEV
Subjt:  FNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHEDEV

XP_022953415.1 multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X2 [Cucurbita moschata]5.3e-6297.54Show/hide
Query:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP
        MRLLTHNMLSSNIKGVVNGFPLR+EVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAE+ MLDSHDFLQRFHHALLELHLEEGALICP
Subjt:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ETGRRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

XP_022991525.1 multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X2 [Cucurbita maxima]4.1e-6298.36Show/hide
Query:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP
        MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAE+S LDSHDFLQRFHHALLELHLEEGALICP
Subjt:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ETGRRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

XP_023548932.1 multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucurbita pepo subsp. pepo]8.2e-6399.18Show/hide
Query:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP
        MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAE+SMLDSHDFLQRFHHALLELHLEEGALICP
Subjt:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ETGRRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

XP_038885364.1 multifunctional methyltransferase subunit TRM112 homolog A-like [Benincasa hispida]3.1e-6297.54Show/hide
Query:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP
        MRLLTHNMLSSNIKG++NGFPLRIEVEKVVEK VDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP
Subjt:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ETGRRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

TrEMBL top hitse value%identityAlignment
A0A5A7VD78 Multifunctional methyltransferase subunit TRM112-like protein5.9e-6773.26Show/hide
Query:  LFSSGCNHGAQPPFTPLPPF----------------------GRQKRRPASFER--------SEKMRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVD
        LFS G +HGAQPPF P PPF                       R  R    + R         EKMRLLTHNMLSSNIKGV+NGFPLRIEVEKVVEK VD
Subjt:  LFSSGCNHGAQPPFTPLPPF----------------------GRQKRRPASFER--------SEKMRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVD

Query:  FNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHEDEV
        FNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEA+ASMLDSHDFLQRFHHALLELHLEEGALICPET RRFPVNKGIPN+LLHEDEV
Subjt:  FNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHEDEV

A0A6J1GPK5 multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X22.6e-6297.54Show/hide
Query:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP
        MRLLTHNMLSSNIKGVVNGFPLR+EVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAE+ MLDSHDFLQRFHHALLELHLEEGALICP
Subjt:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ETGRRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

A0A6J1GQW1 multifunctional methyltransferase subunit TRM112-like protein At1g222707.5e-6297.54Show/hide
Query:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP
        MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASR MGYAELPEEAE+SMLDSHDFLQRFHHALLELHLEEGALICP
Subjt:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ET RRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

A0A6J1JT67 multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X22.0e-6298.36Show/hide
Query:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP
        MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAE+S LDSHDFLQRFHHALLELHLEEGALICP
Subjt:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ETGRRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

A0A6J1JUC5 multifunctional methyltransferase subunit TRM112-like protein At1g222707.5e-6297.54Show/hide
Query:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP
        MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASR MGYAELPEEAE+SMLDSHDFLQRFHHALLELHLEEGALICP
Subjt:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ET RRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

SwissProt top hitse value%identityAlignment
Q2KIA2 Multifunctional methyltransferase subunit TRM112-like protein3.4e-2745.9Show/hide
Query:  MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALIC
        MRLLTHN+LSS+++GV   GFPLR++  +V    V+FNPDF+  M  K+EW  L++A+  +   ++P+E       + +FL++ HH LLE+ + EG L C
Subjt:  MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALIC

Query:  PETGRRFPVNKGIPNLLLHEDE
        PE+GR FP+++GIPN+LL ++E
Subjt:  PETGRRFPVNKGIPNLLLHEDE

Q8LFJ5 Multifunctional methyltransferase subunit TRM112 homolog A7.0e-4973.39Show/hide
Query:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEA-EASMLDSHD-FLQRFHHALLELHLEEGALI
        MRL+THNMLS NIKGV +GFPLRIE   V+EK+VDFNPDF+++MF+KIEWK LV+ +R+MGYAELPEE+ +A++L S + FL++ HHALLELHLEEGAL+
Subjt:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEA-EASMLDSHD-FLQRFHHALLELHLEEGALI

Query:  CPETGRRFPVNKGIPNLLLHEDEV
        CPETGR+FPVNKGIPN+LLHEDEV
Subjt:  CPETGRRFPVNKGIPNLLLHEDEV

Q9C9R3 Multifunctional methyltransferase subunit TRM112 homolog B3.6e-4570.16Show/hide
Query:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEA-EASMLDSHD-FLQRFHHALLELHLEEGALI
        MRL+ HNMLS NIKGVVN FPLRIE EKV  K+VDFNPDFL+ MF+KI+WK LVD +R+M Y ELP+ A + + L+S + FL++FHHALLELHLEEG+L+
Subjt:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEA-EASMLDSHD-FLQRFHHALLELHLEEGALI

Query:  CPETGRRFPVNKGIPNLLLHEDEV
        CPETGR+F V+KGIPN+LLHEDEV
Subjt:  CPETGRRFPVNKGIPNLLLHEDEV

Q9DCG9 Multifunctional methyltransferase subunit TRM112-like protein1.0e-2847.54Show/hide
Query:  MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALIC
        M+LLTHN+LSS+++GV   GFPLR++  +V    V+FNP+F+  M  K+EW  LV A+ T+  AE+P+E          FL++ HH LLE+ + EG L C
Subjt:  MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALIC

Query:  PETGRRFPVNKGIPNLLLHEDE
        PE+GR FP+++GIPN+LL+++E
Subjt:  PETGRRFPVNKGIPNLLLHEDE

Q9UI30 Multifunctional methyltransferase subunit TRM112-like protein1.4e-2543.44Show/hide
Query:  MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALIC
        M+LLTHN+LSS+++GV   GFPLR++  +V    V+FNP+F+  M  K+EW   ++A+  +   ++P+       ++ +FL+  HH LLE+ + EG L C
Subjt:  MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALIC

Query:  PETGRRFPVNKGIPNLLLHEDE
        PE+GR FP+++GIPN+LL E+E
Subjt:  PETGRRFPVNKGIPNLLLHEDE

Arabidopsis top hitse value%identityAlignment
AT1G22270.1 Trm112p-like protein5.0e-5073.39Show/hide
Query:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEA-EASMLDSHD-FLQRFHHALLELHLEEGALI
        MRL+THNMLS NIKGV +GFPLRIE   V+EK+VDFNPDF+++MF+KIEWK LV+ +R+MGYAELPEE+ +A++L S + FL++ HHALLELHLEEGAL+
Subjt:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEA-EASMLDSHD-FLQRFHHALLELHLEEGALI

Query:  CPETGRRFPVNKGIPNLLLHEDEV
        CPETGR+FPVNKGIPN+LLHEDEV
Subjt:  CPETGRRFPVNKGIPNLLLHEDEV

AT1G78190.1 Trm112p-like protein2.5e-4670.16Show/hide
Query:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEA-EASMLDSHD-FLQRFHHALLELHLEEGALI
        MRL+ HNMLS NIKGVVN FPLRIE EKV  K+VDFNPDFL+ MF+KI+WK LVD +R+M Y ELP+ A + + L+S + FL++FHHALLELHLEEG+L+
Subjt:  MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEA-EASMLDSHD-FLQRFHHALLELHLEEGALI

Query:  CPETGRRFPVNKGIPNLLLHEDEV
        CPETGR+F V+KGIPN+LLHEDEV
Subjt:  CPETGRRFPVNKGIPNLLLHEDEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTGCGCTCGCCAGCGACACCCCCCTCTCTTCGTCTTCGCCGACAGCCTCCACACCACGCCGCCGATTCTCTTCCGCCCTCCGCCACCGGTAAAGCGCCGCCCTC
TTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCGGCCTTCTAACGTTGTTCTCATCGGGTTGTAACCACGGTGCACAACCGCCGTTCACGCCATTGCCACCGTTTGGTC
GTCAGAAGCGTCGACCAGCATCGTTTGAGAGGAGTGAAAAGATGAGGCTACTGACTCATAACATGCTCTCATCTAACATCAAGGGCGTTGTCAATGGCTTCCCTCTCCGA
ATCGAGGTCGAGAAAGTCGTCGAGAAGCAGGTCGACTTCAATCCAGATTTCCTCAAGAACATGTTCTCCAAGATCGAATGGAAGCCCCTTGTTGATGCTTCTCGAACTAT
GGGCTATGCCGAGCTTCCTGAGGAGGCCGAGGCATCGATGCTAGACTCCCATGATTTTCTGCAACGATTCCACCATGCACTTCTAGAGTTGCATCTGGAGGAAGGCGCTC
TTATTTGCCCAGAGACTGGCCGGCGATTCCCTGTCAATAAAGGTATTCCCAATTTGCTTCTTCACGAAGACGAGGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTGCGCTCGCCAGCGACACCCCCCTCTCTTCGTCTTCGCCGACAGCCTCCACACCACGCCGCCGATTCTCTTCCGCCCTCCGCCACCGGTAAAGCGCCGCCCTC
TTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCGGCCTTCTAACGTTGTTCTCATCGGGTTGTAACCACGGTGCACAACCGCCGTTCACGCCATTGCCACCGTTTGGTC
GTCAGAAGCGTCGACCAGCATCGTTTGAGAGGAGTGAAAAGATGAGGCTACTGACTCATAACATGCTCTCATCTAACATCAAGGGCGTTGTCAATGGCTTCCCTCTCCGA
ATCGAGGTCGAGAAAGTCGTCGAGAAGCAGGTCGACTTCAATCCAGATTTCCTCAAGAACATGTTCTCCAAGATCGAATGGAAGCCCCTTGTTGATGCTTCTCGAACTAT
GGGCTATGCCGAGCTTCCTGAGGAGGCCGAGGCATCGATGCTAGACTCCCATGATTTTCTGCAACGATTCCACCATGCACTTCTAGAGTTGCATCTGGAGGAAGGCGCTC
TTATTTGCCCAGAGACTGGCCGGCGATTCCCTGTCAATAAAGGTATTCCCAATTTGCTTCTTCACGAAGACGAGGTCTGA
Protein sequenceShow/hide protein sequence
MGVRSPATPPSLRLRRQPPHHAADSLPPSATGKAPPSFSLSLSLSLFLGLLTLFSSGCNHGAQPPFTPLPPFGRQKRRPASFERSEKMRLLTHNMLSSNIKGVVNGFPLR
IEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAEASMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHEDEV